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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1282417..1285878- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12171.1.p1 ID=MSTRG.12171.1.p1|Name=MSTRG.12171.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3462bp|location=Sequence derived from alignment at sc0000090_pilon:1282417..1285878- (Clytia hemisphaerica_ch_hm2_pilon)
CTTACTCCATAACTCGAAATTTCCTTAACTCGAACAAATTTGTGTTAGAT
GCATGTTCACGGAGACTCGATTGTATTTTCATCACCATTAACATTATCCA
ATCAAATGCTTCATTTTCAGATCTCAAATCACTTTCAATATGAAAACATT
AGCCGCCATTTTAGCATTTGCTTCCATAGCAACAGGGTATACTTTACAGA
ACTACCAAAAATACAACGATCATTGTCACAGTCTAGAATGTCCACGTTAC
ACGCTCCTTAATAAAACAGAAAACTATGAAGTCAGGAAATATGAGAGTTT
TAAATGGGCCACCGCTTCAAGTCACTCACAAAGTAAGTAAACTTTTTTAA
AGATTTTATTCTTGATATGCGTGAGTCATTTTTCTAGCGGAAATACCCTA
AAAAAGCCGGGATTTTACCTCTCTCTGTTACTAAAAATAGAAATACAGAG
GTCAAAAACCGGTGCTTCCGTTAAAAAATATGAGGTCATCTTGACTTACG
CATATCAAGAATTAGCACAAATGCGTGTTAACACACCCCTGTCTTATAGC
CCTAATGGATTTTTTTCCTTATTGGGGATAAAAATTCCTATTGAAATCCC
AATGGGGATAGAAATGGAGTGCAATTTTTAAATATAAAATTTCGGATGGG
GATGAAATCAAAGTCATTTCTCATTGGGGCTGAAATTCTGGGGACGGAAT
TTTTGCAAAATTTTCCAGTGGACACAGGGGTATGTGTACCTTATTAAAAT
CTACTTTTTCTGAAAATTTTCAGTAGAGTATTATGGAGTACCCAGAAATG
TGTGCCAGGCTTTACTTACGGCTTCTTCCCTTCCTGGTGACTGCTGTTAT
ATTTAATTTGGAAAAGAAAAAAATCAAAAGTCCTCTTGGTTTCTGGCAAC
CTCGTCCCCGTGAACATTATCAGTAAGCATCAAAAACGCTGATAATAAGC
TGGGAAGGAGGTTGGGTTTCCGTACTTATCGGCGATCCAAAAAATATCTG
TAATCTGCTTGGTTAAAAGAATACAATATATCTTGTATTTTACATGTACG
AAAAGATGTTATTGCATTGTAGCGCTCTCAGGCAAATTAAGGCACATCCA
AATTTACCATAATTTTTTATCACCGTTTCCACTTGTCATAGCATATCACT
TCATACATTCGAAAGAAGCCTATTGGAGTGTAGAACACTGGAATAACTGT
GCCATAATTAATCTTTTCGCCCAAAAAAAGATATTAGACAAAAACCAAAA
AATGCTGACGTCAGCAAAACTTGTTTTTTGAATAACTCCAGTTTGGCTTA
TGGTATATTCATGAAATTTTAACAAAAGTTGTATATTAATAATAGGAACA
TTTTTGCATAATTTTTTCTTGCAAATTTTGCTGACGTCAGCAGAAATCAG
CAAAATACGAAATTTTGCAATTAAGTGCTGACGTCAGCAAAATTTCAAAA
ATTTTCTTTTTCAAAATGATCCTTTTAATGGTGTGCAACTTTGGTCTAAA
TTTCATGTTTTTACCATAAGCCAAACTGGAGTTATTCAAAAAACAAGTTT
TGCTGACGTCAGCATTTTTTGGTTTTTGCCTAATATCTTTTTTTGGGTGA
AAAAATTAATTATGGCACAGCAATTCCAGTGATCTACACTCCAATACGCT
TCTTTCGATATATGAAGTGATATGCTATGATAAGTGGAAACGGTGATAAA
AAATTGAGGTAGGTTTGAAAAATCTGGACAGGCCTTAATTTGCCTGAGCT
AGCAGCAATCTAACGTCACTTTGCTACAAAAGTGCCCAACAAAAAGTACA
TTTTTTCGATCACCGATGAACCAGTTAAGGCGGTCCGATAACTGTGGGGG
GCGTACGGTTTTACGGAAATCAGGCAAAATTCTTACGGTATTTCGGAATT
CTGAAATTGTTTCGGTATCGGAAACCCGTGAATTTTTGCTTCGAAATTTC
GGTATTATAAAGTTTTTATCCCCTTTTTTCGGAATTCATACATGAAAAAT
CAAAAATTAGTCAAAACGGGGGAAAAAACCCCAAAAATCGGTATCGGAAT
TGCAAGTATTTTTTTACGGAATTTTGGAAAAATTCTCCGGTATTTCGGAA
ATCGCAAACCCCGTACGCCCCCCCCATAACTATAACATATTCTCCATTAT
TTCCCTTCTAGCATTGGACTACAAGCAGGCAAGCAAGGACAACTTCATGA
AACTCTTCCGATATATTTCTGGAGCCAACGAACAGAAACAGAAAGTGGAG
ATGACAGCTCCAGTTCTCGTTCACATCCCAGTAACTCAAGGACCTTTCTG
TGCTCCTGATTTCACCATGCACTTCTTCGTACCATACAAATTTCAATCTA
ATCCACCAAAACCATTAAATAACTCTGATAAGGTAACTTTAAGTGGGTAG
TACACCTTTTTTTATAAGAACATTCAAATTTTCGAAGCCTTCGGGGTTTA
CAGCATTTCCAGGCACAGGGGAATGAGCCTCCTGAAAAGGGGGTATACGG
CCTTTTTTCTGGAAAAGCCCAATGTTCTTAAAATGTTCTTATTTTTACCA
ATTTCTCTGAGTATTTGTGTCCATTTTCCAAAGAAATCATAGGTGTTTTA
AAGTTTTCAAGCCTTAACTTGTTCTTAACTTGTTCTTAATATTTTAGCCT
TCGAAGCCTCAATGTTACCCCTGAAAATAAGAATATGATGAGAACAACTC
TTCCCTCAAAGTGCTAATAAAAAATAAGAACAAATATTTTCGACTATTTT
AAAAAGAAGAGTTGTGGAGATAGCCCTGTCTCACAGCCCCGGTGTAACTT
TTTTCGTCAGTGGGATAAAAACTCTTTCTGAAATCCCAATGGGAATAGAA
ATTCTATCGTTTAAATGTTTTAAAGGTTAAGAAATCCAGTGGTGATGGTT
TTGGTATGTAGCTTTGAAACATTGAATTTCGATAGGGACCAGGGGATGAA
ATCAAAGTCATTTTCCCAGTAGGGCTGAAAATCCAGGGTATTTCTCCACC
GGGGACGAAATTTTTGCCTAATTTTCCAGTGGGGCTGGGGCCCGAGTGGG
TCCGTGACACAGGGATGTGTTTATCCTATTGAAATCTACTTTCTCTAAAA
TTTCCAGGTCAGTATTATGGAGCTTCCAGAAATGACTGTTTTCGTTGCCT
CATTCGGAGGTTGGATGGATCAAGAAAAAATCCAACAAAATGGACTCTTA
CTTGGGAAAGCCCTTCAAGAAGATGGTATCGCGTTTGATGATTCCCAGAT
GTTCACAGCTGGTTATGATTCACCTTTTAGATTGATTGGTAGACATAATG
AAATCATGTTTCTACCTAAAGAAAATCAATTCAGAGTTTAGAATTATTTA
TTTTTTGAGCAAATTTTTTATATTGTAGATCTAATTTTTAATATATACAG
TGGCGGCCTGGCAGGGGGTGCAGGGTGTGCAGTGCACCACCCAGAAAGAT
CTGAGAGGGGCG Coding sequence (CDS) from alignment at sc0000090_pilon:1282417..1285878- >MSTRG.12171.1.p1 ID=MSTRG.12171.1.p1|Name=MSTRG.12171.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000090_pilon:1282417..1285878- (Clytia hemisphaerica_ch_hm2_pilon)
GTCAGTATTATGGAGCTTCCAGAAATGACTGTTTTCGTTGCCTCATTCGG
AGGTTGGATGGATCAAGAAAAAATCCAACAAAATGGACTCTTACTTGGGA
AAGCCCTTCAAGAAGATGGTATCGCGTTTGATGATTCCCAGATGTTCACA
GCTGGTTATGATTCACCTTTTAGATTGATTGGTAGACATAATGAAATCAT
GTTTCTACCTAAAGAAAATCAATTCAGAGTTTAGCATTGGACTACAAGCA
GGCAAGCAAGGACAACTTCATGAAACTCTTCCGATATATTTCTGGAGCCA
ACGAACAGAAACAGAAAGTGGAGATGACAGCTCCAGTTCTCGTTCACATC
CCAGTAACTCAAGGACCTTTCTGTGCTCCTGATTTCACCATGCACTTCTT
CGTACCATACAAATTTCAATCTAATCCACCAAAACCATTAAATAACTCTG
ATAAGATGAAAACATTAGCCGCCATTTTAGCATTTGCTTCCATAGCAACA
GGGTATACTTTACAGAACTACCAAAAATACAACGATCATTGTCACAGTCT
AGAATGTCCACGTTACACGCTCCTTAATAAAACAGAAAACTATGAAGTCA
GGAAATATGAGAGTTTTAAATGGGCCACCGCTTCAAGTCACTCACAAAGT
CAGTATTATGGAGCTTCCAGAAATGACTGTTTTCGTTGCCTCATTCGGAG
GTTGGATGGATCAAGAAAAAATCCAACAAAATGGACTCTTACTTGGGAAA
GCCCTTCAAGAAGATGGTATCGCGTTTGATGATTCCCAGATGTTCACAGC
TGGTTATGATTCACCTTTTAGATTGATTGGTAGACATAATGAAATCATGT
TTCTACCTAAAGAAAATCAATTCAGAGTTTAGCATTGGACTACAAGCAGG
CAAGCAAGGACAACTTCATGAAACTCTTCCGATATATTTCTGGAGCCAAC
GAACAGAAACAGAAAGTGGAGATGACAGCTCCAGTTCTCGTTCACATCCC
AGTAACTCAAGGACCTTTCTGTGCTCCTGATTTCACCATGCACTTCTTCG
TACCATACAAATTTCAATCTAATCCACCAAAACCATTAAATAACTCTGAT
AAGATGAAAACATTAGCCGCCATTTTAGCATTTGCTTCCATAGCAACAGG
GTATACTTTACAGAACTACCAAAAATACAACGATCATTGTCACAGTCTAG
AATGTCCACGTTACACGCTCCTTAATAAAACAGAAAACTATGAAGTCAGG
AAATATGAGAGTTTTAAATGGGCCACCGCTTCAAGTCACTCACAAAGTCA
GTATTATGGAGCTTCCAGAAATGACTGTTTTCGTTGCCTCATTCGGAGGT
TGGATGGATCAAGAAAAAATCCAACAAAATGGACTCTTACTTGGGAAAGC
CCTTCAAGAAGATGGTATCGCGTTTGATGATTCCCAGATGTTCACAGCTG
GTTATGATTCACCTTTTAGATTGATTGGTAGACATAATGAAATCATGTTT
CTACCTAAAGAAAATCAATTCAGAGTTTAGCATTGGACTACAAGCAGGCA
AGCAAGGACAACTTCATGAAACTCTTCCGATATATTTCTGGAGCCAACGA
ACAGAAACAGAAAGTGGAGATGACAGCTCCAGTTCTCGTTCACATCCCAG
TAACTCAAGGACCTTTCTGTGCTCCTGATTTCACCATGCACTTCTTCGTA
CCATACAAATTTCAATCTAATCCACCAAAACCATTAAATAACTCTGATAA
GATGAAAACATTAGCCGCCATTTTAGCATTTGCTTCCATAGCAACAGGGT
ATACTTTACAGAACTACCAAAAATACAACGATCATTGTCACAGTCTAGAA
TGTCCACGTTACACGCTCCTTAATAAAACAGAAAACTATGAAGTCAGGAA
ATATGAGAGTTTTAAATGGGCCACCGCTTCAAGTCACTCACAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1282417..1285878 - |
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