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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:112231..115573+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12105.1.p1 ID=MSTRG.12105.1.p1|Name=MSTRG.12105.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3343bp|location=Sequence derived from alignment at sc0000090_pilon:112231..115573+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGAAACTCAGCTGCTCATGCTCTTTCCACGAAACCTGGAAGAACTT
TACAGTTGAAAATGGTGTCATGCACATAATAAAATCTAAAGTTGATGTAA
AAGTTGTACGTTTCCTTGTAGATCATCGCTTCCTCACTGATAGAGAAAGC
TATCTTTGTGAGGCTTGTATTGCAAAAacaaaatgtataatttcatctAG
CGACAAAATTTCACATCATCAGCATCTTCATGTTGCTGTGACATCATTCA
CTGACTCGTTAAAAGCATTTTCTACTGATGTAGCCACAGTTGATGATACA
GTTTGGGAGGAATGTTTTAAAACACTTGGCAAATTGGTCTTGCATCCAAG
GATTAGAAAACATGGAACAGTACTTTGTCAAAAATACAATATTAAATATC
TGCAAACAATGAAACCTGAAAATGACATTGGATCATACGATTCTTTCCTT
CTTGCTCTTCTTGTTGGATTATCCAAAAGAGATATTTCTGCTGAACGTAA
AGCACAAGTAAAGTACCAAGTAATAATGATTATGGAGACAATATTCTCGT
TATGTAACCTAAAGTGGATTTTCCCTTACCATTTTGCAGCTAATGTTGTA
CAATCATTTATTTCCGGTTCGAAAATAGTAACTGTACTGAACGGTAAATT
AACACCAGGTGGTGGGTACACAACATATTTAACTTGGCTGAAGGGATTTG
GGAAGCTGCCAATAACATGTATCATTGGGGAGATAATTACATTCATAGAC
AACATTGGCAGATACATCATTAAAAATTACAGAGTTACTAAGGACAAAGT
TGGTGCAGCTGATGTAATTACCACTACTCTCCACATATTACTTAATACAA
CTCAGTCTCTTCAAACAAATGCAAGTTATAAACCAAATCTTTGGGGCATT
AGTTTATCTATGCAGCAAAAACAAGAAATGATGGAAGTATTTATTACAAA
CACTTGTATAATCTTTCGCAGGTGTCGCTATAACTATCTTCACCAGATGA
TTGAATTATTCAAACAGGACGATGATAAAGTAGTATCTGCAAGAGTATCA
CAGTTGATGTCTACTCACACCAGAGTTTGCACAAATGAGGTAGGCACCCT
ACTGTACAACCTTGatattttaaagtgtttttaatTCCTCTTATCTCATT
CATGGCTTTTTATATCATTAAAGTATATATAAATACTTTGCCCACTGGAA
CTTGAAGGAGTAAAGAAATGGCAGGTTGTTAACTAGGTATATAGGcttta
aaaatattagtttGCTTTGTTTGTACCGCTACCAtaatatttttatgttt
cacgtaaaaatttgctttaaaaaaatgaatctttatttaaaaatttttag
aattgcaAGGCACTGTATGGGCCGAGAAAGAGAAAATGCGACAAGTGTAG
TTCTGAAgttaaaagaattgaagaaaccAAAGAGAAAAGGGAGCAGCAAA
CTACATCTGAAGGTGGCAAATATCTCCCTCTTGGTGAAACGCAAAACATC
AACACGTGTCCTATGAAGGTTGGTGAACCAATATTATTCAATCCAAACAG
CTATGAAAACTTGGAACTTATTTTAAAGCAGCTGAAGGAGAACCTTGCCA
TTGGGAGAGGAAGAGAATGGACATTTGTTGGCTGCGATGGCCCACCATAC
TGTTTAGCAAATAGACTCATTGATCGAAACCCAAAGGCATATGATTGGTT
AGCTATGCAACCTGGTCTTGGTCACTTGATATGAACCAAATGAAAGGATT
TTTTAAGGTAAAAAGCACATTTTTCACATTTGAGTTGATTCCTTGGGTGg
tggggccattcaaaaagtggTACGCTCTAAGGGGGAGGGTACCACCAAAA
TTGCATGAAAGTATATGAGGGGGAGGGGAAGGTCAAGTAAAAATGTATGT
ActctttgacatttttcaataaaatggaatttcagccaaaattagGTTAA
ATTTAAGTTAGATGTTCGgattatttcatcaaaaaatcaaaaaaaagttt
aaacagATATTTTTGTAATCTTCCCAATAATCCCAAATTACCTGTGTAGA
GGTGTCCTTTAATCTGACCTATTTCTGAGGGGATACTGCCAAAGCGTACA
AGGCGGTGgtcaattttcaccaattttgaGCAATCGAATTTAAAGATAcc
tattttattattttcagatcATGGACAGAGTGTGCTTTGAACCACTTGTA
CAAGACGTTCTGAACTTCAATTCGACCTATGCATATAATACGTTTATTAG
CTGTACTGATACCCACCGAGCTTGGGaatcttttgaaatctttctcCATG
GTACAGTCCTGGAGCTCATTCGTTTGTGTGTAGAAGATAAGAAGGAATAT
CCTACTCCTGATGGTTTTAACGATTGGCTATTTTTACACAATTCCGCAAC
AACAAGATTTATTTGCCATATAGTGTTAAATTTTGGGCTTGGCAATAATG
ATGCTGATGTTAGTGATGCAGGGCGTTATGCCTTTAACAATTGGTTTTAT
GGGTTTAACCATCCCTTGTATAGAGAAATTGACCACGTGATTTATTAATG
AAATCAACACTTCCTGAAGTAGTAGCAGAACAGACATgacaaaatttaac
attttcatcACACAATGTGAAAAGCAGGAACCAAGGTGGTGACTTCCTTC
TTGAGCAAAAAGTTCAACGTCAAAAGCTAATGGCTCCTAAAGGAGTGGTT
GACAAATTTACTTGGCAGAGGATATCAAGGTCTGTCGATACACTGGACAA
AATATATACAAATGCATGTGAATCTTTACGTTTGTCACCCGATACCAGTA
CAAGAGTTGTACTACTTGGCGAGGAAATGGTTGAGTGGAGAGCTATTTTG
CGACAATCCGGATATCTTGATCATAAAAATCCTCAAACTGTTTATAATAT
ATATGGTGATGTTCTTTGCAATGACCTAGTAAACATTAGATCAAACCTTA
AAGATAAACGTAGGGGGTATTGGCAAGCCCATCTTAATGGAACTTCATTG
GAATCAATAAAGTATGACATGATAAAGATTTTTCCTGAAGATGTTGCGAG
TCCAAGTGAAGactcaaaataatgaaaagttttattgtATCCAACTCATT
ACCCACCCTTTAGTGTGCTAAAAACCTCATTCAAATGGTCGGGAATCCAA
TCAAagttctttaataattaatcaaacaaagttttttgataattattgtt
tctaaaatttttagatcTTTTTGTTCTTAATCTTCACTCAATTTTGGGGA
AAAGCAAGCCTAACGATATACACTTTAtaatgccccccccccttggTTAA
GCACAAAAGTGTAAGCAAGATTTTAGGTTTAGGCCTGAAGGTG Coding sequence (CDS) from alignment at sc0000090_pilon:112231..115573+ >MSTRG.12105.1.p1 ID=MSTRG.12105.1.p1|Name=MSTRG.12105.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2946bp|location=Sequence derived from alignment at sc0000090_pilon:112231..115573+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGAAACTCAGCTGCTCATGCTCTTTCCACGAAACCTGGAAGAACTT
TACAGTTGAAAATGGTGTCATGCACATAATAAAATCTAAAGTTGATGTAA
AAGTTGTACGTTTCCTTGTAGATCATCGCTTCCTCACTGATAGAGAAAGC
TATCTTTGTGAGGCTTGTATTGCAAAAacaaaatgtataatttcatctAG
CGACAAAATTTCACATCATCAGCATCTTCATGTTGCTGTGACATCATTCA
CTGACTCGTTAAAAGCATTTTCTACTGATGTAGCCACAGTTGATGATACA
GTTTGGGAGGAATGTTTTAAAACACTTGGCAAATTGGTCTTGCATCCAAG
GATTAGAAAACATGGAACAGTACTTTGTCAAAAATACAATATTAAATATC
TGCAAACAATGAAACCTGAAAATGACATTGGATCATACGATTCTTTCCTT
CTTGCTCTTCTTGTTGGATTATCCAAAAGAGATATTTCTGCTGAACGTAA
AGCACAAGTAAAGTACCAAGTAATAATGATTATGGAGACAATATTCTCGT
TATGTAACCTAAAGTGGATTTTCCCTTACCATTTTGCAGCTAATGTTGTA
CAATCATTTATTTCCGGTTCGAAAATAGTAACTGTACTGAACGGTAAATT
AACACCAGGTGGTGGGTACACAACATATTTAACTTGGCTGAAGGGATTTG
GGAAGCTGCCAATAACATGTATCATTGGGGAGATAATTACATTCATAGAC
AACATTGGCAGATACATCATTAAAAATTACAGAGTTACTAAGGACAAAGT
TGGTGCAGCTGATGTAATTACCACTACTCTCCACATATTACTTAATACAA
CTCAGTCTCTTCAAACAAATGCAAGTTATAAACCAAATCTTTGGGGCATT
AGTTTATCTATGCAGCAAAAACAAGAAATGATGGAAGTATTTATTACAAA
CACTTGTATAATCTTTCGCAGGTGTCGCTATAACTATCTTCACCAGATGA
TTGAATTATTCAAACAGGACGATGATAAAGTAGTATCTGCAAGAGTATCA
CAGTTGATGTCTACTCACACCAGAGTTTGCACAAATGAGaattgcaAGGC
ACTGTATGGGCCGAGAAAGAGAAAATGCGACAAGTGTAGTTCTGAAgtta
aaagaattgaagaaaccAAAGAGAAAAGGGAGCAGCAAACTACATCTGAA
GGTGGCAAATATCTCCCTCTTGGTGAAACGCAAAACATCAACACGTGTCC
TATGAAGGTTGGTGAACCAATATTATTCAATCCAAACAGCTATGAAAACT
TGGAACTTATTTTAAAGCAGCTGAAGGAGAACCTTGCCATTGGGAGAGGA
AGAGAATGGACATTTGTTGGCTGCGATGGCCCACCATACTGTTTAGCAAA
TAGACTCATTGATCGAAACCCAAAGGCATATGATTGGTTAGCTATGCAAC
CTGGTCTTGGTCACTTGATATGAAAAAAGAAACTCAGCTGCTCATGCTCT
TTCCACGAAACCTGGAAGAACTTTACAGTTGAAAATGGTGTCATGCACAT
AATAAAATCTAAAGTTGATGTAAAAGTTGTACGTTTCCTTGTAGATCATC
GCTTCCTCACTGATAGAGAAAGCTATCTTTGTGAGGCTTGTATTGCAAAA
acaaaatgtataatttcatctAGCGACAAAATTTCACATCATCAGCATCT
TCATGTTGCTGTGACATCATTCACTGACTCGTTAAAAGCATTTTCTACTG
ATGTAGCCACAGTTGATGATACAGTTTGGGAGGAATGTTTTAAAACACTT
GGCAAATTGGTCTTGCATCCAAGGATTAGAAAACATGGAACAGTACTTTG
TCAAAAATACAATATTAAATATCTGCAAACAATGAAACCTGAAAATGACA
TTGGATCATACGATTCTTTCCTTCTTGCTCTTCTTGTTGGATTATCCAAA
AGAGATATTTCTGCTGAACGTAAAGCACAAGTAAAGTACCAAGTAATAAT
GATTATGGAGACAATATTCTCGTTATGTAACCTAAAGTGGATTTTCCCTT
ACCATTTTGCAGCTAATGTTGTACAATCATTTATTTCCGGTTCGAAAATA
GTAACTGTACTGAACGGTAAATTAACACCAGGTGGTGGGTACACAACATA
TTTAACTTGGCTGAAGGGATTTGGGAAGCTGCCAATAACATGTATCATTG
GGGAGATAATTACATTCATAGACAACATTGGCAGATACATCATTAAAAAT
TACAGAGTTACTAAGGACAAAGTTGGTGCAGCTGATGTAATTACCACTAC
TCTCCACATATTACTTAATACAACTCAGTCTCTTCAAACAAATGCAAGTT
ATAAACCAAATCTTTGGGGCATTAGTTTATCTATGCAGCAAAAACAAGAA
ATGATGGAAGTATTTATTACAAACACTTGTATAATCTTTCGCAGGTGTCG
CTATAACTATCTTCACCAGATGATTGAATTATTCAAACAGGACGATGATA
AAGTAGTATCTGCAAGAGTATCACAGTTGATGTCTACTCACACCAGAGTT
TGCACAAATGAGaattgcaAGGCACTGTATGGGCCGAGAAAGAGAAAATG
CGACAAGTGTAGTTCTGAAgttaaaagaattgaagaaaccAAAGAGAAAA
GGGAGCAGCAAACTACATCTGAAGGTGGCAAATATCTCCCTCTTGGTGAA
ACGCAAAACATCAACACGTGTCCTATGAAGGTTGGTGAACCAATATTATT
CAATCCAAACAGCTATGAAAACTTGGAACTTATTTTAAAGCAGCTGAAGG
AGAACCTTGCCATTGGGAGAGGAAGAGAATGGACATTTGTTGGCTGCGAT
GGCCCACCATACTGTTTAGCAAATAGACTCATTGATCGAAACCCAAAGGC
ATATGATTGGTTAGCTATGCAACCTGGTCTTGGTCACTTGATATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000090_pilon | genome | sc0000090_pilon:112231..115573 + |
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