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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1183664..1186847- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12164.1.p2 ID=MSTRG.12164.1.p2|Name=MSTRG.12164.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3184bp|location=Sequence derived from alignment at sc0000090_pilon:1183664..1186847- (Clytia hemisphaerica_ch_hm2_pilon)
GATATATGAAAAACTGGACGAACAAAAATTGTTGTTTTATCACTTTGATG
CATAAGTACAGCTATAATATTTTTGTTGATTTATTTTTGAAAGTAAAATG
GCTAATCAAGTGAATATTGCAGGTATCGCTAATCAAACGAATATGGCAGG
TATCATGCAGAAGGTTTTGTCTTTGAAACCATTACCAATCGATCCAACCA
GATGTACTCCCAACAAATCGTTGTATCAGCAGATTCTCAATAACAGTCAA
GCCACGTCAGAAAGACAAGCAAAACAGTTCAACTTGGGGAATTCGCACTG
TACAGCAAACCCTATGCATGCAGCCGACTTCGTTCTTGAAAGGGAGTATG
GAGACAGTTCTCTCTTTGTTCAAGGTGAACGCACCAGTGTTTTCATACCA
CCCACGTTTGTTTCGAATCAATACAAAAAGTCTTCTTTTGCTATCCTTAA
TTATGACGTCAAAAAAGACATTGACAGACTTTTGGTTAATTTGAAACAAC
ATTCACCAACGTATTGGCTGACCAAAGAATTGGAAACTTTTATGCAAACA
CAAAACAATGCTGATTCTATCGACAAGAAGGCGTTTGGGAAATGGATTCT
TAACCTTCAAATCATGTATCTGGCAATTAGTGAACTGAAAACTGACCAAG
TGACCCTACCACAAACCACTTTGGATATAGGAGTTTTCGTTCAAGGATGT
CTTGCCGTGCTCTTTCCTACATCACCTCTGGGAACACTTCTTCAACAAAA
TCTCTTCACCAAAAACCTCAAAAAACTGATCAAGCAAATGATTGAAGAAA
CACCAAGCAAAGATTCAAACCTTGGATGGCTATTCACTTTGGAACTGTCA
GAAGTTGGTGAAAAGCTGGAACACTGGTTATATGACCAGCTTCTACCATT
GAAAGATGACAATCTCCAAAACACAGTCGTTCTTTCTTCACTCATTTTTC
TGACAAATGTGCAAAAAAAAATGCATAAAGAGACAGATTTTCTAATCATA
TCTTGGGAACGGAAGCTTATCATTTCAATCGAGCTGAAAAGAACAATCGC
AGATGATAAAGTCTTCAAGCAGTTGGAATCAAACCATCGGGTTTTCGAGG
AAAGATTAGGGGACCAATTGATTTCAGGTTGGACGTATTTTCCGGTGGTC
GGCGTGGAGAACGACAACCTTTCAGTAAAAAGTCAGCATTATATCACAAT
CCAAACTGAAATAAAACAATGGCTGACCAGTGTCTTCAAAAGGTTCCCGA
CAATTCCAGCAGTGTCCATACCGAATCCATTGGACGAAGCTAAGAAGCTA
CTCAAAATCCTGGTCTTTGCCATTCACGTTTCGAAAAAAGATCAAATTGC
ACATATTACTAGCTCAACATGGGTCGAATACACCAGCAACGCTATCGAAA
ATGTTTCAACTAGCCACAACATTTTATTCTACTCCAACCAACAGATGGCA
ATCATGAACAACGATGAACCAAGCTACAGGAGAGTGGTCATTAGTGGGCC
TTTTGGTGTTGGAAAATCAATCTTACTTACACAGAAGGCCATACAATTAA
ACAAACGACCTGAATACAATGGAAAAGTTATGATTGTTGTTGATTCGCAT
TCTTACAAAACTAAACCCATGCAATTTCATCGTCTGAAGGTTGACTTGGA
GAATCAACATGGAATATTTGTTGAAGATTTGAGTTCGGTAGGTAATCAAT
TTTCTTATAATTGTGAGTATGACAGTCATTATAAAAATGATCTTCCTTCT
TCAACTGCGATGTAAAATCTAAATTCTTGAGGATGGTTCCTTCTTTCAAG
TTTTCAAATCCTTTGTGTTTTTTCAAATTGAGTAAGAGAATTATTTTCCG
TTTTTTCATTTTATAGTCATCTCAAAAAGGTCATCATCTTGAAACAATCA
AAGCACGGAAAATCAAAGCATTGTTCATCGATTAATTTGAAATTTCAAAA
AAATAAATAAAGGATGCTCGAAAATCGATTGGATATTTTTAAGTCTTATA
TAATCGGTGTTTATCATTCATTTCACAGGATCAGAACGTTCGCATTCGTT
TTGTTGAGATGATTAAAACACGGAAAATCAAAGCATTGTTCATCGATTAA
TTTGAAATTTCAAAAAAATAAATAAAGGATGCTCGAAAATCGATTGGATA
TTTTTAAGTCTTATATAATCGGTTTTTATCATTCATTTCACAGGATAAGA
ACCATTACATTCGCATTGTTGAGATGATAAAAAGACGGAAAATCAAAGCA
TTGTTCATCGATGAATTTAAAGTGTGGTCAGAAACCATGAAATCACAAAA
CAAAAAATGGATAAAGGAGGAGGTGATGCCACTCGTTGACTACTTATGGA
TCGTCCCATCGACAGAAAGTTTGAGTAAAGGAAATTACCAAGAATTTTCG
ACTGACTTTTTGTTCGTCAATCTTGAACAGAATTTTAGGAATTCTCAACA
GATTGTTAAAGCAACCAAATCTGTAGCCGAGGAGAAATATTATGACTACA
AACAAGGGATCGTCATGCCACTTGGTAATTTTCCGGATGGTTGCGAGCCA
ATATTTGTTGACACGTTCGAAGAAGCAGTGATAGAAGCGAGAAAACGAAC
AAATGAAGGAATCCTTCTGATAAATAGTTACAGAATCGATGCAAATTCTT
ATTCTGAGGTTCTAGATCGGTTGAACGAGAATTATAAAGTATATCACGGT
ACAAAAAATGATTTTAAAGAGGGAGAAAGTCCGTATAAGTTTCTTCAGGA
AGGAAACATTTTGATCATTGAGGAATTTACATCTTTTGGATTTGACTGGC
CGACAGTTATTGTATTAGAACAAATCGGTGACGCCACAACTTACCACGAT
TGTAATTTCATGTTACGATGTACCACAAACCTCATTGTGGTAAATGCATG
AGAATCATGAGATAATGAAAGTGATTCGGAGAAAACCAATCTTCTGAGGT
AACAAAAAACAAAGAGATCATTTAAAGGAGAATAAATATAATTGATCTGT
CTTTACATTTTACAAAACTATACGAAATTTAAGTCAAATATCATAACCAT
CAGAATTTATTATGTAAAAATAAAAGTCAAATTTGTATGTTATTACTCAT
TATTCAAAAAATCGCATCATATCCTTATTCACTTATATCCTTATGTCGAC
TTGCTGCCAGCATTTACCCTTGAAATTATCTGGG Coding sequence (CDS) from alignment at sc0000090_pilon:1183664..1186847- >MSTRG.12164.1.p2 ID=MSTRG.12164.1.p2|Name=MSTRG.12164.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000090_pilon:1183664..1186847- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAAAAAGACGGAAAATCAAAGCATTGTTCATCGATGAATTTAAAGT
GTGGTCAGAAACCATGAAATCACAAAACAAAAAATGGATAAAGGAGGAGG
TGATGCCACTCGTTGACTACTTATGGATCGTCCCATCGACAGAAAGTTTG
AGTAAAGGAAATTACCAAGAATTTTCGACTGACTTTTTGTTCGTCAATCT
TGAACAGAATTTTAGGAATTCTCAACAGATTGTTAAAGCAACCAAATCTG
TAGCCGAGGAGAAATATTATGACTACAAACAAGGGATCGTCATGCCACTT
GGTAATTTTCCGGATGGTTGCGAGCCAATATTTGTTGACACGTTCGAAGA
AGCAGTGATAGAAGCGAGAAAACGAACAAATGAAGGAATCCTTCTGATAA
ATAGTTACAGAATCGATGCAAATTCTTATTCTGAGGTTCTAGATCGGTTG
AACGAGAATTATAAAGTATATCACGGTACAAAAAATGATTTTAAAGAGGG
AGAAAGTCCGTATAAGTTTCTTCAGGAAGGAAACATTTTGATCATTGAGG
AATTTACATCTTTTGGATTTGACTGGCCGACAGTTATTGTATTAGAACAA
ATCGGTGACGCCACAACTTACCACGATTGTAATTTCATGTTACGATGTAC
CACAAACCTCATTGTGGTAAATGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1183664..1186847 - |
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