MSTRG.12163.1.p1 (mRNA) -

Overview
NameMSTRG.12163.1.p1
Unique NameMSTRG.12163.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000090_pilon:1180719..1181947+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12163.1.p1 ID=MSTRG.12163.1.p1|Name=MSTRG.12163.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1229bp|location=Sequence derived from alignment at sc0000090_pilon:1180719..1181947+ (Clytia hemisphaerica_ch_hm2_pilon)
AgtgaaaagtgaagaaaacaAGGACAATAAACAAGGATAAAGGAAAGATA
ATGGATTTGTTTGAAGACTTGGATGAAGATCGATGGGAAAATAAAGGCCA
TCCACCTCTCGATCCTTCCAGCATTGGTAAGATATTCTATTCAAAATCAT
GATCATTAGAAAGTGAAATTGTGTATTTAAGAGCAAATGACCCCTTGTTA
GACATTAGTAAGCTTTTTAATCTCTTTTAAAGCGTTATTTGGTTATTGAA
AAGGTTGAGGAGCTCAATTTTTGTGGACACACTGTGTATGCAACATaagc
ttgaaaatattttgggataGTAtctctctctcctctctTACTGACCCTTT
ATAATATCTCTTTTCAGAGGGCTACACATCATATATCGTATTTCAACGGC
AAATTGTAGAAGACGCGAAAACTATGATATTATATTTGAAGACAGAACAA
GGAAGACCGTTGCAAGTCAAACTTTCCAATTTCAAACCGGACAGAAATCC
AATGAAAGGTGTCCGAAATTGTTGTTTGAAAAtatgtgaaaatgaaattg
ttggtATCATGATGGACAGAGATTGGGTAGAAGCAAAATGAGCGACTGGA
TAGTAGTTGAATGAATACAAATTACTTAACGAGTGATTATACGACTGAAT
TGATATTCAACTTTCTTTGTATAtatgttttatttatattttattctgta
aaagaaaatgaagaatttctaTATTTGAGCGGTGGCACGACTCACCatta
gacacccctgtctcacagccccggtggaactttttttctcagtgggaaTA
AAACTTCCTATTGAAATTCCTTTTCTCCAAGGTTACAAAATTCAGTGCAA
ACtcagtgcaatttttaaacattgaatttcgaatgcggTTGAAATTAAAG
TTAATTTCCAAGTGCGGCTGACattctaaggtattttcccaccggagaTG
AAATCTTTGTCAATcttttcagtggggctgggctcccagtgggtctgtgg
caCAGGGGTATAATTAGAAACAACAGTCAGACCCGTTGGAATAACcgtta
aagtggggaggctgaaggctcaaaatgagataaatttcgctaaaattttg
agaaaaaatctcatctgctcaaaagtggggaggctgaagtctccccagtc
tccccgcttccaccGGGACTGACAGTCGCTGTGTCATATGGTTTATTTTC
TAAGTGGGATGCAGCACTTTCAACTGAAA

Coding sequence (CDS) from alignment at sc0000090_pilon:1180719..1181947+

>MSTRG.12163.1.p1 ID=MSTRG.12163.1.p1|Name=MSTRG.12163.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=600bp|location=Sequence derived from alignment at sc0000090_pilon:1180719..1181947+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTGTTTGAAGACTTGGATGAAGATCGATGGGAAAATAAAGGCCA
TCCACCTCTCGATCCTTCCAGCATTGAGGGCTACACATCATATATCGTAT
TTCAACGGCAAATTGTAGAAGACGCGAAAACTATGATATTATATTTGAAG
ACAGAACAAGGAAGACCGTTGCAAGTCAAACTTTCCAATTTCAAACCGGA
CAGAAATCCAATGAAAGGTGTCCGAAATTGTTGTTTGAAAAtatgtgaaa
atgaaattgttggtATCATGATGGACAGAGATTGGGTAGAAGCAAAATGA
ATGGATTTGTTTGAAGACTTGGATGAAGATCGATGGGAAAATAAAGGCCA
TCCACCTCTCGATCCTTCCAGCATTGAGGGCTACACATCATATATCGTAT
TTCAACGGCAAATTGTAGAAGACGCGAAAACTATGATATTATATTTGAAG
ACAGAACAAGGAAGACCGTTGCAAGTCAAACTTTCCAATTTCAAACCGGA
CAGAAATCCAATGAAAGGTGTCCGAAATTGTTGTTTGAAAAtatgtgaaa
atgaaattgttggtATCATGATGGACAGAGATTGGGTAGAAGCAAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12163MSTRG.12163Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12163.1.p1.exon1MSTRG.12163.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12163.1.p1.exon2MSTRG.12163.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12163.1.p1MSTRG.12163.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090_pilongenomesc0000090_pilon:1180719..1181947 +