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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:390010..393988- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12196.1.p1 ID=MSTRG.12196.1.p1|Name=MSTRG.12196.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3979bp|location=Sequence derived from alignment at sc0000091_pilon:390010..393988- (Clytia hemisphaerica_ch_hm2_pilon)
CACCACCAAAGAAAGACCTTCAGATTCGGAAGCCAGCGTTCTGTCCGTTG
AGCCATCGCCGCACAGCAAAACCACGCAATTCATAACACATTATACCGAA
CTGGCAAAAGACGGGGGTAGTGTTATTATAATATGGGTAAAAGTACCCCT
TTTTTAAACCTGACTGAAATTCGAGCCGTTACTAGCAACCCTGCGGGGCC
CAAGGCGCCGAGTATGCACCCGGCACAGTGACAAGCCGTTACTAGCAACC
CTGACCCTACCTCCCAATACCCCCTGAATCACGGAATGACGGATAGGAAA
AATTATCGGGGAAAAAAATTGCTCTGCGCGCTCTGTGCATTTAGCGAAAT
CTGTAGTGCATGCGGCCAGCTACAAGAACTAAAAGCTGGAAGTTCATTTT
GTGGATTTTGTGGGGCAGCACTTGGATTACCAGCTAGTAGTAGTAGAATA
AACCTCCAGGAATACTATGATCAACGTGAAGCGAACAGGCAACAACATTT
CAAGAAGCCAGCAGCAAAAAAGTCAACTGCTTCGACGAACACCACTGTTG
TAGTAGCATGTAAACAACCCAAACCAAAACCAACAACCTCACCAAGACTG
AGAACAGTCAATGTTGGTAGAGTGGCATACAATGAATTTGGTGATTTCAA
ACCTTTAAGAGGAAAACGCCTTCCAGTCACAGTCAAAGAAAATGCTGATT
ATTTTGAGTTAAAGCGAGAATCGATGAAAAAACACTCTGATAATTTCCAG
GACTTTTGTGGTCTGGAAGCCCACAAATTGTTGTACTCTGATTACAAGGA
AATGATCACAATCCCTGGCTCTATCGAAGACTTTCGCCTTGACAAATACA
AAGAATACTTGGGTAAATCTTATTCGCAATTATTATTCTACTTGTGCTCG
GAAATAGACTTTAACACCTTCAAAGGAATTGACAATGATAAAAACAGTGA
CATTGAAATGGAAGAGCCACTCTTTTCAGAACTTGAGTCTAACAGTGGCC
ATCACCAAATCATTACAGGGATTTCAACCACAACTACTGAAGCTAATGAT
CCAGCATTGGTCGTTTTCACCACCACCAGTTCATTGCTGCCTCTAGATCT
ATCGACCAATTCCATTAATGCTTTAACAACCAGTCCATCACATTTTGCTT
TTATGTCAACATCACTTCCTAGTTCTACCCAAAATCTATCTCCACCTGTT
ACAACCGTGAACCCACCAACACCACCACCAATAATAGCCCACCCACTATT
ATCCATTAAAGCACATGCATCGAGTGGCATTCCTACCATTCCATCTATTG
TTATTCCTGATGATGTTGATGAACTACCACTAACTGATCAGGACAATCTT
AACAATCGTTCAACCCTCAAGGAAAAACTTGACACCATTCAAAGTGCTGT
TTCCAGTAATCCTACTTTTGATTTAGAGATAAGAAGAAAGAGGGCTTGGC
TGGACACTCTCCAAAAATTGAAACGGGCTTTCTCAAAGGGGGTTCGTCCC
ATAACAGTCAAGTTTGTCGGGGAAGAAGCTGATGATTTGGGAGGTCCACT
CAGAGAATTTTACACAGTTGTTTTCGAAGATGTTAAAAAACATTTAATGT
GTTCAGGTGGTCATACTTTTACATTTTTACATGATATCGAAAAACTCAAA
GATGGGGACTTCCTCATTTTAGGAAACCTTTATTCCCTTGCTTTGATTAA
TGGATGTGCAGGGCCAAGGTCTTTAATGCCGTCTCTGGTGTCCAAGCTAT
TTTTTCAACCATGCCTTTCTACAAGTTGTCCGACTCCATCAGACATACCG
GATCTTGAAATTCAAAAAAAGGTGCTACAGATTGAAATGTGCAAATCATC
CCAAGAGTTTGATGAATGCTTGGTAAACTTTCCTGAAAGGTTTGATTGCA
TCTCAAAAGCAAATGTAAAATTTGAAGAAAAAGACAGCTTTATTCAAAAC
ATATGTGAGCATTATTGTATTTCAAAGTGTTCTGAAGAAATATTGGAAGT
TATAAGAGGTATGGATCTATTTGGCTTACACACTGCCCTGATTGAACATT
TTGATGAAATCAAATCTGAGTTTGTACTTGCCGATCAGTTGACTGCTCAA
GATGTCAAATCTTTATTTGAAAAAGTAAAACACTCAGAGAACAAGGAAAT
CCTAGAAAAGGAACAAGATGCATATTACAATTTTACCAATTTTATTGAGA
ATCTGGAAGATGCGCCATATTGTGTTAAAGGTGTTATTGATATAGATGAA
GAAGGTAATGAAGTTCCATTAGGCGACAAGGAGGTTTCGTTGGGAGACTT
GGTACAATTTTTGTCTGGTACAAGATTTGTGCTACCTTCAATGGTTGGCA
AACATGTCATCAAATTTAAAAATAAATGTGACTTTGGTGAATCTATTGAA
TCTACAACTTGTACCTTGGAAGTCAGAATACCTCTAAATGAGAGGTATTG
CACCTCAACCAAAGCATTTGACAAAAATTTTGCTGATGATGTCATCACAG
GGCCAGGATATGGTAAACCCTAGACTTTGCTGTGTTTTCTGCTTATTTCT
TGCGTTGATATTGATATGTGGTGAAATTGATTTTCTTTTGATATCCTTCT
TGGAGGGATCTTGGATCTTTTTATGAGAACTGGTATTTAACATGATTTTA
TTATGATTGAGGTTGAACTGAAAAGCCCCAAATTTATTAGATATTTTATT
TGATAACCAAAAACCTTAAAGATGTTTTGTGATTTAACCCTTTCATTTCT
TATTCATACAGGTGTGCCTTAGCATATTTGGTCACCTTTAGGCTTATTTT
ACAAAAATAAACCCACGTGGCTACTACCTAAATGAATAATGTTTAATGAG
AACTGAATGAATATGAATTTCAATAAAGCCAAAGTTGGAATTTTACAATA
ATTATCAGGGTACACAAATTTGACAACCCCATATATTTATTTCGATAGTG
TTTGTATATTGTGTATATACATCTATTCTGAGAAATGAGGGCTGGTTTAT
TTTGATATGTTGCTGGACAATAGTCAAAATATGCCAACTCCTCTCCATTT
TATTTTACTCATTGTTTCTTTATGGATCACTTTTTTCCACTTTTATTAGG
ATAGTTTTTAATATATTTTTTGATATCGTAAAAGTTGATATATTTAGTAC
ATTTAGTTTTATTTCATTGTGATGAATCATGAACTAGGGTAAAGGAGATA
ATTCCCATATTTTGCATGGATTTTAATTTTGGGCGTTTTTGGATGCTGAT
GATTCCAAAAGACATAATGAATATTCAGCCTTCTACCCCTGCACCGGGTT
TGCCAAAATGCCTGAAAATGTGTGTGTTCTCTCCTCTTGGTCGAACAGCC
TCAAAAAAGACTACCGATGTGTAGTACTACTAACGTCAGCGTCAGATTAA
ATCCCTATTCCTGGGTATTCTGACCAATATGAGTAGCAGGTTGAACAATG
GCTTTCCTTAAAAATGAATACGATTTTCGGAATCAGCACCCAAAATATCC
AATATCAATTCGTCCAGATAAAAATAGAAAATGAACTGTTATTTTTCACT
GGTTAAAGCTCAACAACCTCGAATTCTAAACCCAGCACCAGTCAATGAAT
TCGAATCTTCTGATTTCAACCTTTCTTGCTGTTTCTTTTTATGTTTTGGT
CAAACATTCAAGTGAAATAATTTTATTTTGATGATTTTCTTTTTCACGGG
AATCAACTCTGTCGACCTGCATTGCTTTATCATTGGTCTATCACACTATT
ATTTTTCCATTCATTGTATGTAAATAGAAAATTACCTTTTGTTAATTTCG
TAAAACAGTTTTCATTGTCATTGTATTGACCGATCTCTTTACATGGTTTA
TCACACCTTATCTTTATGGAATTATCCTAGTCTCAGGTACCTAATAAAGG
TACCCCCTCCCCCGCTAATTAATTTTCCGAAAATTTTCCATGCGGGTCAT
TCTTATTCTCCTCTCTTATTAATCTTTGG Coding sequence (CDS) from alignment at sc0000091_pilon:390010..393988- >MSTRG.12196.1.p1 ID=MSTRG.12196.1.p1|Name=MSTRG.12196.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000091_pilon:390010..393988- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGATAGGAAAAATTATCGGGGAAAAAAATTGCTCTGCGCGCTCTG
TGCATTTAGCGAAATCTGTAGTGCATGCGGCCAGCTACAAGAACTAAAAG
CTGGAAGTTCATTTTGTGGATTTTGTGGGGCAGCACTTGGATTACCAGCT
AGTAGTAGTAGAATAAACCTCCAGGAATACTATGATCAACGTGAAGCGAA
CAGGCAACAACATTTCAAGAAGCCAGCAGCAAAAAAGTCAACTGCTTCGA
CGAACACCACTGTTGTAGTAGCATGTAAACAACCCAAACCAAAACCAACA
ACCTCACCAAGACTGAGAACAGTCAATGTTGGTAGAGTGGCATACAATGA
ATTTGGTGATTTCAAACCTTTAAGAGGAAAACGCCTTCCAGTCACAGTCA
AAGAAAATGCTGATTATTTTGAGTTAAAGCGAGAATCGATGAAAAAACAC
TCTGATAATTTCCAGGACTTTTGTGGTCTGGAAGCCCACAAATTGTTGTA
CTCTGATTACAAGGAAATGATCACAATCCCTGGCTCTATCGAAGACTTTC
GCCTTGACAAATACAAAGAATACTTGGGTAAATCTTATTCGCAATTATTA
TTCTACTTGTGCTCGGAAATAGACTTTAACACCTTCAAAGGAATTGACAA
TGATAAAAACAGTGACATTGAAATGGAAGAGCCACTCTTTTCAGAACTTG
AGTCTAACAGTGGCCATCACCAAATCATTACAGGGATTTCAACCACAACT
ACTGAAGCTAATGATCCAGCATTGGTCGTTTTCACCACCACCAGTTCATT
GCTGCCTCTAGATCTATCGACCAATTCCATTAATGCTTTAACAACCAGTC
CATCACATTTTGCTTTTATGTCAACATCACTTCCTAGTTCTACCCAAAAT
CTATCTCCACCTGTTACAACCGTGAACCCACCAACACCACCACCAATAAT
AGCCCACCCACTATTATCCATTAAAGCACATGCATCGAGTGGCATTCCTA
CCATTCCATCTATTGTTATTCCTGATGATGTTGATGAACTACCACTAACT
GATCAGGACAATCTTAACAATCGTTCAACCCTCAAGGAAAAACTTGACAC
CATTCAAAGTGCTGTTTCCAGTAATCCTACTTTTGATTTAGAGATAAGAA
GAAAGAGGGCTTGGCTGGACACTCTCCAAAAATTGAAACGGGCTTTCTCA
AAGGGGGTTCGTCCCATAACAGTCAAGTTTGTCGGGGAAGAAGCTGATGA
TTTGGGAGGTCCACTCAGAGAATTTTACACAGTTGTTTTCGAAGATGTTA
AAAAACATTTAATGTGTTCAGGTGGTCATACTTTTACATTTTTACATGAT
ATCGAAAAACTCAAAGATGGGGACTTCCTCATTTTAGGAAACCTTTATTC
CCTTGCTTTGATTAATGGATGTGCAGGGCCAAGGTCTTTAATGCCGTCTC
TGGTGTCCAAGCTATTTTTTCAACCATGCCTTTCTACAAGTTGTCCGACT
CCATCAGACATACCGGATCTTGAAATTCAAAAAAAGGTGCTACAGATTGA
AATGTGCAAATCATCCCAAGAGTTTGATGAATGCTTGGTAAACTTTCCTG
AAAGGTTTGATTGCATCTCAAAAGCAAATGTAAAATTTGAAGAAAAAGAC
AGCTTTATTCAAAACATATGTGAGCATTATTGTATTTCAAAGTGTTCTGA
AGAAATATTGGAAGTTATAAGAGGTATGGATCTATTTGGCTTACACACTG
CCCTGATTGAACATTTTGATGAAATCAAATCTGAGTTTGTACTTGCCGAT
CAGTTGACTGCTCAAGATGTCAAATCTTTATTTGAAAAAGTAAAACACTC
AGAGAACAAGGAAATCCTAGAAAAGGAACAAGATGCATATTACAATTTTA
CCAATTTTATTGAGAATCTGGAAGATGCGCCATATTGTGTTAAAGGTGTT
ATTGATATAGATGAAGAAGGTAATGAAGTTCCATTAGGCGACAAGGAGGT
TTCGTTGGGAGACTTGGTACAATTTTTGTCTGGTACAAGATTTGTGCTAC
CTTCAATGGTTGGCAAACATGTCATCAAATTTAAAAATAAATGTGACTTT
GGTGAATCTATTGAATCTACAACTTGTACCTTGGAAGTCAGAATACCTCT
AAATGAGAGGTATTGCACCTCAACCAAAGCATTTGACAAAAATTTTGCTG
ATGATGTCATCACAGGGCCAGGATATGGTAAACCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091_pilon | genome | sc0000091_pilon:390010..393988 - |
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