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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:896891..902080- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12228.1.p1 ID=MSTRG.12228.1.p1|Name=MSTRG.12228.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5190bp|location=Sequence derived from alignment at sc0000091_pilon:896891..902080- (Clytia hemisphaerica_ch_hm2_pilon)
ACCCCTCCCCCTCCAATACCGAGCATCTACCAGTATTTTTAGAGGTCTCT
CAAAGCAGTTAGCGTGATGTCGTGATAGGGATATTCTCCAGCGTGATTCC
ATGATAAGGAATTTTTTTTTCTATAGTGATTTTGTGATCATCGGTCAAAA
CGTGATCGTGATATGAAAATTGTTTGAGCCGTGATGCGGTACTCTTTTGA
AAGGGATGCGTGATCATTTCAAGTTTTTTTTTGCTGATTTGCGTGATCTT
GTTTGAAGACAAAGAATTGCGTGATATCGTGATCAGAGTTACTGCTGGGG
AGACTCTTTTTAAAAACTGAGACAAAAGAATTGGTGATTTCAGGAAATTT
TCATTCAAAGCCTGCAAAATGTTTTGCCAATTTTGAAATGTTAAACAAAA
ACCCAAAAATCTGGTCCTAGATTTGAGGCCATCTTGTTCATGCAATTCCG
GGCAAAAGCCGAAATTCATGATAACTACAACCCAATCTTTTGTACGGAAA
CACCTCTGTTTCTGCAATTCACTCGTTAGAGACAAATTTAGGCGTAAGTT
TTTCAAGAATCTTGTATGATTTGTCTTTTTCCTTTGACGGACTCATTTGC
AGACAAAAGACGGTACCCAAGATTCACGCAAATTACAAGCTACTTTTTTC
CAGTTCTGAAATCCTTGGTTCCCCTGAACTTTCACAACAAATATTTTTAA
TTAATTTCCAGTGTTTTCTCTCAAATTTTGCTACCCATTTTCAGACGGGT
AGCTCTTAACTTCTCTTTGATCGACAACACTTAGACTTTAAACTTTTTAC
AGTATTGTTTAAAAAAAATCAGAGGAAATCGATTTTCCTTTAAGTTGATT
TGTAAAGAAAAGTAAGTGTCGGCATGCAAATTAAATGACCCTGCGTGTGC
AAAAATTCTTCTTTCATGGTTTGGCAACTTTGCGCTTTAGAAAAACACGG
AAAGAAAAAATAATATTTTTCTTCTCAAGATCTGCTAGAAAGATGGCGCG
CCAAAGTCGTTGTATTAACACGTCGCTTTCTTGACAAAAAGTTTTGTGGT
TTCAATAAACGTTTTATATTTCATGTCCGAAGTGTTTTAGTCCAAAAGGG
CATGCTTTGATTGTCTAAGATGCCACGTGGAAAAAGCATGATGGCGCAAT
TCGAACACAAGATCGATACAAAGATCGACTGCACATTTGATTTGAAATGA
GAGACTGGTGTTATCAAACAAGGGGTCGAAATGATCCCAAAAATGTGAAT
TTTAATTCTATTTTGACTAAATGGACTACTTTGAAAGTTGTTATGAATTG
TTCTAAATCAAAATTTTGGTTTAAAACAAAATATCTGAAATCTGACGCAT
AGAAAATACCTTGCCGACCGACACGGATTCCAAAATTCCAAAATTTTCTG
AAGATTTTCCACTTTTTTGCAAAAATCCTCCATACTTCTCCTAACCCAAC
CCGTAACCCTTTTAGTCCAAGTACCCACCCCGAGTTGTGGGTTACAATAC
ATGACGTATTGTCATCATTTTCATGACGAAATGACGGCAATTGTTAAGAA
TATTTTAATGAACAAATCTCTCTACTCTGGAGAAGAACTATGCAAAACCC
AAATGCTCAGCTTCCCAATATATCCTCCGTTGATAAAGACGACAAACCTT
TTTTTCAATGATAAAAATATTGAAAAGAGGCAACTTTTCCCTGAATAAAA
ATTGACCTAATAGTAAGGTTTTCTAATTTTAGTCGTCTAATCCTTTTCGA
ACAGTCACCAATTGTTGGCATTTTTAAAATTCCGTTCCCCGGCTTATTTT
CTTTATGAAATCCCCTAAATTTTCTATTTTTTAACTTTGATAAAAAACCA
CCCTTTTCCAAAAGTCCTATAGTCCCGCAGGGAGTCCTTAATTTTCGAGA
AATTGGCCAAAAAAATCCCCGATGAGATCCTAAATTTCACTCACATTGCA
AAAACTTACACTCATAAAGTTACTGTATATTTGACAATCCCCCTTCATAT
CCGAGTTTAGAATCCCTAGTCAATAAAAAACAGGTGATTTTTTCACTAAT
TGACACTTTAAATCATTTATCACTAATTCCCAATAGGTTCTTGAAACAGG
GATGTCGATAGAGAAATTAAGGGGAGTTTTACCTGGGGTGTAAATATCAA
TAATATTTCAGAAACAATTTATTCGATTCCTCAAATTTTGAAATTATGCA
ACGCACAATGCGTTGCATTTTTTACATAGAATTTGGCAACTCAACTGTCA
TTGTTTGTGTAAAATCACTTCGACGAAAAATGACCCATTTATTGACCAAA
TATGGTATGAAATATACATCTCAAAATCTCACTTATTGCATTCAGAATTG
CCCAAATTAAAAAATGTCACATGCTTAAAAAGTTTTCCCAGTGAAAATCC
AAATGTCTAAGAGTTTGAACTGAGACACAATGAACCTTAAAGTCTAAAGT
TCAGCAATCAATCAACTGAAGGTCTTGTGACCCAAAAAAAGTAAACTTTG
GTTGAAATAAAGTTAGAAAACTGTATGAAATTACCTGCTCCAAAGAATGT
TATTGAAATGTAAAAGCTTAAAAAATAGAAAATAGGATAAAATAATAGCA
AGCAAATAAAAATTCAAGCTAGACATCTCATACAACCCCAGTGGGGTGTC
AATTTTTTCCAAATATTGTTTGATCCCAGTATAGCTCTTCTCATATAAAC
ACAAAGATTATCTTCAATACGTTAAAATTATCCTAGGGAAACAGCATCCC
TTTTTGAAAAATTCTCCTATGTTCTTCTGGTTGTCGAATTTCAGTATCTC
GGCACAAAAAAAATGTCGAAAATTTGAAGAGAAAGAGCTTTTTTTCTTAA
ACTGGAAGGTTCTGGTCAGCTTCACAGCCTGTAGCGACATAAAAGCACTA
TTAAAATCAGATTGTGTTCATCTCTCCTCTTTTATACACTTTAAGGTGTC
TATCATATTACAAAGAAAACATGACAAGAGTCAGTGTCATATTTGCAAAG
CATTCTGGTCTCACGTGGTGGTTTCGAATTGCATTTCCGATCGTGGTATA
AATAGAACGAGTAGTAGGAGATTTTGAAGCATGGCGGCTTTGCTTCATCA
AATCAAGAGTTCTCTCTTTAACAAAATCATCGTGTGATTTCTCTACACCT
TTGGATCAGTTCTACACGTCATCGTCGACATTTTATCAACTGTTTCAAGA
ATATTTGACCATATATCTTTATCTTTAGTAAGGTGAGTGCTACAAGTATC
TACTTTATATACTCCTGTCAATCATTTGCTTAAACATGTACAAAAGTTTT
TTAATTTAATAATGGAAAAATGGATACAAATGCTGCTATGCCATTCAAAT
TTCCTCAGTGAATTAGGCAAATATTTCTTATTTCTTCACATATATACTGT
ACCACTCTTTCCACCCACTCTTTAAAAATTAACCAATTTGACGCCAGTTA
GATTTCAATTGCTACGCTTTTCCCACGAGGTCTAGATAATTACTTTAGTT
GGGGGAAATAAATGTGGAAATTCTACTTTTAATTATTTAACAAACTAAAT
TAAATAAATCATGACTATGATTTCCAGGTCATTTTCGAACAAGATTATTA
GCCAAATGTAGTTGCATGAGCTTTTAAAGACCCATACATAAATCATACAA
AAACAAACAATACTCTTCATTCATTTTTATAGTCTGGTAAAATCACATCA
CAATGCCTCCAGTGACGAACGAAGGATCCAAATTGAGAAATGACACTCAC
ACCAAGAAGAACTATGGATCCAATGAAGACATTGGAAGTTACCAAGAATC
GAATGATGCTTATGTTGTCAAGGAGGACCGATACAACCTTGGTTATCTAT
CATTTTTCCTGATCGGTATTGGAATGTTACTACCATGGAATTTCTTCATC
AACGCTGACCAGTACTTTAAAAGCAAACTGAAAAACAATGAAAGTGATTT
GAAATTGTTCGAAAGTGCTTTTTCAATTTGCTCACAAATTCCCTGCGGTA
TTGCATTGATTATCAATTTATGTTTGACAAATCGAGTTTCCAGGAACGGT
CGTGTCATCTCAACGTTAATCATCTCGACAATCTGTTTCATTGTCACCAC
AGTGCTGGTCAATGTGGATACTTCAGCTTGGACTGATAAATTCTTTGCAG
TCACTTTAACCAGCGTTGCAATCATCAATGCATGTTCTGGAATCTTCCAA
GGAACCATCTTTGGAATTGCCGGAGCTGCAGGAGGACGATACATCCAAGG
AGCAGTTGTCGGTATGAGCTGTGCTGGAACCTTCGCCTCTATCACCAATA
TCATCTCCTTAGCTGTTGGTGATGATATCAAATTAGATTCAACTATCTAT
TTCAGTATCGCTTCTCTGGTTTTGTTCACTTGCATATTTGTCTACATTGG
TATGTTTCGATTACCAGTGTTGAAAGATAAATTTGAAATCAAACTTTATG
ATGATAAAATGTCCAGTACTTCATCAACCAGCAGTGGAGAAAACGATTGT
ACTGGTGAACAAAGCTTTTGTGCCGTCATTCGTAACATCTATCCGACAGC
ACTATCCGTCATGTGTGTTTTCGCCGTCACCTTGACTATCCAACCCGCCA
TTTTATCCGGTATTCGATCAGTCAATGAAAGCAATGGATCCGCATTCACT
AATAAATATTTCACGGCTGTTGTTGGATTCTTGATTTTCAACGTTGGTGA
TTTTGTTGGTCGAATCATCTCTGGTTTCGTTCGAATAGTTGATAAGAAAG
GACCCTGGTTACCAATCCTCTGTGTTGCTCGAATTGCATTCATCCCACTG
TTCATGTTCTGTAATTTCCAACCACGTCATCACTTAACAGTTGTCTTCAA
TAAAGATATCTATCCTGTCATCTTTAATATCCTTTTCTCCGTCAGTAATG
GCTATCTCGCTAGTCTTTGTATGATGTACGGTCCGGAGCGTGCACCTGAA
GGGATGATGGAGACAGCAGGTGCAACCATGCAATTATTTTTGACAATCGG
ACTTGGTTTAGGATCAGTTTTATCCTTAGCTATTGTAGATACAATCTAAT
GATAGGCGTTATGATATTTGAGTCTTTCAGTACACATTTTTTATAAGAGC
ATCAAAAGATTTTGAAGACTTCGAATGCTGTTAACTTTTTGAGTTCTAAG
CCTAAAAATGTTCTTAACATGTTCTTATTTTGACTATTTT Coding sequence (CDS) from alignment at sc0000091_pilon:896891..902080- >MSTRG.12228.1.p1 ID=MSTRG.12228.1.p1|Name=MSTRG.12228.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1347bp|location=Sequence derived from alignment at sc0000091_pilon:896891..902080- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCCAGTGACGAACGAAGGATCCAAATTGAGAAATGACACTCACAC
CAAGAAGAACTATGGATCCAATGAAGACATTGGAAGTTACCAAGAATCGA
ATGATGCTTATGTTGTCAAGGAGGACCGATACAACCTTGGTTATCTATCA
TTTTTCCTGATCGGTATTGGAATGTTACTACCATGGAATTTCTTCATCAA
CGCTGACCAGTACTTTAAAAGCAAACTGAAAAACAATGAAAGTGATTTGA
AATTGTTCGAAAGTGCTTTTTCAATTTGCTCACAAATTCCCTGCGGTATT
GCATTGATTATCAATTTATGTTTGACAAATCGAGTTTCCAGGAACGGTCG
TGTCATCTCAACGTTAATCATCTCGACAATCTGTTTCATTGTCACCACAG
TGCTGGTCAATGTGGATACTTCAGCTTGGACTGATAAATTCTTTGCAGTC
ACTTTAACCAGCGTTGCAATCATCAATGCATGTTCTGGAATCTTCCAAGG
AACCATCTTTGGAATTGCCGGAGCTGCAGGAGGACGATACATCCAAGGAG
CAGTTGTCGGTATGAGCTGTGCTGGAACCTTCGCCTCTATCACCAATATC
ATCTCCTTAGCTGTTGGTGATGATATCAAATTAGATTCAACTATCTATTT
CAGTATCGCTTCTCTGGTTTTGTTCACTTGCATATTTGTCTACATTGGTA
TGTTTCGATTACCAGTGTTGAAAGATAAATTTGAAATCAAACTTTATGAT
GATAAAATGTCCAGTACTTCATCAACCAGCAGTGGAGAAAACGATTGTAC
TGGTGAACAAAGCTTTTGTGCCGTCATTCGTAACATCTATCCGACAGCAC
TATCCGTCATGTGTGTTTTCGCCGTCACCTTGACTATCCAACCCGCCATT
TTATCCGGTATTCGATCAGTCAATGAAAGCAATGGATCCGCATTCACTAA
TAAATATTTCACGGCTGTTGTTGGATTCTTGATTTTCAACGTTGGTGATT
TTGTTGGTCGAATCATCTCTGGTTTCGTTCGAATAGTTGATAAGAAAGGA
CCCTGGTTACCAATCCTCTGTGTTGCTCGAATTGCATTCATCCCACTGTT
CATGTTCTGTAATTTCCAACCACGTCATCACTTAACAGTTGTCTTCAATA
AAGATATCTATCCTGTCATCTTTAATATCCTTTTCTCCGTCAGTAATGGC
TATCTCGCTAGTCTTTGTATGATGTACGGTCCGGAGCGTGCACCTGAAGG
GATGATGGAGACAGCAGGTGCAACCATGCAATTATTTTTGACAATCGGAC
TTGGTTTAGGATCAGTTTTATCCTTAGCTATTGTAGATACAATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091_pilon | genome | sc0000091_pilon:896891..902080 - |
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