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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1307658..1310999+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12175.1.p1 ID=MSTRG.12175.1.p1|Name=MSTRG.12175.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3342bp|location=Sequence derived from alignment at sc0000090_pilon:1307658..1310999+ (Clytia hemisphaerica_ch_hm2_pilon)
tatatcctccaccctcccccccccatatccaaattttttctggaagaacc
caATTACAGTTCACATCAAACATCCTCCTCCTAAACTAAAATGCTTGGTG
AGTTGATTCATGTTGGCTATTTCCTTCTTTAGTATGATTTAGGGCTTGTC
TGAATCAAGGTAAAAGAGTCCAAATTTTGGATGTGAAAAATACTTCTTTC
GCTCAAATtcagaaaagtttcaaaaaaatggcgGCATCCAAAAGTCAAAT
GGAAATCAAAGatgatttagattttaaatacaaaatgaaGAGACCGTCTT
ACAATGATAATGATTTGGaattgctcaaaaaatattattacaaaGAACTC
AACAGGAATCCTGAGTGGAAAGACTACTGGGTTGAAGAAGATACAATTAT
TCGGTTTTTGAAAGCTCACGTTACGGTTCAAGAGAGTTTAGAAGCATTGA
TTGTATATTGTGATTGGAGAACCAAGTATGAGGTAGACGATATATCACCA
GATGATCCAGATATCCGCAAAGAAGGATCTGCACACAGGGAACTTATCTT
GGAGGACCAAACAGACTTTGGTGGACGACCTGTTGTTATTATGTATCCGC
ATCTGCATGATATGTATCATGGCGATTACCCAAGTTTATATAAATATATC
ACTTTTCAGATGGAACAGTTGATCTCAATATGTGACCAAGCTGAAAATGA
TGGCACTTTTTGTTTAGTAGTTGATATGAAAAATTTTGCAATGAAAAATA
TGGATTATACAGCTTTACGtaaaattttctggattttgaaaaattgttat
cCAGAACGACTAGGTGTGGCTTTGATTATTAATTACCCTTGGGTGTTTTA
TGGTTGTTGGGAAATTATCAAACTATGGTTGAATGATGTTACTAGgagta
aaattcatttttgttatcaaaaagAAATGAATGATTTTCTTGATACTAAT
GCATGTGAAAttgaagttttgaaataatATATTTCTTTGGTATATCTTAT
CTGGAATTTTATTTGTTAGGGAAAAAATAAACGTAGTCAAAGTTTGTCAT
ATCTAGCCAGGGAACTACTTACAGCTTTTTGATAGAGTGGATGACACTGg
atgctaatcaaaaatagtgtgacattgtaaaaaatgctcaaaatcaactt
tttggaataactcttcttatcggcgatccaaaaaatatctgcaatttgat
tggttaaaaagagtacaatatatcttgtattttacatgtaaaaatataaa
ttgacgaaaagatgttgttgcattgtagcggtagcagcaatctaacgtca
ctttgctacaaaagtgccctgcgcttttttccaacacaaaaagtgcattt
tttgggtcaccgataaaccagttatcagacatttgctcgtacaatatgga
aatattttactcgttccgtattttccgtatattttcctcgcctaaaggct
cggaaaatattgtacggaaaaatctcggaactcgtaaaatatttctcata
ttgtactcgcaactgtccgataactattacatatttttTGAGTCAGCCAT
TGAGATTTCACAGGGTAATAGACCTCAACGTGGagatatgattaaaaaaa
aaaagtttgttatttGAGTCAAAATTGTGACTGCAGATCAAAAattatag
ttttttttaaagtgtaaGCCACACACGATATTGAAAAGTGATCTCTGAAT
GGGACCTTCTAGACTTGAAAAAGAAAggctgaattttccaaaaagtgtta
aatgtacatacttttGCGTTGTTAAATGTACTTTTTTGTGGCTTTTTTGT
CGGCCACATATTTTACTCACACTTCATGCTTTAATATATTTAAGTTGagt
aagccacaaaatttcgttctttttgcaaCAGGTAGATAAATTATTCAGCT
TAACCATGTATTTTGACATGTAAGCCACATGATGGCCTCATTCTATGAGC
AAAATAGTGGACGAcataaaaaatgtcacaaaacaggggttaatttttga
ttagcatcACTGGATAGACTGGATGACACTGATAAGTGACCAAGTGTAAT
GCTGGCAGACTCCAGTTTTTGGCTTTCCTTGAATACGTAGAAAATCCATG
CTACTAGATATAGTCAGTCTCTTTTTGGAggaaaacaaacagaaaaccat
gACCAATGGACAATGCTTTCCAAAGTTTGGgagtattttcatgtttttag
tatagtttataaactttgattgggttttagaatatattttattgttttgt
tgtttttgtttttgttttttttcttaaaatggcgatatcctctagtctac
tcCACTGGACTCTGggtagtttaggtataaacttatttcgccaacaaaaa
tcataaaaaagaaataagtttatacctgaATTAGACTCTGGGTGCCTTCA
AATAGCAAAATTATTAGAAAGCAAACTATTCATTTTTAtgtaaactttta
aatataaCTCGAGCTTAAAATATGCCAGGAGAATAGTATCTCTGAAAAGT
TGCTTTGTTTACTAAAGAGAGAATACAGTAAAGAAAGATATTCATCTATT
TTTTGATGAAGAAGCTCTGAGGTCTAAAAGAAATACTAAAAAGGTTGAGC
TAAGTtggtttaatattttttcaagtatcttttttctgtttgactAGCAT
TTCAATTTTGGTTTACAGtaaagaattattttcttttcactctacCAAGG
AAATTAACTACAAttacaaagattttttcaagtttgtttttctaaattga
aatttatttattgttcACTCAGGTTCACTACAATATATCTATATATTTTA
GTAGCATTTAAACATGAATGTTCATTATCACTACATataaaagcatttga
aaataaaaataaaggttaaaaaatagtgaaaatgcaaacatgataaaagt
attaaacttttttaaatttctatgattatatttttggtggtaattttatg
tatcaactttatagtattttatcttgatttttcacatttttgtaaATATC
ACTTTGTAATTATTTAAATGAAATTGCGGTGTacaaaagtctttttgatt
tttaggtgTTGTAAGATTCTGTGTAATTAAGTCAATTCAACTAAAGGATA
GAAAAGTATAAATTTTGCTGTTCctcctttttcttttattaataaGCACT
ATCACTTCTTCACGACATGTCTTCCTTTGTTTACAGGACAGACACCTTAT
atttgtgttttattttcattcaaaagtttGTCAGTGTTATGATATAGCAT
TGCCTTCTCTATGTGATTGTGATCCATGGGAAAAGTATTTTCTGTCTGGA
AGTACAGTTTTTAACTCTTGCCAGctcttgctaattcgaact Coding sequence (CDS) from alignment at sc0000090_pilon:1307658..1310999+ >MSTRG.12175.1.p1 ID=MSTRG.12175.1.p1|Name=MSTRG.12175.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=750bp|location=Sequence derived from alignment at sc0000090_pilon:1307658..1310999+ (Clytia hemisphaerica_ch_hm2_pilon)
atggcgGCATCCAAAAGTCAAATGGAAATCAAAGatgatttagattttaa
atacaaaatgaaGAGACCGTCTTACAATGATAATGATTTGGaattgctca
aaaaatattattacaaaGAACTCAACAGGAATCCTGAGTGGAAAGACTAC
TGGGTTGAAGAAGATACAATTATTCGGTTTTTGAAAGCTCACGTTACGGT
TCAAGAGAGTTTAGAAGCATTGATTGTATATTGTGATTGGAGAACCAAGT
ATGAGGTAGACGATATATCACCAGATGATCCAGATATCCGCAAAGAAGGA
TCTGCACACAGGGAACTTATCTTGGAGGACCAAACAGACTTTGGTGGACG
ACCTGTTGTTATTATGTATCCGCATCTGCATGATATGTATCATGGCGATT
ACCCAAGTTTATATAAATATATCACTTTTCAGATGGAACAGTTGATCTCA
ATATGTGACCAAGCTGAAAATGATGGCACTTTTTGTTTAGTAGTTGATAT
GAAAAATTTTGCAATGAAAAATATGGATTATACAGCTTTACGtaaaattt
tctggattttgaaaaattgttatcCAGAACGACTAGGTGTGGCTTTGATT
ATTAATTACCCTTGGGTGTTTTATGGTTGTTGGGAAATTATCAAACTATG
GTTGAATGATGTTACTAGgagtaaaattcatttttgttatcaaaaagAAA
TGAATGATTTTCTTGATACTAATGCATGTGAAAttgaagttttgaaataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1307658..1310999 + |
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