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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:1147819..1151132+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12087.4.p1 ID=MSTRG.12087.4.p1|Name=MSTRG.12087.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3314bp|location=Sequence derived from alignment at sc0000089_pilon:1147819..1151132+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcagctttgctttataacgtccccctcgatttatctcgaatacataa
actcgctattagtTTCAAAATAACGGAAAACTTCGGTCCAATCTAAGAAA
AGTTTCTGGTTATTCTTTTGTCATAATTatcatttaaaagtttaaaaaat
taagatgGATGAAAGAAAGAAGATAAATATAGAATCGTGTAGAAGTGTCA
ACAAAATGCTTTTCGGATACAAGATGAAAACTATAGAGCGAATGGTATGG
AGTTTGGTATTGCTTGTTGTAATAGGATTAGGGCTCACTTTCGGATTCAT
ATATTATCCTATCCATGCAGCTCTGGTGATGGGGAGTGGTACCTTGGTTG
CTGTCGTTCAAAAACTGATGTTCAAACTGTTTGAGAAATCTCCCAAGAAA
AACATGTACACCAGACGATTGTTTTACTTAGGTAAACCTTTTTGATACAC
AACTAGTAAATTATTGTAGCGAGATCAGCTGTCCTTATTTTTGGGCACTT
TAAGACAGAAGGGGTGAAGAGACTTTCTTATGATGCTTAATAGCTAAACA
TTCGCAAAGTATTGGGTCGTGCTATTGAAAGTCGTGGTGAGAAAATGACT
ATactcttttttaaattgaaagtaAAGTGACTCTCCCTCTACCGTATTTA
Tacgagggggtttatctaaagaatcctacatttactaaaaatagacaaaa
aaaacgacaaatttcatattgaaCGACAATTTCGCTGTCCACAACCCCAa
ctgaaagtgactgtaccacctcTGTATTCATTTCTCTTAGTTTATCACGg
gaatacacaggttgcaaaaaaaagttcgaagtcgatcacgcttttactcg
aaattttatGTGTTTGTTATACATGACCTTTATTTCTGATTAGTTCGAAT
TTATTAATACTAATAAagtaattttaaatttgatttgcAATTCTGAgctt
tattgttcttataaaattgttcttataaaataaacaagctagatgctgaa
tggacctacctgacgatgaaagttggatagcaacgcgaggagaaaaaaat
cagtcaaaaaatatagcgcttagcaAAAAGgtataacgcaataaattcat
cattgatggggggagagggaagggttgtaggggaaaaataaatagaaagt
tctggtcgcaaaaatcagttttattgacaattgaatcatgcttgatggtg
agtattgttatcaataatgtttttgtgtgaaaaacatagaaatgaaatga
aaatcttcaaaaacggcgatttccggcattttcaaccgaaaaaaaaaatt
ctaaaaaatcgaactcagccatgttttgagcattgcaaatacgcatcttt
ctgcaaaaaatcagaaaaaaacttttgatgaaaattcgagaaaatgtaaa
aaagccggtttttccggcatatttccggcattttcggccggaaaaaaatg
tttttcgaaaatcgggctacgtcactttttaggtattgtcattttacatc
agtgtgcaaaatttcataaaaaaatataaagtacagctcgagaaattcaa
gaaatactgtttttccggcgaaaatcggctgatccggcaatttttagaaa
gttccggcttcaaaaatcagttttattgaaaattgaaccatggttgatcg
tggacattgctattaacaatgtttttgagtgaaaaaacaaccaattataa
ggaaaaagtccgatgaaaatctgcaaaaaacggcgatttccggcatattc
ggccggaaaagagtttttctcaaaaatcggactctgccatgGTTTGGGCA
TTGccaatacgcatctttgtgcaaaaaatctgaaaaaactaatgaggaaa
tctcgagaaaatgccaaaaaaccggtttttccggcatatttccggcattt
tcggccggaaatgattttttttcgaaaatcgggctccgtcacattttggg
cattaccattttgcaccattgtgccaaaaatcagaaaaaactaatgagcc
aatctcgagaaaagctggtaacagacggacggacgaacgaacagacgaac
ggacgaacggacatcggttaatttataggacctccaaggaaGGTCCAAAA
AAGAGTAGAGACTTGTTTGTAAGGCTTTGTTGCCTGAAAGGACCCAAAAC
CATTTTCGAGTTagggagacattcgagttataaaggttccagttatggag
aTTCTACTGTATATTTTTACTTTTAGGTGGAATTATACGTGGTTTGTTGA
TGTGCGCCTTACTATATTTACTTAAAGAATGGTATTCATCACATGTGTTG
GTAGTGATCACTACGTGGCATTTCACAAGTCTCTTTGTTTTGTTAACCAA
GGACATCTCAAATGACGAGGAAAGAGAGCTTGCAAGGACTAAGGTTTTTT
attaattgtttTCtttttctgtTACTTATACAATTCTAAAGTAATTATAT
CGTAGACATCTGACAATTACAGGTATAGGAAGAAATTTGCGATGAAAGTT
ACACAACCCCGGGTCGCAACAATATTTgtcttcttaaaaaaacaagctaA
TGTGTAACCAAATAAATATTCCGAGTAAAACTGAATTCATCATTGCTTTC
TCTTAAATTCCAGTTAATGCCTCAACAAGCTTTCACTATGGAGGATGACG
CGGATTCTATTCCAACGATTAGCGGAGAGCATGCGTGGAGAGAACCACAA
GAGATTCATTTCTGTGATGGTGGTGGTAATGGCTTTGGATTATCTCAAGA
TGAACGTGGAGAACTGTGTAAACATCAGTCATGAGTTCAAAACGAATTTG
GTTCTAAATGAGGCATACGGTTTTGTTTTGCGAAATTTCGAAGGGATAAT
AGTATAAATAAAGTATATTGCATAACGTTGATGTACTCCATGtaatacac
cccttctcacagacctactggGGACCCTTCCcaatggaaaaattgtccaa
aatattgtcccTGGTgggaaattatcctccaatttttgtccccactaaaa
ataatcaaataaaccaatcctcactactAAATGTTAAGCTATTTTTCCCA
TACCCACGcagaattttctgacttgaaaactaaagaattgaaatccccag
ccataaaaaatatgggaatatcaatgcccatcgagtttcagtccgttact
gGACGGAAAATcctaccggggctgtgagaagggggtgtatgtAATTATCG
TAGGAATTATGTAACTATATCATTAGTATTTCCAAACACAGATCAgatat
tctcttttttttctcgcGATCCCGAAAAtcgcttttttttctttttctga
aatcAGCTAAAAAG Coding sequence (CDS) from alignment at sc0000089_pilon:1147819..1151132+ >MSTRG.12087.4.p1 ID=MSTRG.12087.4.p1|Name=MSTRG.12087.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1845bp|location=Sequence derived from alignment at sc0000089_pilon:1147819..1151132+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGATGAAAGAAAGAAGATAAATATAGAATCGTGTAGAAGTGTCAACAA
AATGCTTTTCGGATACAAGATGAAAACTATAGAGCGAATGGTATGGAGTT
TGGTATTGCTTGTTGTAATAGGATTAGGGCTCACTTTCGGATTCATATAT
TATCCTATCCATGCAGCTCTGGTGATGGGGAGTGGTACCTTGGTTGCTGT
CGTTCAAAAACTGATGTTCAAACTGTTTGAGAAATCTCCCAAGAAAAACA
TGTACACCAGACGATTGTTTTACTTAGGTGGAATTATACGTGGTTTGTTG
ATGTGCGCCTTACTATATTTACTTAAAGAATGGTATTCATCACATGTGTT
GGTAGTGATCACTACGTGGCATTTCACAAGTCTCTTTGTTTTGTTAACCA
AGGACATCTCAAATGACGAGGAAAGAGAGCTTGCAAGGACTAAGTTAATG
CCTCAACAAGCTTTCACTATGGAGGATGACGCGGATTCTATTCCAACGAT
TAGCGGAGAGCATGCGTGGAGAGAACCACAAGAGATTCATTTCTGTGATG
GTGGTGGTAATGGCTTTGGATTATCTCAAGATGAACGTGGAGAACTGTGT
AAACATCAGTCATGAatgGATGAAAGAAAGAAGATAAATATAGAATCGTG
TAGAAGTGTCAACAAAATGCTTTTCGGATACAAGATGAAAACTATAGAGC
GAATGGTATGGAGTTTGGTATTGCTTGTTGTAATAGGATTAGGGCTCACT
TTCGGATTCATATATTATCCTATCCATGCAGCTCTGGTGATGGGGAGTGG
TACCTTGGTTGCTGTCGTTCAAAAACTGATGTTCAAACTGTTTGAGAAAT
CTCCCAAGAAAAACATGTACACCAGACGATTGTTTTACTTAGGTGGAATT
ATACGTGGTTTGTTGATGTGCGCCTTACTATATTTACTTAAAGAATGGTA
TTCATCACATGTGTTGGTAGTGATCACTACGTGGCATTTCACAAGTCTCT
TTGTTTTGTTAACCAAGGACATCTCAAATGACGAGGAAAGAGAGCTTGCA
AGGACTAAGTTAATGCCTCAACAAGCTTTCACTATGGAGGATGACGCGGA
TTCTATTCCAACGATTAGCGGAGAGCATGCGTGGAGAGAACCACAAGAGA
TTCATTTCTGTGATGGTGGTGGTAATGGCTTTGGATTATCTCAAGATGAA
CGTGGAGAACTGTGTAAACATCAGTCATGAatgGATGAAAGAAAGAAGAT
AAATATAGAATCGTGTAGAAGTGTCAACAAAATGCTTTTCGGATACAAGA
TGAAAACTATAGAGCGAATGGTATGGAGTTTGGTATTGCTTGTTGTAATA
GGATTAGGGCTCACTTTCGGATTCATATATTATCCTATCCATGCAGCTCT
GGTGATGGGGAGTGGTACCTTGGTTGCTGTCGTTCAAAAACTGATGTTCA
AACTGTTTGAGAAATCTCCCAAGAAAAACATGTACACCAGACGATTGTTT
TACTTAGGTGGAATTATACGTGGTTTGTTGATGTGCGCCTTACTATATTT
ACTTAAAGAATGGTATTCATCACATGTGTTGGTAGTGATCACTACGTGGC
ATTTCACAAGTCTCTTTGTTTTGTTAACCAAGGACATCTCAAATGACGAG
GAAAGAGAGCTTGCAAGGACTAAGTTAATGCCTCAACAAGCTTTCACTAT
GGAGGATGACGCGGATTCTATTCCAACGATTAGCGGAGAGCATGCGTGGA
GAGAACCACAAGAGATTCATTTCTGTGATGGTGGTGGTAATGGCTTTGGA
TTATCTCAAGATGAACGTGGAGAACTGTGTAAACATCAGTCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:1147819..1151132 + |
|
