MSTRG.12190.1.p2 (mRNA) -

Overview
NameMSTRG.12190.1.p2
Unique NameMSTRG.12190.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000091_pilon:232062..233690-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12190.1.p2 ID=MSTRG.12190.1.p2|Name=MSTRG.12190.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1629bp|location=Sequence derived from alignment at sc0000091_pilon:232062..233690- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGAGAGCATCCTGTCCCAAAACACTCATAGAAAGAAAATAGTAAGTTA TTATAATTAGTACTTTGCAGTCTGATAAAGTATCAATTTTTGCAAAAAAA AAATTATGTAGCAAAAATCACACAGCTCTATGCAGAACGATGGTCCTGAG AAGACGCAATTAGTCCCGAGAAGACGAAATTAATCCCGAGAAGAATAAAA ATGGGTAGCATTTATATCATAGTAGCCCTAAACATTTAAGTATATGTGAT CTAAAATATCAATTCTCAAAATTTAATCCATTTTATATGAAATAAATCCC GAAAACCCTTTCAATTTTAGTACTCATGCAAATCGAGAACTAAGTACTGA CCCTCCAATTCATTGATCAAAAGTTACTGAATGATGTGATGTTTCTTTTG TAGCTTAAAAATTTATCGAAGATTGGCGGACAGCAATTTGAAGAAAACAC AAGAAATGTGATGAGAAAGTAAGTATTTGATATCTTAGAGTACTGTGAAA GCAATGTGTTATAGTTTTCTGAAAATTGTATCATGCCCCTTCATCTTGTA GAGTAGTCTTGAAGCATCGCTTAACCTTTAATACATATTGATATCTTCTG TTAACACTACAGGTATTTTGCCATATATGACCTTATATTCGATTAAAATT CTATACATCATTCTTTCTCAGGTTGATGTCAAATGGCCTAATGTCGCAGA TGAATAAAGATGGGCAAAGAGGGAAGCGAAGATTTCTCGATTTCGAACGA GTCGTAGAACTTATCAAAGGTGCAGATGCTTTCTTATACTTTTATTTTTA GATACAATCTAAATTTCAGCTCAAACAGACTCAAACTAAACATGATATAT AATTTATCGCAACCACCAAATAATTTGATTATTTTCGCTAAATCTGTACC GTGTCCGTCGAAATTAGTTCTTACGAGGGTAATGTGCGATGTGAAATCAA AGAAACTTTTTTAGTGAGTTTTTTCTGCCTTTGTTCGATTAAAAAGACAT CTCTTTTCTAGTTGTGATTTATTTTCGTGAAATTCGCGAATTTGATCCAC GCGAAATTTTTAAATTCTTCTCTCGCGAAAATTAGACACGCGAAAATTTA TCCACTTAAGTTAAATAAACATGTTTACTATCACGTTCCCATATTTGTCA CCTTGATGAAATTACCAAAGTTCAGTCCAATAAAGAATCATTTCTCAGAG ATGTTGTAAATAATGTTATAATTATAGAATGAAGGTGATAGATAGGTCAT GGGACGTAAGATTGACAATCATCCGTTTATTTGAGTAATGTATTATTTTA TATAGACGCAGTTTTGATCAACTTTCCACCTTCGTCTGATGGTACTCCGA AGGTAACAGGGGCCCAAGTTGAAAAATACATGGGTATGGTTTTGAAGCGA GCCCCCGATCGAAAGGGAGGTGCAGGAAGACCTGAAAAAGTAGACTTCGA GAAAGAAAATGTGAGTGACCAAAATGCGGATTCGGAAGTAAAGAAAGTAG TCTTCGACGAATCCGAAGAGTAACTACAAATATAAAGTAATTTTTTGGAC AAAGATGTGTAAACAACTATAAACCCTCGAATATGACGGAGCCCGATTTT CGAAAAACAAAATTTTTGGGCAAATTTGG

Coding sequence (CDS) from alignment at sc0000091_pilon:232062..233690-

>MSTRG.12190.1.p2 ID=MSTRG.12190.1.p2|Name=MSTRG.12190.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000091_pilon:232062..233690- (Clytia hemisphaerica_ch_hm2_pilon)
ACGCAGTTTTGATCAACTTTCCACCTTCGTCTGATGGTACTCCGAAGGTA
ACAGGGGCCCAAGTTGAAAAATACATGGGTATGGTTTTGAAGCGAGCCCC
CGATCGAAAGGGAGGTGCAGGAAGACCTGAAAAAGTAGACTTCGAGAAAG
AAAATGTGAGTGACCAAAATGCGGATTCGGAAGTAAAGAAAGTAGTCTTC
GACGAATCCGAAGAGTAAGTTGATGTCAAATGGCCTAATGTCGCAGATGA
ATAAAGATGGGCAAAGAGGGAAGCGAAGATTTCTCGATTTCGAACGAGTC
GTAGAACTTATCAAAGCTTAAAAATTTATCGAAGATTGGCGGACAGCAAT
TTGAAGAAAACACAAGAAATGTGATGAGAAATTTGAGAGCATCCTGTCCC
AAAACACTCATAGAAAGAAAATAACGCAGTTTTGATCAACTTTCCACCTT
CGTCTGATGGTACTCCGAAGGTAACAGGGGCCCAAGTTGAAAAATACATG
GGTATGGTTTTGAAGCGAGCCCCCGATCGAAAGGGAGGTGCAGGAAGACC
TGAAAAAGTAGACTTCGAGAAAGAAAATGTGAGTGACCAAAATGCGGATT
CGGAAGTAAAGAAAGTAGTCTTCGACGAATCCGAAGAGTAAGTTGATGTC
AAATGGCCTAATGTCGCAGATGAATAAAGATGGGCAAAGAGGGAAGCGAA
GATTTCTCGATTTCGAACGAGTCGTAGAACTTATCAAAGCTTAAAAATTT
ATCGAAGATTGGCGGACAGCAATTTGAAGAAAACACAAGAAATGTGATGA
GAAATTTGAGAGCATCCTGTCCCAAAACACTCATAGAAAGAAAATAACGC
AGTTTTGATCAACTTTCCACCTTCGTCTGATGGTACTCCGAAGGTAACAG
GGGCCCAAGTTGAAAAATACATGGGTATGGTTTTGAAGCGAGCCCCCGAT
CGAAAGGGAGGTGCAGGAAGACCTGAAAAAGTAGACTTCGAGAAAGAAAA
TGTGAGTGACCAAAATGCGGATTCGGAAGTAAAGAAAGTAGTCTTCGACG
AATCCGAAGAGTAAGTTGATGTCAAATGGCCTAATGTCGCAGATGAATAA
AGATGGGCAAAGAGGGAAGCGAAGATTTCTCGATTTCGAACGAGTCGTAG
AACTTATCAAAGCTTAAAAATTTATCGAAGATTGGCGGACAGCAATTTGA
AGAAAACACAAGAAATGTGATGAGAAATTTGAGAGCATCCTGTCCCAAAA
CACTCATAGAAAGAAAATAACGCAGTTTTGATCAACTTTCCACCTTCGTC
TGATGGTACTCCGAAGGTAACAGGGGCCCAAGTTGAAAAATACATGGGTA
TGGTTTTGAAGCGAGCCCCCGATCGAAAGGGAGGTGCAGGAAGACCTGAA
AAAGTAGACTTCGAGAAAGAAAATGTGAGTGACCAAAATGCGGATTCGGA
AGTAAAGAAAGTAGTCTTCGACGAATCCGAAGAGTAAGTTGATGTCAAAT
GGCCTAATGTCGCAGATGAATAAAGATGGGCAAAGAGGGAAGCGAAGATT
TCTCGATTTCGAACGAGTCGTAGAACTTATCAAAGCTTAAAAATTTATCG
AAGATTGGCGGACAGCAATTTGAAGAAAACACAAGAAATGTGATGAGAAA
TTTGAGAGCATCCTGTCCCAAAACACTCATAGAAAGAAAATA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12190MSTRG.12190Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12190.1.p2MSTRG.12190.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12190.1.p2.exon4MSTRG.12190.1.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12190.1.p2.exon3MSTRG.12190.1.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12190.1.p2.exon2MSTRG.12190.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12190.1.p2.exon1MSTRG.12190.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091_pilongenomesc0000091_pilon:232062..233690 -