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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1290649..1294410+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12174.1.p1 ID=MSTRG.12174.1.p1|Name=MSTRG.12174.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3762bp|location=Sequence derived from alignment at sc0000090_pilon:1290649..1294410+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGAGCAGTCAAACCATCCTTCATCACCATGAGATTGTCATCGATTCTTT
TGATCGTTTTGTTTGCAATCAATTTCTATGATATTCATGCTGCCTCTGGA
AATGTCATCAAAAGTAAGAACGAAACCATAACCCTGTATAACTGAGTAAG
GGAataaaaacacccctgtttcactaGCCTGACGAGaaaaaaaCAGTCTT
GTCTCATTGACTTGGTGATCGCCAAAAGAACACCCCTATCTTGCTGACTT
GATGAAAGACAAAAAATAGCCCCGTCTTATTGACTTGATGATAGACTAAA
AAACACCTCTGTCTCATAAACTTGATGAGAGAAAAGAACAGAGCTGTCTA
ATTGACGGGGATATAGAAtttaatttaagatttttttgtaTCGCTAATAT
AAGCCAAGCAAAAGTGCTACTTGTATTGTGACCAAAGAAGTATACGCCCG
AAgagctagaatcgaatctttaacctttctcaagcaagaaaaagtgaagc
cttaaatatgcgccgtatttttgatgacggattgaaccTAGCAAtgcctt
tgttttcgagtgatatatttttcgaaatttagctgtaaattttagtttca
atctgttatttgtgtaaaaaccataTGAACCGTGCTAGGCCGCGcaattt
tggtaggatttggtaggcttcaaatcctaccaaggagattcgattctagt
ccttcgggcttatacttcattgatttTGACGCACCGGAACAAGGACCTCG
GGAATTCAATTAATTTAATGtagaaatacacctttcccgtaattcaaact
tctcagaaatttGCCGGGAAAATATGCACTCCGCCGTtctgtataaaatt
gtttgggaggtaaacgaacGGGTTTTTGCTtgtgaggggttagggaaagt
agGTATTTAGCTTCTAGCTTTTGATTGCGATCTCtgtttggcaaaatatt
ttcagggtggtataataaatagaaagaatacacgtttttttttaggaAAC
TAGTtctaccaagcagcctcaatgtttcttaagaaattggacTTTTGAGC
CTTacatgtttcttacatgtttctaaactttttgacataatcagcctcat
ggaaggctggattggaaggttcttaaaaaaaacgaattaaaaaatgttat
attctcattctcagcctcagcatgtttcttagtttttaggcattctgagc
ctcatgtttcttaaaaatgtgtttcttaaaaaaacaaacgttaTACCAAG
ATCTGAGAGGGTTCTGTTCAACagaacttaagggctctgaccatagtgaa
tttttaacatttgccatatacaaaatatgaatttctgcctgatgtagcgg
acaaaactttgacatgttatacattttccgtgagtctgaaaattaaaaat
tgcaatgaaataatttgatgaagaagaagatgaagacttttgcgaagaag
agcatttcaactttgaagagcttagtttcggcgaagaaaaaacattttga
aaatatttttgcggtAGATAGTGTATCCTTTGTCgaactaaaaatttttt
tcctgaaaatagtgctttttgaccaattttccatcccaatttttcataga
aaaacaaccataacttttgatgcattaatttagaaaatttttccaaaaaa
ttaaaacagtttaattctttgtggacagtttgaaaaaactttgaaacaaa
aaggttaattacccattaaaacttagcactttttataaaagaaggtgatg
caacatattattaatgtcttttttaaagttcctaacgtcatttttgcaat
taagttcttaaatactcttaagggatttgatcaaaaagcaatttataaag
gcaattctttgttaaaagtgttaaagaatctaaaacataacttttatatt
cagatactaaaatcaattttccgactatgatggtcagagcccttaagaaa
agctcaaaaaactaACTTTCCCCAAGGAAACGCAGGCAATAAAAGTGTTG
TTTACCTCAACCAAaaaccaaacggtggagagcaacAAAACAACGCGCGC
GCATCTGTTTTGCAAATAACGAGAAAGATGTATACAGATAAATCACTTAT
GAACGTTATGAACCAATGAACCTAGACGTTCCCCGCGTATTTTTCTACGC
AATCAAACAGCATAACATTCCCTGTTATTTGGTTGTTAGTGAGGTACTGG
CTATTACCCAATAAGAGTTTATTAAAAATATTCCATTTCATCCtatctta
aatttttttcaaatctgcTATTcatacaatcaaggtcataatatttgagg
aaaaagggaaattcaccgtgaagttttgaaaccacaatcggtTTGCGaat
gctctaaagtaggttggaagggtagatttttatttctgagttttaacgct
agacttaagacttctaaagtccaaaaatagtccaataaggatcagaatat
agcctggaagtctgccaacgcctcccaaattgaaatattcgattaaatta
aagagataacccaaaatcgactttctctccggaactttaaatcttgaaaa
acgttaaaataaccgaaattttcaatatatttcaaccatgattgtagaat
gCCGTGATGTGATGGGCGCAGGGTATTGTGGGATACCAGGGATGTGTGGC
GTTTACAAGGGCGCTTGTGCAAAGACTTGTGGCGGATGTGGTGGGCGGAA
GAGGATTGTTGGTGAAAATGAAGAGGGGGATATGAACGACCAAAATTACA
ATAGTAAGTGAAATTATCAAGCAAATGAAAGCATACCCCGCTggaacaca
acgttgttttaacgtttgtctaacgttcacagcgtccatataaccttaga
tgaacgttgaaacaacgttgtcgTGTGCCAGTTGGGTATCTTGCATGTTC
ACACCCCTGTGTCGCAGACCAGCTGGaacccagccccactggaaaattta
gcgaAAATTTAATCCCCAGTGGGAAAATTTTGCTGGTCCCCGGTGGGGAA
ATActcttgaatttcagccccactggaaattcaatatttaaaaattgtac
tccaaaaccaaccccactggatttttaaaccttgaaacaatagaattgaT
ATCCCCactgggatttcaataggaatttttatccccactgaggaaaagaG
TTCGGCCTGGGCTTTGAGACAAAGGTTTGTATATCCTGGAGAGTCTTCAT
AGCGCGAAAACGCACGAGGAACTAGGATTTGTTCGACTAATGGGAAATTC
AAATCAAACATAGAGATTTCTTTCTATATGGGTTTCTTCTTCCAGACAAC
AAGATTTTCATGTTGTAaagattcgagttatggagattttATATGGCTAA
ATGGTAAAATTTTGATAagggaaattgtacttctgaaaacccaaagaTAA
GGTAAATATTGGCTAAAATCAGgatttttggagcaaaataaggccACTTC
CTCTTTGCTaactgaaaattttcgaaaaattaacatgAAATTAACaagcg
tttatttggcacctaagagaaGTTAGCCATGCAGCACTACTTACCAAGAC
TCatgccaaaatttttttttcatttttcagtgtTGAACTATTGGCGAAGA
CGTGATTTACTTCGACAAAAAGATTTCTTACAACAATTGCGTGAAAATGA
CGAAAAAACTTTATACAAAATGTAAAAGTTTATTATTAGAAATATATCGT
CTTTTGAATTCTGTAGTAATGATTGATCAAGAGAGAATCGTTTGAAGATA
TTATTGAGTGTC Coding sequence (CDS) from alignment at sc0000090_pilon:1290649..1294410+ >MSTRG.12174.1.p1 ID=MSTRG.12174.1.p1|Name=MSTRG.12174.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1089bp|location=Sequence derived from alignment at sc0000090_pilon:1290649..1294410+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAGCAGTCAAACCATCCTTCATCACCATGAGATTGTCATCGATTCTTTT
GATCGTTTTGTTTGCAATCAATTTCTATGATATTCATGCTGCCTCTGGAA
ATGTCATCAAAAaatgCCGTGATGTGATGGGCGCAGGGTATTGTGGGATA
CCAGGGATGTGTGGCGTTTACAAGGGCGCTTGTGCAAAGACTTGTGGCGG
ATGTGGTGGGCGGAAGAGGATTGTTGGTGAAAATGAAGAGGGGGATATGA
ACGACCAAAATTACAATAtgtTGAACTATTGGCGAAGACGTGATTTACTT
CGACAAAAAGATTTCTTACAACAATTGCGTGAAAATGACGAAAAAACTTT
ATACAAAATGTAAGGAGCAGTCAAACCATCCTTCATCACCATGAGATTGT
CATCGATTCTTTTGATCGTTTTGTTTGCAATCAATTTCTATGATATTCAT
GCTGCCTCTGGAAATGTCATCAAAAaatgCCGTGATGTGATGGGCGCAGG
GTATTGTGGGATACCAGGGATGTGTGGCGTTTACAAGGGCGCTTGTGCAA
AGACTTGTGGCGGATGTGGTGGGCGGAAGAGGATTGTTGGTGAAAATGAA
GAGGGGGATATGAACGACCAAAATTACAATAtgtTGAACTATTGGCGAAG
ACGTGATTTACTTCGACAAAAAGATTTCTTACAACAATTGCGTGAAAATG
ACGAAAAAACTTTATACAAAATGTAAGGAGCAGTCAAACCATCCTTCATC
ACCATGAGATTGTCATCGATTCTTTTGATCGTTTTGTTTGCAATCAATTT
CTATGATATTCATGCTGCCTCTGGAAATGTCATCAAAAaatgCCGTGATG
TGATGGGCGCAGGGTATTGTGGGATACCAGGGATGTGTGGCGTTTACAAG
GGCGCTTGTGCAAAGACTTGTGGCGGATGTGGTGGGCGGAAGAGGATTGT
TGGTGAAAATGAAGAGGGGGATATGAACGACCAAAATTACAATAtgtTGA
ACTATTGGCGAAGACGTGATTTACTTCGACAAAAAGATTTCTTACAACAA
TTGCGTGAAAATGACGAAAAAACTTTATACAAAATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1290649..1294410 + |
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