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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:1034092..1038145+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12241.2.p1 ID=MSTRG.12241.2.p1|Name=MSTRG.12241.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4054bp|location=Sequence derived from alignment at sc0000091_pilon:1034092..1038145+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTGCCTTTTATGTAAGTGAAATCGTTTGAAGAGTTTAAAATGTCGCTAT
GTTGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaatatttgtttttcac
TCTGTATGGAGTTTACGTGAAATTTTACAAAGAATTTACGTCGATGATGC
AGTTAGCGTTAAAGAGAGTAAATACTGGTTGTTAACATTGATTTTAGCAC
TGATCGTTTTGGAAGGTGCTTATACGGTGATTATAAGGAAGGGCCACGAA
TATAAGTAGTAAGTATGAAATTTTAAAGTTCATCAGCTCATATCAGTCTA
TAGATGTTTTTCataatcaacaaaatttttccataggaaatcataatttt
tacaatctaaaaagaaaatataaacttGAGTTTCTTTAATGTGCCTTTTT
ATGGATAGATGAATAAACTTTCAGACTGAAGTCTCGAAATCTCTCTTGAA
ATCTCCTTAGCCTAGCTGCATacacttttttaatttaaaagaacaatgag
gctcaaaatcggcaaaaaataagaacaatttaagaacaatactgAGCTTG
AAATTActtaatttcaagcaatttaggggtcaaagtagcaAAAATTGGGT
ATACATTGAGTAGTCTGTAATTTAAAATTTACTTTATACTTTCAGTTTTT
GGCCCAGTGGATTTATTTACATTCTCATTATGATACCAAACACTTGTATT
CTCGAATCATTTCTTATGGATGAAGAAATCAAATGCACTGCATTATGGGA
ACAACAAAATCTGAATCCAAAACTTCAGGTAATTTTAAATctctccaaaa
tttcaaaagaaagaatTACTATGTATTATGTTTGTtcgatttttgttttg
ttattctgGATTTTCTCTTTGACACTGGTTGAACCACAGATACCTTATAA
AACACTAATAAAGCTTTTCTTAgccccgggggtactaggttcgcgaggtg
acgggtatgtccgagccaaagatCGACCCTTAAAGAGAGGGAAAATGGCG
TTTTGGGGACCCTTAGAATGACTTTTCCTAAAATGAGAGAGAAAAACTGC
GACGTTCttgcgacccttagagagacttttcttaaaattttcacccgatt
tttgtccaaatttttgaagttcACGACACTTTGAGAgaagaaatttagat
tttttgtgaattttgaacCCTTacaaagactttttaatggtttttgtgag
actttcgagggtgtgaaaaaggaaaattatataTGGTTGGTAGGTACAAG
TCGTTAGGTTGAGCGTAATTATAGAGTGTAGTCATTGGTGAGGTTATTAA
TTATGCTTAGAACAATTTCAATACAGTGTGTCTGTCGAGAAATTTCCGCA
ATGACAAATAAACTGGACAttggcacggaaagggttattAGTGTATCAGG
TTTTACTGTATATAAGATCTGTTTCTATTCTCCGGGCATACTATATACTA
CCGAATTTCTTATATGCGATAAACTTCGCACCACGATTTCTCTTTTCCTT
TACAGTATGACGAAGAACAAACAAGACTTTGTCTTGCAGCCAAATCAAAG
ATGAAGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGTTAGG
GGCTCTAGTAATGGGTCGTTGGTTATTGCCGAGAGGTGAATTGACACGTG
ATCAGTTATCTGCATTGCTATTGGCTTTCATTGGGAATGGAGCTGATTGT
ATTGGTAGGTTTTAGTATGCTCTGAACTTGAGGACTTAATGCATAGCACA
GGATTTACACAGCCTTATTCCATCAAATTTAAATCCCGCCAAATTCAATT
TACACCATGCATTCTCTAAATACTTTTTATTTCGGACCTTTTTAGCTTAT
TTAATAACGATTGTTGGCCAGAAATTTCCTACAACCACCAAATTCTAGCC
ATTTGCCAAAGTAAATTCCCTCTAAGAAACTTTTTCGACCATTCGTCAAA
TTGGATTCTAGCCAAAAACTTTCCTTGAAGGTAATTCATACCTATTTCAC
TCTCAGCCAAAATTCTTCACTGTTCCGATAGCTAtttagaaaaatgttta
atATTTTGGGGGTAACTTTCCATTGCTTCTTTAGTCACTCTTCCAAAAGT
CGAACCATGTACGAAACAAGTCCTTTAGCAtataataatctttttgtttt
ctagAATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATCGTCA
AGTAACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAATTTG
CTGTTGTTACCACCAAAACTACTGATGAATACAAAGAAGAAATTACTGAA
GATGACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACATTAA
TGGAAATCTAAAGGTATTAATATAATgacgatattttttataaatacaaC
CCAGATTTTGGACTCAGGGCTAGAGTTGCTTAGCCTTATTTGAATTTCTG
AAGAGCCTCTAAGATTATACCATATAATGTGCTTACTGGGCAAGGGATAT
CGGACAAAAAGCTTCTTTTGTTACGATGAAGTACAAAAGTTATCCTTCCA
ATTTTAGGGCCCGAGCCTTAAAGAACTGGTTGCTTATAGAGAATGTGTAA
ATTGTTGTTTAAAAGTATAACTGCTCTACTTTGTTTCATAATTTATTGCA
TCTTACATTTCTGCcttaaattttcaagatttacgAAAGCTTGAAGAAGT
AAAGgccaaagatgaaaaaaaaaaaaaaatccaattaaGAACtttttttC
CAATTAAATTAAAGGCCCTCTGGTTTTCCTAGTTCGCCAAACCCCCCAGT
cggtaatttctgtaattttcgTTAGGACTTGCGTATGGTTTCCAAAGAAC
AACATTTgggggggggCTCTGTAACCAGATGGGTAGACCTTGGGTGAAAA
TTTAATACTTTTTATATGTAAGTTAACAAACCTTTGTGTCTTTCAGCCTG
TTCGAACGAGTGCAAGTGGAGTACCACGCTACATTCGAAAAttgatgaaa
caaaaaagtaaaacacgTGCTTCATATCACGCTACACTTTCTTCAGTCAC
CCTAGCATTGAAAGATGAACGATCTAATACACTATCTATGCCGACATCAC
CTCAGCGATGTTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGAA
AGCAAACTGATGGATGATAACGTCTTTGAGGATGATCATTCTATTACAAG
AAGTCAAATTCCTCAAATTCCTCGACGTAAACAAGGTATAGGCAAGGAAT
TTtaatttatgatattcatgacgtaatgttttctacggaaagaccctgGT
TTTTGCGAGTAGtgaaaaattttatacaacttttgtctagtttaattTTG
CCACTACTAGCTAAGACCGGGGTATTTCCATAGAaagcattacgtcatga
ataaaacccttttatttaattttcttggtATAACATAACCGCGATATATT
TCGTGGATTGCAAAGAATATCTTGAATGAATATCCTTTTTCTTTGAACat
taaataagttttttttcatttccaaactcgaacccagtcctttAGTTCAC
TTTTTATCCTGATAATGCTCACGATTATtgtcaacctcgtccccgtgtat
tccaggctttatttatgttactgatagacgccagcaatgtcaattgaata
ctATACATTTCTAGTGACTATGAATAAAGaattctgacgttacaaagttg
cACTGCAATGCAAcggcttcaaaaaagaagaacgaatgaaatctgacgtt
ttgtttttggattacgtaatcttacacgttcgaaaaccagccaatgtcag
ggtattatctagcgctatcagtaagcaataaataaaaaaactaatactAC
ACAGAGAACGAGGCTGGATTATTGTATCAAGCCAGTCAGTAAATGACTTT
ATGTATGGGATTGATTCACTCCAAGGAGGATTTCTGCTGCCCCACATACT
AAATTTTAGGCCTCTGCTCATCCTCTTAAGGACAAGTTTCTTATAGAATA
TAAAAGTAGCTCTGCCAACTAGACTAAAGTATTTCGGTTTTTCTCTCTTC
CAAG Coding sequence (CDS) from alignment at sc0000091_pilon:1034092..1038145+ >MSTRG.12241.2.p1 ID=MSTRG.12241.2.p1|Name=MSTRG.12241.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6462bp|location=Sequence derived from alignment at sc0000091_pilon:1034092..1038145+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaatatt
tgtttttcacTCTGTATGGAGTTTACGTGAAATTTTACAAAGAATTTACG
TCGATGATGCAGTTAGCGTTAAAGAGAGTAAATACTGGTTGTTAACATTG
ATTTTAGCACTGATCGTTTTGGAAGGTGCTTATACGGTGATTATAAGGAA
GGGCCACGAATATAAGTATTTTTGGCCCAGTGGATTTATTTACATTCTCA
TTATGATACCAAACACTTGTATTCTCGAATCATTTCTTATGGATGAAGAA
ATCAAATGCACTGCATTATGGGAACAACAAAATCTGAATCCAAAACTTCA
GTATGACGAAGAACAAACAAGACTTTGTCTTGCAGCCAAATCAAAGATGA
AGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGTTAGGGGCT
CTAGTAATGGGTCGTTGGTTATTGCCGAGAGGTGAATTGACACGTGATCA
GTTATCTGCATTGCTATTGGCTTTCATTGGGAATGGAGCTGATTGTATTG
AATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATCGTCAAGTA
ACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAATTTGCTGT
TGTTACCACCAAAACTACTGATGAATACAAAGAAGAAATTACTGAAGATG
ACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACATTAATGGA
AATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTACCACGCTACATTCG
AAAAttgatgaaacaaaaaagtaaaacacgTGCTTCATATCACGCTACAC
TTTCTTCAGTCACCCTAGCATTGAAAGATGAACGATCTAATACACTATCT
ATGCCGACATCACCTCAGCGATGTTCGTCATATGAGTTTCGTACGCGCGC
GTTCACGCTGGAAAGCAAACTGATGGATGATAACGTCTTTGAGGATGATC
ATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTCGACGTAAACAAGGT
ATAGTGACTATGAATAAAGaattctgaATGTCGCTATGTTGGAGGTTTTC
TGCGGCCATTTTAAGTcgtttaatatttgtttttcacTCTGTATGGAGTT
TACGTGAAATTTTACAAAGAATTTACGTCGATGATGCAGTTAGCGTTAAA
GAGAGTAAATACTGGTTGTTAACATTGATTTTAGCACTGATCGTTTTGGA
AGGTGCTTATACGGTGATTATAAGGAAGGGCCACGAATATAAGTATTTTT
GGCCCAGTGGATTTATTTACATTCTCATTATGATACCAAACACTTGTATT
CTCGAATCATTTCTTATGGATGAAGAAATCAAATGCACTGCATTATGGGA
ACAACAAAATCTGAATCCAAAACTTCAGTATGACGAAGAACAAACAAGAC
TTTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCAGAAACTACGTGCA
GCTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGGGTCGTTGGTTATT
GCCGAGAGGTGAATTGACACGTGATCAGTTATCTGCATTGCTATTGGCTT
TCATTGGGAATGGAGCTGATTGTATTGAATTTCTAAATACCTGGAATGAT
TTTCCTGATTTACGAAATCGTCAAGTAACAGACACGGTCCTTGTTTTGTA
TTCGGTCAGTATTTTACAATTTGCTGTTGTTACCACCAAAACTACTGATG
AATACAAAGAAGAAATTACTGAAGATGACCAAAATTTGTTCGGCGAAGAA
ACCAGGACCAGAACAGACATTAATGGAAATCTAAAGCCTGTTCGAACGAG
TGCAAGTGGAGTACCACGCTACATTCGAAAAttgatgaaacaaaaaagta
aaacacgTGCTTCATATCACGCTACACTTTCTTCAGTCACCCTAGCATTG
AAAGATGAACGATCTAATACACTATCTATGCCGACATCACCTCAGCGATG
TTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGAAAGCAAACTGA
TGGATGATAACGTCTTTGAGGATGATCATTCTATTACAAGAAGTCAAATT
CCTCAAATTCCTCGACGTAAACAAGGTATAGTGACTATGAATAAAGaatt
ctgaATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgtttaa
tatttgtttttcacTCTGTATGGAGTTTACGTGAAATTTTACAAAGAATT
TACGTCGATGATGCAGTTAGCGTTAAAGAGAGTAAATACTGGTTGTTAAC
ATTGATTTTAGCACTGATCGTTTTGGAAGGTGCTTATACGGTGATTATAA
GGAAGGGCCACGAATATAAGTATTTTTGGCCCAGTGGATTTATTTACATT
CTCATTATGATACCAAACACTTGTATTCTCGAATCATTTCTTATGGATGA
AGAAATCAAATGCACTGCATTATGGGAACAACAAAATCTGAATCCAAAAC
TTCAGTATGACGAAGAACAAACAAGACTTTGTCTTGCAGCCAAATCAAAG
ATGAAGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGTTAGG
GGCTCTAGTAATGGGTCGTTGGTTATTGCCGAGAGGTGAATTGACACGTG
ATCAGTTATCTGCATTGCTATTGGCTTTCATTGGGAATGGAGCTGATTGT
ATTGAATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATCGTCA
AGTAACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAATTTG
CTGTTGTTACCACCAAAACTACTGATGAATACAAAGAAGAAATTACTGAA
GATGACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACATTAA
TGGAAATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTACCACGCTACA
TTCGAAAAttgatgaaacaaaaaagtaaaacacgTGCTTCATATCACGCT
ACACTTTCTTCAGTCACCCTAGCATTGAAAGATGAACGATCTAATACACT
ATCTATGCCGACATCACCTCAGCGATGTTCGTCATATGAGTTTCGTACGC
GCGCGTTCACGCTGGAAAGCAAACTGATGGATGATAACGTCTTTGAGGAT
GATCATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTCGACGTAAACA
AGGTATAGTGACTATGAATAAAGaattctgaATGTCGCTATGTTGGAGGT
TTTCTGCGGCCATTTTAAGTcgtttaatatttgtttttcacTCTGTATGG
AGTTTACGTGAAATTTTACAAAGAATTTACGTCGATGATGCAGTTAGCGT
TAAAGAGAGTAAATACTGGTTGTTAACATTGATTTTAGCACTGATCGTTT
TGGAAGGTGCTTATACGGTGATTATAAGGAAGGGCCACGAATATAAGTAT
TTTTGGCCCAGTGGATTTATTTACATTCTCATTATGATACCAAACACTTG
TATTCTCGAATCATTTCTTATGGATGAAGAAATCAAATGCACTGCATTAT
GGGAACAACAAAATCTGAATCCAAAACTTCAGTATGACGAAGAACAAACA
AGACTTTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCAGAAACTACG
TGCAGCTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGGGTCGTTGGT
TATTGCCGAGAGGTGAATTGACACGTGATCAGTTATCTGCATTGCTATTG
GCTTTCATTGGGAATGGAGCTGATTGTATTGAATTTCTAAATACCTGGAA
TGATTTTCCTGATTTACGAAATCGTCAAGTAACAGACACGGTCCTTGTTT
TGTATTCGGTCAGTATTTTACAATTTGCTGTTGTTACCACCAAAACTACT
GATGAATACAAAGAAGAAATTACTGAAGATGACCAAAATTTGTTCGGCGA
AGAAACCAGGACCAGAACAGACATTAATGGAAATCTAAAGCCTGTTCGAA
CGAGTGCAAGTGGAGTACCACGCTACATTCGAAAAttgatgaaacaaaaa
agtaaaacacgTGCTTCATATCACGCTACACTTTCTTCAGTCACCCTAGC
ATTGAAAGATGAACGATCTAATACACTATCTATGCCGACATCACCTCAGC
GATGTTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGAAAGCAAA
CTGATGGATGATAACGTCTTTGAGGATGATCATTCTATTACAAGAAGTCA
AATTCCTCAAATTCCTCGACGTAAACAAGGTATAGTGACTATGAATAAAG
aattctgaATGTCGCTATGTTGGAGGTTTTCTGCGGCCATTTTAAGTcgt
ttaatatttgtttttcacTCTGTATGGAGTTTACGTGAAATTTTACAAAG
AATTTACGTCGATGATGCAGTTAGCGTTAAAGAGAGTAAATACTGGTTGT
TAACATTGATTTTAGCACTGATCGTTTTGGAAGGTGCTTATACGGTGATT
ATAAGGAAGGGCCACGAATATAAGTATTTTTGGCCCAGTGGATTTATTTA
CATTCTCATTATGATACCAAACACTTGTATTCTCGAATCATTTCTTATGG
ATGAAGAAATCAAATGCACTGCATTATGGGAACAACAAAATCTGAATCCA
AAACTTCAGTATGACGAAGAACAAACAAGACTTTGTCTTGCAGCCAAATC
AAAGATGAAGGATGATCAGAAACTACGTGCAGCTATTGAAATTGGAATGT
TAGGGGCTCTAGTAATGGGTCGTTGGTTATTGCCGAGAGGTGAATTGACA
CGTGATCAGTTATCTGCATTGCTATTGGCTTTCATTGGGAATGGAGCTGA
TTGTATTGAATTTCTAAATACCTGGAATGATTTTCCTGATTTACGAAATC
GTCAAGTAACAGACACGGTCCTTGTTTTGTATTCGGTCAGTATTTTACAA
TTTGCTGTTGTTACCACCAAAACTACTGATGAATACAAAGAAGAAATTAC
TGAAGATGACCAAAATTTGTTCGGCGAAGAAACCAGGACCAGAACAGACA
TTAATGGAAATCTAAAGCCTGTTCGAACGAGTGCAAGTGGAGTACCACGC
TACATTCGAAAAttgatgaaacaaaaaagtaaaacacgTGCTTCATATCA
CGCTACACTTTCTTCAGTCACCCTAGCATTGAAAGATGAACGATCTAATA
CACTATCTATGCCGACATCACCTCAGCGATGTTCGTCATATGAGTTTCGT
ACGCGCGCGTTCACGCTGGAAAGCAAACTGATGGATGATAACGTCTTTGA
GGATGATCATTCTATTACAAGAAGTCAAATTCCTCAAATTCCTCGACGTA
AACAAGGTATAGTGACTATGAATAAAGaattctgaATGTCGCTATGTTGG
AGGTTTTCTGCGGCCATTTTAAGTcgtttaatatttgtttttcacTCTGT
ATGGAGTTTACGTGAAATTTTACAAAGAATTTACGTCGATGATGCAGTTA
GCGTTAAAGAGAGTAAATACTGGTTGTTAACATTGATTTTAGCACTGATC
GTTTTGGAAGGTGCTTATACGGTGATTATAAGGAAGGGCCACGAATATAA
GTATTTTTGGCCCAGTGGATTTATTTACATTCTCATTATGATACCAAACA
CTTGTATTCTCGAATCATTTCTTATGGATGAAGAAATCAAATGCACTGCA
TTATGGGAACAACAAAATCTGAATCCAAAACTTCAGTATGACGAAGAACA
AACAAGACTTTGTCTTGCAGCCAAATCAAAGATGAAGGATGATCAGAAAC
TACGTGCAGCTATTGAAATTGGAATGTTAGGGGCTCTAGTAATGGGTCGT
TGGTTATTGCCGAGAGGTGAATTGACACGTGATCAGTTATCTGCATTGCT
ATTGGCTTTCATTGGGAATGGAGCTGATTGTATTGAATTTCTAAATACCT
GGAATGATTTTCCTGATTTACGAAATCGTCAAGTAACAGACACGGTCCTT
GTTTTGTATTCGGTCAGTATTTTACAATTTGCTGTTGTTACCACCAAAAC
TACTGATGAATACAAAGAAGAAATTACTGAAGATGACCAAAATTTGTTCG
GCGAAGAAACCAGGACCAGAACAGACATTAATGGAAATCTAAAGCCTGTT
CGAACGAGTGCAAGTGGAGTACCACGCTACATTCGAAAAttgatgaaaca
aaaaagtaaaacacgTGCTTCATATCACGCTACACTTTCTTCAGTCACCC
TAGCATTGAAAGATGAACGATCTAATACACTATCTATGCCGACATCACCT
CAGCGATGTTCGTCATATGAGTTTCGTACGCGCGCGTTCACGCTGGAAAG
CAAACTGATGGATGATAACGTCTTTGAGGATGATCATTCTATTACAAGAA
GTCAAATTCCTCAAATTCCTCGACGTAAACAAGGTATAGTGACTATGAAT
AAAGaattctga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091_pilon | genome | sc0000091_pilon:1034092..1038145 + |
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