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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:1128585..1130058+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12087.3.p1 ID=MSTRG.12087.3.p1|Name=MSTRG.12087.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1474bp|location=Sequence derived from alignment at sc0000089_pilon:1128585..1130058+ (Clytia hemisphaerica_ch_hm2_pilon)
ATAAGcgccttttttttcaaaataacggGAAACTTCTGTCATCCAATCTA
AGAAAAGTTTCTGGTTATTCTTTTCATAATTatcatttaaaagtttaaaa
aattaagatgGATGAAACAAAGAAGATAAATATAGAATCGTGTAGAAGTG
TCAACAAAATGCTTTTCGGATACAAGATGAAAACTATAGAGCGAATGGTA
TGGAGTTTGGTATTGCTTGTTGTAATGGGAACAGGGCTCACTTTCGGATT
CATATATTATCCTATCCATGCAGCTCTGGTGATGGGGAGTGGTACCTTGG
TTGCTGTCATTCATAAACTGATGTTCAAACTGTTTGAGAAATCTCCCAAG
AAAACAGTGTATACCAAACGATTGTTCTACTTGGGTACAATTTTTTGTAT
TGTTGAGATcaactgttcttttttttttggggggggggtcattttaAGAC
AGAAGGGGATGgattataagaaccagtaagatttttatgattgttttttg
agcctcaaattgttctaatAATGTTCTTATTTATCGGGTCTAGTTGAGct
attttaggcgttatacctAATTTTTACTacgacccctaaattgcttgaaa
ttgattttaatttcaggctcagcattgttcttaaattgttcttatttgta
AGGCTTTGTTGCCTGAAAGGACCCAAAACCATTTTCGAGTTAGGGAGAca
ctcgagttatagaggttccagttatggagactctactgtatatttttact
tttaggtGGAATTATACTTGGTTTGTTGATGTGCGCCTTACTATATTTAC
TGAAAGAATGGTATTCATCACATGTGTTGGTAGTGATCACCACGTGGCAT
TTCACAAGTCTCTTTGTTTTGTTAACCAAGGACATCTCAAATGATGAGGA
AAGAGAGCTTGCAAGAACTAAGGTTTTTtattaattgttttctttttctg
ttaCTTATACAATTCTAAAGTAATTATATCGTAGACATCTGACAAGTACA
GGTATAGGAAGAAATTTGCGATGAAAGTTACACAACCCCGGGTCGCAACA
ATATTTgtcttcttaaaaaaacaagctaATGTGTaatcaataaatatttt
gagtaaaactgaaTTCATCATTGCTTTCTCTTAAATTCCAGGTAATGCCT
CAACAAGCTTTCACTATGGAGGATGACGCGGATTCTATTCCAACGATTAG
CGGAGAGCATGCGTGGAGAGAACCACAAGAGATTCATTTCTGTGATGGTG
GTGGTAATGGCTTTGGATTATCTCAAGATGAACGTGGAGAACTGTGTAAA
TATCAATCATGAGTTCAAAACGAATTTGGTTCTAAATGAGGCATACGGTt
ttgttttgtgaaatttcGAAGTGGTAATAGTATAAATAAAGTATATTACA
TAACGTTGAactccatacagggggggggtcaagcctcAGGGTACTAAAGC
ATAGCCTAGAGAGGGTACTtatct Coding sequence (CDS) from alignment at sc0000089_pilon:1128585..1130058+ >MSTRG.12087.3.p1 ID=MSTRG.12087.3.p1|Name=MSTRG.12087.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1845bp|location=Sequence derived from alignment at sc0000089_pilon:1128585..1130058+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGATGAAACAAAGAAGATAAATATAGAATCGTGTAGAAGTGTCAACAA
AATGCTTTTCGGATACAAGATGAAAACTATAGAGCGAATGGTATGGAGTT
TGGTATTGCTTGTTGTAATGGGAACAGGGCTCACTTTCGGATTCATATAT
TATCCTATCCATGCAGCTCTGGTGATGGGGAGTGGTACCTTGGTTGCTGT
CATTCATAAACTGATGTTCAAACTGTTTGAGAAATCTCCCAAGAAAACAG
TGTATACCAAACGATTGTTCTACTTGGgtGGAATTATACTTGGTTTGTTG
ATGTGCGCCTTACTATATTTACTGAAAGAATGGTATTCATCACATGTGTT
GGTAGTGATCACCACGTGGCATTTCACAAGTCTCTTTGTTTTGTTAACCA
AGGACATCTCAAATGATGAGGAAAGAGAGCTTGCAAGAACTAAGGTAATG
CCTCAACAAGCTTTCACTATGGAGGATGACGCGGATTCTATTCCAACGAT
TAGCGGAGAGCATGCGTGGAGAGAACCACAAGAGATTCATTTCTGTGATG
GTGGTGGTAATGGCTTTGGATTATCTCAAGATGAACGTGGAGAACTGTGT
AAATATCAATCATGAatgGATGAAACAAAGAAGATAAATATAGAATCGTG
TAGAAGTGTCAACAAAATGCTTTTCGGATACAAGATGAAAACTATAGAGC
GAATGGTATGGAGTTTGGTATTGCTTGTTGTAATGGGAACAGGGCTCACT
TTCGGATTCATATATTATCCTATCCATGCAGCTCTGGTGATGGGGAGTGG
TACCTTGGTTGCTGTCATTCATAAACTGATGTTCAAACTGTTTGAGAAAT
CTCCCAAGAAAACAGTGTATACCAAACGATTGTTCTACTTGGgtGGAATT
ATACTTGGTTTGTTGATGTGCGCCTTACTATATTTACTGAAAGAATGGTA
TTCATCACATGTGTTGGTAGTGATCACCACGTGGCATTTCACAAGTCTCT
TTGTTTTGTTAACCAAGGACATCTCAAATGATGAGGAAAGAGAGCTTGCA
AGAACTAAGGTAATGCCTCAACAAGCTTTCACTATGGAGGATGACGCGGA
TTCTATTCCAACGATTAGCGGAGAGCATGCGTGGAGAGAACCACAAGAGA
TTCATTTCTGTGATGGTGGTGGTAATGGCTTTGGATTATCTCAAGATGAA
CGTGGAGAACTGTGTAAATATCAATCATGAatgGATGAAACAAAGAAGAT
AAATATAGAATCGTGTAGAAGTGTCAACAAAATGCTTTTCGGATACAAGA
TGAAAACTATAGAGCGAATGGTATGGAGTTTGGTATTGCTTGTTGTAATG
GGAACAGGGCTCACTTTCGGATTCATATATTATCCTATCCATGCAGCTCT
GGTGATGGGGAGTGGTACCTTGGTTGCTGTCATTCATAAACTGATGTTCA
AACTGTTTGAGAAATCTCCCAAGAAAACAGTGTATACCAAACGATTGTTC
TACTTGGgtGGAATTATACTTGGTTTGTTGATGTGCGCCTTACTATATTT
ACTGAAAGAATGGTATTCATCACATGTGTTGGTAGTGATCACCACGTGGC
ATTTCACAAGTCTCTTTGTTTTGTTAACCAAGGACATCTCAAATGATGAG
GAAAGAGAGCTTGCAAGAACTAAGGTAATGCCTCAACAAGCTTTCACTAT
GGAGGATGACGCGGATTCTATTCCAACGATTAGCGGAGAGCATGCGTGGA
GAGAACCACAAGAGATTCATTTCTGTGATGGTGGTGGTAATGGCTTTGGA
TTATCTCAAGATGAACGTGGAGAACTGTGTAAATATCAATCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:1128585..1130058 + |
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