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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:1075742..1079861+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12084.1.p1 ID=MSTRG.12084.1.p1|Name=MSTRG.12084.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4120bp|location=Sequence derived from alignment at sc0000089_pilon:1075742..1079861+ (Clytia hemisphaerica_ch_hm2_pilon)
TagttttgaaatggaaatttgatGATCTCTTCTTTGAGGAGTATCATCAT
TTGGTACACAgaacatttttccaatttcactgtcaatgtttttgtaaaaa
actttgTGCATAATATAAAGCAATCTGCGTTAGTACATACAATATACTCT
TCCAACCAGCTTCTGTTCAACTGGTTCTCCAATAACAACGAATTGCTTTC
AATTAACTAAGTAGCTCTTACACCATTCATACATATCACCAGAAATACCG
ATTGCGAGTAGCTTTTTCAGGAGAGTTTCACGGCAAACGCTGTCAAATGC
CTTGCTAAAGTCGATTAGTAAGACACCAATAACCTTGCCATTATCTAGTA
AGGTTGACCATCTTCCACACATGTGCAGTAACAGTAGCTCCGGTGATCTA
ACCTTTGAAATCCCCACTGATGATTACTGAGGAGCTGGTGGTGATAAACG
TGGTCGTCGATATCTGTTGTGATAAGTGATTCGAGAACTTTTCCTGGTAG
GCACAGCAATGATATGGGTCGATAGTTTTCACACTTGGTCTTTGCACCCT
TATTTTTGAAGATACACTTAACTTTTGCAACTTAATGGCTGGTTGGAAAT
ACGCAAGTTTCGAAGCTGGATTTAGCAACGTAGTGGAGTCCTGGTAGGAT
ATCTTCACCAATTATCCTGACGATTTTTGAGCTCACTCCATCATGACCTC
CAGCTTTGTTTGGTTTGAATACACCATTAAATGTTCTACTTAGTTTGTAA
AAGTTGTAGTTGATGTGCAGCAAAGTTGGTGTTACCTGATAGACATGACT
TTGCAGTTTGGCGTTTTCAGGAATTTTGTTTACCTTACCGATGTTTGTGA
AGTAGTTGTTCAGAATTTCACATTTAGCAGAATCGCTTGTGGTCAGGACC
CCTTTTTCGTCCTCAAGGGGACCAATACTGTTCTTTTTGCTCTTACTAAT
AAATTCGTTTATACTGTTCCAAAAGCTCTTACTTGAAGGTGAAATGCCTT
GAAATTTCTCTCTCCAATATTTGGCTTCAGCAGtttttttAGCCCTTCGA
TAGAGTTTCCATTCATGTGAGTCTTTGGGTGTCTTTTGGGCCTTTTTCAA
CAGTTTGAATCTGATGTTGAGTTGTTTTCGAATTTGACCATTGATCCATG
GATGCGACTTGTGTCTAATTTTAGCTTTTCGAGTTTTCAGATGTTCGCTC
ACTACATTCTTGTACAATCCTTCCCAAACAAAAAGAGTGTCATCTACATT
GTCAAATATGTCGAAAATTTGCCAGGGAGCTACTGCAATGTCGTTTTTTA
ATTTAGCAGTATCAATGTTTTTATAGTTGTAAACAGTTCTTTATATTGGT
TTATCTTTTATTTGAATAGCCGAGAAGGAGCAGTAGATAAGATGATGGTC
AGAAATGGCAGGATCAATTGAATGGGAATTGTTTATTTTATGTTTGCATC
TGGCTGGTACAATAATATGATCAATCAGAGTTTTTGAGGTATCTGTTATG
CGTGTGGGTTCGTTAATGGTATTCTGCAAGTTGTGTTTGTACAATAGAGA
GTTGAAGAGGTTACGAATGGGTGCACTTGATTGGTTCCCATCTTGtcttt
tgataaaagtgatcatTTTATTTTGAGCCAAATTAACTAAACTAataatc
tcatttttatacCATGGAAGAAGGTAAACTTGAAATAGGACTTTAAATTT
GCTAATTTAgataaatcataaaatcaaaaaccaCAAGAGTACCGAAATTC
Agtggctagttcgaaacacgggtcacgtgttacattgaaattatatttat
tCATACTCAGAGTGATGCAGGGGATATAATaagatatgatttaacaatgG
CTGTACTATCGTTTTCTTGAGAAAGCTCTGTTTTCAGGTGATGGGAATTG
TAAAATGTATATTACTTACATATCCCATATAACATGCATACAGcactaaa
agtgtattattgataatataagcttgTTACATGTATGTAGTATGTTACGG
TGTTTTCTTGTCTGCGTTGTACACGacgcaaacttcgaaagcacgtggaa
agcacgtggttagattttgactttttaaatagtcatacgtGGATAAAACA
CCTTCAAATCGttttttttCAACAAGTTTTAgcgtttttaaaacattttc
tgtttgaattactttgatcaGAGCtgcccctttaccccgtgccccgtgac
ctcgtaacccctgccccgtaacccatgccctgtgacccggacccgtgttt
cgaactagccggaaGTTCAGttttttttACCGAATAGTCCATGGTAAAAA
GTGCTTGAAAGATACCCTGTTTTAGACCTCCCCTTAAGTGTGTGTCTTTT
AATAAAAGGCTCGATAATTTCCATAAAATGTTACATTAGATATAATAGGT
AATTATGGTATAAGAACCAAGtatcaattttggcaaaattttatattatg
ttgcaaaaaaatcagctgttttgagaaaaatgtccAGAGAAAACAAAGTC
CTGAGAAGACcaaaatttgtgttccctgtgTCAAAATTAGTACATACATG
GGGTGGAGGGAtgcaaaaagcaaaagattcTAGAAAACCCTTTAAGTATT
AATTATATAtctgtctgagattttagtacaaATTCCCCCTCCCCTATTAA
AACAAGAATTGAAGTAAAtgagtgaaaaaatttctgaaatctagATTGAA
AAATAGATTCTTCAACTAAAAAGGTTATGTCGCTAGTTGCAAATTACAGC
TGCTCTTCGAGTGAAGAATCAGAAACTGAGGACGGATCAGAGGAAAAGCA
AGAaaacagaaaagagaaagaaattCCTCCATTTTCGTCAACAGATGGCT
CATCAGATGAAGAAAGTGAATCTGAAGTAAACAAACTTCCACTCCCTTCT
GCTATCTTGAAACAGAAAGGTGAACATAAACTCCCCGAATTGAACGTTAA
TAAACGGAAATTATCACAAAATTCAATATTCTCAGATCCTTTTGCACAAT
CAAATGCAAGTATAGAACAGACACTTTCTAAACATAAACGACTTACTGAA
ACCAAGGATCAGGAACCAAATCAGCGTCAGAgaaaaaagcaagctaaaga
atctgaagtaaagaaaacaaaactttgtgtaaaatttttcaaaagcgGGA
CTTGTAAATTTGGAGATAAATGTAAATTTGCTCATAAACTGTTGAGCCAA
CAAGAACACAGTATGGAATTTAAAGAACCAAATATTGTAAGTCAACCAGA
ccttgttaaaaagaaaaagaaaaagaacaattttatggcTTCAACGAATG
ATCCAAATAGTGACGATGAAGGACAGTCTATAAGTAAAAAGAAGAGACCA
GGGCTTAGTAACAATTTAGTACCTGGAAAAAAGGTACTACAAAACTATGA
TAAACTATGTAGATAGCATATTTACATTTCTaaacattttgtaaattttt
ctttaaattattaGTATTTACATATGTCAATGTTCTTATATTGGGTGCGC
Caatagaaaattaattttaaagagagaaacttttttgtggcgcacccggt
atataagaGGAGATCCAAATCTGTTAACTTAATCTGTCTCCTTAATTTGA
ACAAACTCTCTGACCTCTTCTGCTCAAATGCCTGTAAACATATCTCTGTG
ACTCTTAAGCGAAACAAGTTTGTGTTCTCTGAGAGTTTTTGAGTTTATAT
AAACCCTCTTCACTCTATTTAGATTTTTAATCTGGCTCTGTTATCCTTtg
atcgtgttcaaaaataaaggcctgttttgtgacattttcaaagtggctga
caattttgttaataaaatgagtatttttggtggttaacagtttatttttt
caccaagcaTAAGTAGAACGATTAACCTTTCCAATTGTTTTGGAGCGAAA
TTAAGTGGCTCactaggttacaagatatttcaagataagctATGAGTCGT
TTATGTGGCTGCCAACACTGGTGGCTTTTTGAAACCAAccagtttcaaaa
tgttgctcctttatctgttttgagataATACGATACCTCTAGTTAGCGAT
TCAagtgtcattttcaaacaaaccatttcctcctttgaggtggctgacaa
aacacatatttggacatatt Coding sequence (CDS) from alignment at sc0000089_pilon:1075742..1079861+ >MSTRG.12084.1.p1 ID=MSTRG.12084.1.p1|Name=MSTRG.12084.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000089_pilon:1075742..1079861+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGCTAGTTGCAAATTACAGCTGCTCTTCGAGTGAAGAATCAGAAAC
TGAGGACGGATCAGAGGAAAAGCAAGAaaacagaaaagagaaagaaattC
CTCCATTTTCGTCAACAGATGGCTCATCAGATGAAGAAAGTGAATCTGAA
GTAAACAAACTTCCACTCCCTTCTGCTATCTTGAAACAGAAAGGTGAACA
TAAACTCCCCGAATTGAACGTTAATAAACGGAAATTATCACAAAATTCAA
TATTCTCAGATCCTTTTGCACAATCAAATGCAAGTATAGAACAGACACTT
TCTAAACATAAACGACTTACTGAAACCAAGGATCAGGAACCAAATCAGCG
TCAGAgaaaaaagcaagctaaagaatctgaagtaaagaaaacaaaacttt
gtgtaaaatttttcaaaagcgGGACTTGTAAATTTGGAGATAAATGTAAA
TTTGCTCATAAACTGTTGAGCCAACAAGAACACAGTATGGAATTTAAAGA
ACCAAATATTGTAAGTCAACCAGAccttgttaaaaagaaaaagaaaaaga
acaattttatggcTTCAACGAATGATCCAAATAGTGACGATGAAGGACAG
TCTATAAGTAAAAAGAAGAGACCAGGGCTTAGTAACAATTTAGTACCTGG
AAAAAAGGTACTACAAAACTATGATAAACTATGTAGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:1075742..1079861 + |
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