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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:647178..652312+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12211.2.p1 ID=MSTRG.12211.2.p1|Name=MSTRG.12211.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5135bp|location=Sequence derived from alignment at sc0000091_pilon:647178..652312+ (Clytia hemisphaerica_ch_hm2_pilon)
agcatTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGCTATA
AGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTGTTTT
CTGAGGTGAGTTAGATTATTTTGAACCAAAGATCTTGCCTGGATCTTTCA
CAGTTAGTTATCCATCGCTAGAGAGATTAGTTTcatagttttatttttct
ttttttttctcagacaacaattttgaaaaatgaccagTAGCAGTAATTTA
CTGACTTTACTAGTTGACTTTGAAAAcaacttatttttctttttaggtgG
TGGCAAAAAACCAATCTGAAATTACTACTAATTCCCAAGAAAAGGCTAAA
GATCAAACAAAGGCAAAAGATAAAAGGTTCAAATAAGTTTAATGATACAG
TGCtgtatttgttttgttggtAATTGAAGTCCACATAGTCATAAGGAGTA
ggaccattccagggcctagtACCTAAAGAAGAACTAGAcattttttttgg
gaaaggtTTATGTAAAAATGTTACGTTCAATTCATTAAGCACATTTTATA
ACTAACTTATTCATTATAGAAAAGACCACTGGTTATTTGCTGTTAGAGAG
GTATACTTTTGATAGACAttgtatttcattttcattcttttcattCGTTT
GAGTTGTTCATTAAAGAATATTGTTAGCTTTTCTTGAGACACtccaataa
ttttgaaaacagACCAACCAAAATGCACCAGAAAGAAATTCTCATAGGCT
TTTCAACTCAtggctattttgaaaaaaaaaatttatttgattaatTCTTT
ACAAATTGTCTCGAAATGGGCAGAATAGTGAAAGTTTTTTATGTCTGCCC
TTGGTGTTATTTTTGGGCCTGTTTAGTGGTATTTGCAGGTTTTGACGTGT
TTATAACCTCTATTAGCGTAAGCTCAAAATTGGGCAATGGCAAATGAAGG
GCCGGCGTTTACTTTGGGCTGGAGTAAGGTAGGCGGTAAATTACACTTGA
CAGGAATAATATTTAATTTGTTAACTTTTGCTATAGGGTGCACCACCAAA
agagaaacaaaagaaatcactCGTTCAAAACGTGGAAGAGGTGACCGAAG
CTTTCAATGAGCTCGCCAAAAATATTCGAGAACATCAGGAGAGTATTTCA
AATGTGCATGGAGTAGGGACTATACATACTGATTTTGGAACGTTGGGTAC
TGATGATGTCAAGACTCTCTTCAAAGATGATTGTCCacaattcaaaactt
ttttcagtGACGACTTTTTCAGAAGtgagttttatttaattttctggCTA
AAATAAAGTAAGTCATTTGAAGGAATGTGTATTCCTTTTTAGTTCAAAAG
CGTAGGAAAGAACACTGGACTAATTTTACCATAATTACAAGAATATTTTA
ACACTCTGCTGTGTATGCTACAGTTCTTTTACATTGTTACCCCTTCAAAC
CCGAGTGACGTGTATACACGCTCCAAATTAGCAAATATACCGTGTTCCAG
ACTTAAGGCTAAAACGCTttaccacttgatttaaaaggtCGTAACAAGCT
TTCCTGTCATGTcagtttgaagtttttaaaaaatttcacacttaaaaaaa
aaacgttgtgCACTGGAAAGGTTAATAAAAAACCAGTTTATGTTATTATC
GACTGACTAATATTTCTACCATTTTAATTATTTCCAATAATAGCTAATAT
CGAAGTTCCGAAGCCGAAATTGACGGAAGTAGACCTCTCATCTTGGTTGC
AACCACAGCAACAACAAGGTTCGCGTCTCCGTCTACAACGTAAAGCCAAA
ACAAAAGAGAAACGTTACGCTCAACTCATATCTGATGACGACGATGACGA
TTTTGAAGAAGTAACACCAagtaaaaagagaaagaaaactgaaaataaaa
attataacatCAATAATAAAGCTATTGTCCAGCATGAGGATGGTTGCATG
AGTATTGATATCATTACcgatgatgatgaagatgaaaatcagCAAACAAA
CACCAAAAGTAAAGATGATCAGAACAGCATTGGATCAACTTtgacagaaa
aaatcaagaatgtAGTCAAGAGACCAATACAAACCATCACTGACATATGG
AATAAGAAATCAGACACTAATAACAATGGTCAAAGTCACAATGATGGTGA
AGGAAGTCAAAATAGTATTCAAAGCAATGACAGGTATCCCATTTCAGGAT
TACTCTcttaggtatataataaaaggCTGGTCAAAAATTAGTGACTAAAA
TCACGCTGTTCAGAGAAAAgtaaatgaattttattttatcgCTGAAACGC
TTCTTCAAATTGCGAGACAGGCGTCGTTCTGAATTAAACGTATAAAGGTT
TTCCATGTTTTATGggttaagttacgtaacttccaccattatggaagcaa
acttTCGATTTGTGTAAGGAATCATCTCCTCAGATTGGAACGTTTGCTTC
CGTAATGGCGAGAGTTAGATTACTTAAGGGGGCCCCAGCGGcttgtgtga
atgcgtgaatgcgtgaaaaatGCGTGAATTGGCAAGCTTTGCATGAACAT
GAATTGCGAAAAtacattgcgtgaatgcgtaaatttgggaaaaaaattgc
gtgattgcgtgaattgaaggtccgctggagggggggCTCACTTAACAAAA
CATGGTAAACCTCTACATGAACATTGTTGAAACTTTTGATTCTtgattca
ttcatcatttttctagtccaacaaaatcaaagaaagaaacgGAAGAGAAA
GTAGAATGTCCAATGTGTGCCAAGAAGTTCCCAACGAAAGATGTCATGGA
CCATGCGTTCTATTGCGATGGAGTCAAGGAAACTCGATCAACGAGGTGAG
TGCAATCTCTTGCTTTGTCCAAGCATTTACCtccacggggggggggtttc
agggggtacccgattccgtaattccgccaattttttctccaatttccgtc
aaaccgtcttaaattgaacaaaaattccgtcaccgaaaattcctttgaaa
ttcaatatttttgtcgaaaattccgcaaattttgaaaatcttttaccaat
tccgaaattccgcaaatttttttgctaaattccgtttttccgcactaaaa
ttgtctaatttgccgtctccgtcagagaacccaatttccgtaattccgtc
taaattttcgccaaattccgccactccgtccgaaaaaagggccgattccg
ctcctccgccaaccatgaaaccccccccccctccactTTTTTCGGGGAAA
AATATCTTGAAACTTTTGCGAGTTAAAACCAATACAGACTTAGCTGAAGA
CAGTTAAAACTTATCCAGTAGCCTCTTTTTCGTCATAGCTAAACTCGTTC
GGACTGTTGAATTACACTCTCCCTTTTTTGGTTTGAATCCATTGTCTCCG
CCAAAGCCCGCCCAGTTTTGTTTAAacacaaaaatagttttaaaaaaatt
caaagtgagGTTTAGTGGTTGTAGTACCAAGAGCTGTTACAATGAGTTTC
AAGGGAAATATTGGATTTAGTTTCATTAAATTTCTATTAATTTTATATTC
CTTCTACATGAATCCACAATCTAGAATATTTAAGAGAACTGATCAAAtac
ctttttgttttgttttaacagGTCGAGCTCCAACGGGAACGGTAATAATG
ATTAATTAGTTGAATCATCAgacatttttgagtatttttaagttttgatc
AATTGCGGTTTTAATATGTACTAAAGcctttgtttcaataaaaatctttt
atgGGTATTAATTTGACATATGAGAAAGTCCCGAATGttttaatacacgt
ttttttttttaagaaactagttttaccaagcagcctcaatgtttcttaag
aaatcagccttttgagccttaaatgtttcttacatgtttctaaacttttt
gacataatcagcctatttttcatgttttgattggaaggttcttaaaaaaa
cttcattttctcattttcagcctcagtatgtttcttagatgtttcttagt
ttttaggcattctgagcctcatgtttcttaaaagtgtgtttcttaaaaaa
aaaaaacgtgtaaccaaTATGATCATTTCTAAAAGCCATAAGATTTACTC
GACTTACTACAAGTTCATGGCTAAATCAACATTATGTCAATTAAGTTTTC
TAAAAGCTATACCATGGTTTCATTCATTTCAGCTTCAACGGGGGACTACC
AAAACTGGGTGggtgcttgtcactcgttaaaTGAAAAACCTGCTAGCAGT
TCTGGAGCGTCAAATTCCAAGATACCAGTGGAACTACCtgaattttctgg
aaaaaagaagaaaaaaccatCAGAAAATTCGTTCCGTGGACCAAAACAAC
AATTTGCAGAACCGGCACCTCAACACCCTTATACTACAAACACTTCAAAT
GTTTTTACAAAGTTAAAAGATGACGGACCCAAAGAACGAAACCCAACATT
AGACGACGGTTTTGGTGACAGTCAAGAGGATATTATAGCCGGTTATACGA
CTGTCCGCCATCGAAAACCAAATAGAACATACGGGCGTGGTGGTAGGCGG
AAGAACTATTTCGATCATGAGAATAGTCAAGGAGACGGTGGGACAATAAA
ATGCGCACGATGTAGTTTATCTGTTCCAGAGGAGAGATATAAAGAACATA
CGGACAATTGTCTTAATGAATCCACTCTCTCATAAGATTCTTGTTGTTTA
TTCAACCCCGTTGCGAACCCTATAATTAGTAAGTGAGAACAAATCGCTGT
CATACACAGTGAAATCTGACATTTCTTTACCGACGTCATTCAAGTACAGT
TGTAATTATGACCTCAAACTGAGATGAAAATACGTCACTGGAAATGAACC
AGTTGAAATGAtttattcagtttcaaaatatattatttaaaatCTTCTGT
TCGTATGCAGCATTTTCTTTGATAGTCGATAATGTTGGAAAGTAAGGGTA
GTGGAAGGTTTACCTCTTTTTGTCGTGTTTTGGTTATTCACTCTTCTTTC
ACATTTCACACTGtaaatattatattttcttcTACGTAGCTTTTGATATA
TATTCAcaacgaaaaaaagaaatttttaaagaccACATCAATTTAATTCC
AGTTGAAGTTTTTACCATCATTTGAAGTTACTTTC Coding sequence (CDS) from alignment at sc0000091_pilon:647178..652312+ >MSTRG.12211.2.p1 ID=MSTRG.12211.2.p1|Name=MSTRG.12211.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3552bp|location=Sequence derived from alignment at sc0000091_pilon:647178..652312+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTATTGATATCATTACcgatgatgatgaagatgaaaatcagCAAAC
AAACACCAAAAGTAAAGATGATCAGAACAGCATTGGATCAACTTtgacag
aaaaaatcaagaatgtAGTCAAGAGACCAATACAAACCATCACTGACATA
TGGAATAAGAAATCAGACACTAATAACAATGGTCAAAGTCACAATGATGG
TGAAGGAAGTCAAAATAGTATTCAAAGCAATGACAGtccaacaaaatcaa
agaaagaaacgGAAGAGAAAGTAGAATGTCCAATGTGTGCCAAGAAGTTC
CCAACGAAAGATGTCATGGACCATGCGTTCTATTGCGATGGAGTCAAGGA
AACTCGATCAACGAGGTCGAGCTCCAACGGGAACGCTTCAACGGGGGACT
ACCAAAACTGGGTGggtgcttgtcactcgttaaaTGAAAAACCTGCTAGC
AGTTCTGGAGCGTCAAATTCCAAGATACCAGTGGAACTACCtgaattttc
tggaaaaaagaagaaaaaaccatCAGAAAATTCGTTCCGTGGACCAAAAC
AACAATTTGCAGAACCGGCACCTCAACACCCTTATACTACAAACACTTCA
AATGTTTTTACAAAGTTAAAAGATGACGGACCCAAAGAACGAAACCCAAC
ATTAGACGACGGTTTTGGTGACAGTCAAGAGGATATTATAGCCGGTTATA
CGACTGTCCGCCATCGAAAACCAAATAGAACATACGGGCGTGGTGGTAGG
CGGAAGAACTATTTCGATCATGAGAATAGTCAAGGAGACGGTGGGACAAT
AAAATGCGCACGATGTAGTTTATCTGTTCCAGAGGAGAGATATAAAGAAC
ATACGGACAATTGTCTTAATGAATCCACTCTCTCATAAATGAGTATTGAT
ATCATTACcgatgatgatgaagatgaaaatcagCAAACAAACACCAAAAG
TAAAGATGATCAGAACAGCATTGGATCAACTTtgacagaaaaaatcaaga
atgtAGTCAAGAGACCAATACAAACCATCACTGACATATGGAATAAGAAA
TCAGACACTAATAACAATGGTCAAAGTCACAATGATGGTGAAGGAAGTCA
AAATAGTATTCAAAGCAATGACAGtccaacaaaatcaaagaaagaaacgG
AAGAGAAAGTAGAATGTCCAATGTGTGCCAAGAAGTTCCCAACGAAAGAT
GTCATGGACCATGCGTTCTATTGCGATGGAGTCAAGGAAACTCGATCAAC
GAGGTCGAGCTCCAACGGGAACGCTTCAACGGGGGACTACCAAAACTGGG
TGggtgcttgtcactcgttaaaTGAAAAACCTGCTAGCAGTTCTGGAGCG
TCAAATTCCAAGATACCAGTGGAACTACCtgaattttctggaaaaaagaa
gaaaaaaccatCAGAAAATTCGTTCCGTGGACCAAAACAACAATTTGCAG
AACCGGCACCTCAACACCCTTATACTACAAACACTTCAAATGTTTTTACA
AAGTTAAAAGATGACGGACCCAAAGAACGAAACCCAACATTAGACGACGG
TTTTGGTGACAGTCAAGAGGATATTATAGCCGGTTATACGACTGTCCGCC
ATCGAAAACCAAATAGAACATACGGGCGTGGTGGTAGGCGGAAGAACTAT
TTCGATCATGAGAATAGTCAAGGAGACGGTGGGACAATAAAATGCGCACG
ATGTAGTTTATCTGTTCCAGAGGAGAGATATAAAGAACATACGGACAATT
GTCTTAATGAATCCACTCTCTCATAAATGAGTATTGATATCATTACcgat
gatgatgaagatgaaaatcagCAAACAAACACCAAAAGTAAAGATGATCA
GAACAGCATTGGATCAACTTtgacagaaaaaatcaagaatgtAGTCAAGA
GACCAATACAAACCATCACTGACATATGGAATAAGAAATCAGACACTAAT
AACAATGGTCAAAGTCACAATGATGGTGAAGGAAGTCAAAATAGTATTCA
AAGCAATGACAGtccaacaaaatcaaagaaagaaacgGAAGAGAAAGTAG
AATGTCCAATGTGTGCCAAGAAGTTCCCAACGAAAGATGTCATGGACCAT
GCGTTCTATTGCGATGGAGTCAAGGAAACTCGATCAACGAGGTCGAGCTC
CAACGGGAACGCTTCAACGGGGGACTACCAAAACTGGGTGggtgcttgtc
actcgttaaaTGAAAAACCTGCTAGCAGTTCTGGAGCGTCAAATTCCAAG
ATACCAGTGGAACTACCtgaattttctggaaaaaagaagaaaaaaccatC
AGAAAATTCGTTCCGTGGACCAAAACAACAATTTGCAGAACCGGCACCTC
AACACCCTTATACTACAAACACTTCAAATGTTTTTACAAAGTTAAAAGAT
GACGGACCCAAAGAACGAAACCCAACATTAGACGACGGTTTTGGTGACAG
TCAAGAGGATATTATAGCCGGTTATACGACTGTCCGCCATCGAAAACCAA
ATAGAACATACGGGCGTGGTGGTAGGCGGAAGAACTATTTCGATCATGAG
AATAGTCAAGGAGACGGTGGGACAATAAAATGCGCACGATGTAGTTTATC
TGTTCCAGAGGAGAGATATAAAGAACATACGGACAATTGTCTTAATGAAT
CCACTCTCTCATAAATGAGTATTGATATCATTACcgatgatgatgaagat
gaaaatcagCAAACAAACACCAAAAGTAAAGATGATCAGAACAGCATTGG
ATCAACTTtgacagaaaaaatcaagaatgtAGTCAAGAGACCAATACAAA
CCATCACTGACATATGGAATAAGAAATCAGACACTAATAACAATGGTCAA
AGTCACAATGATGGTGAAGGAAGTCAAAATAGTATTCAAAGCAATGACAG
tccaacaaaatcaaagaaagaaacgGAAGAGAAAGTAGAATGTCCAATGT
GTGCCAAGAAGTTCCCAACGAAAGATGTCATGGACCATGCGTTCTATTGC
GATGGAGTCAAGGAAACTCGATCAACGAGGTCGAGCTCCAACGGGAACGC
TTCAACGGGGGACTACCAAAACTGGGTGggtgcttgtcactcgttaaaTG
AAAAACCTGCTAGCAGTTCTGGAGCGTCAAATTCCAAGATACCAGTGGAA
CTACCtgaattttctggaaaaaagaagaaaaaaccatCAGAAAATTCGTT
CCGTGGACCAAAACAACAATTTGCAGAACCGGCACCTCAACACCCTTATA
CTACAAACACTTCAAATGTTTTTACAAAGTTAAAAGATGACGGACCCAAA
GAACGAAACCCAACATTAGACGACGGTTTTGGTGACAGTCAAGAGGATAT
TATAGCCGGTTATACGACTGTCCGCCATCGAAAACCAAATAGAACATACG
GGCGTGGTGGTAGGCGGAAGAACTATTTCGATCATGAGAATAGTCAAGGA
GACGGTGGGACAATAAAATGCGCACGATGTAGTTTATCTGTTCCAGAGGA
GAGATATAAAGAACATACGGACAATTGTCTTAATGAATCCACTCTCTCAT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000091_pilon | genome | sc0000091_pilon:647178..652312 + |
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