MSTRG.12072.3.p1 (mRNA) -

Overview
NameMSTRG.12072.3.p1
Unique NameMSTRG.12072.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000089_pilon:925069..926287+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12072.3.p1 ID=MSTRG.12072.3.p1|Name=MSTRG.12072.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1219bp|location=Sequence derived from alignment at sc0000089_pilon:925069..926287+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGATAACATTGCAGATGTTTGCATTCCACAAGCATTAACTGTGGCAGCT TTGGAGCCCATCAACGCTTCTCCTATGGGTGAAGGTTCAACATCTGCAAC ATCATCATCAGCTCCAAGTTATCGAAATATTTATACTTACCTGAGCGCAA TCACAAGAGGTGCGGAAGGGCCTGTGCTCAATTCTTCTGAATCTGCTATT GTTCTGAGCATGTTGGAGGATTTGATTCTAACTTTGTCAAAATCACAAAC CCTCATTCAAAGAGAATTTCTACACTCTTCCTACCCTGAACTTCGATCTA TCTTGCAGACACAAGAAGGGCAAGAAGCAAACTCAAGAAATGTTCATTTC AATTCAATCAATCCTTTTGGTGTTCCCTTTGATATTTTAGACTTTCAGCT ATTAGAGCAATGTATGGAAAAAGGGAATACTGCAGCTGTTGACAGTGAAA GTGCAATCGAGAAAAGACCTGCTTCAAGGCAATCAAAAAGGAAAACTAAA GCAAATGACTCTGATGCACAGAAGTCTCCAGTACAAACCAGGTCTAAAAG AAAATCATCTGAAGAAAAGGATACAGACAATGGTGTTTAATaatggaata tatttttttttactcatATCTGGAGACTTAGAAAATGATGTGACAGGAGA TAATGATATATATGACTGATGAAGGGCCACTAAGGTATCCGAGTTTATTT ATatcatctttttcaaaatattttgtcagTAAAGTGTTGCACAAGCGATG GTAATCTTATAACAGATCATTCAGTTCTCTGCTCTAAAGGGACATGGCAA TTTTAACGATCTGACCTGGTTATTCAACCAAAACAATAGAAACCGCGTtg ccttttgcttgaaaacgaaagtattaTTATTGTTAATGTAATGTTATGTA TTGTTATGTATGATTGACAATTGATTTTGGTACGATcattttgctttagc caatgtGCACGCTCAAAAgatcatttaatattcatcccaaatgtggatga aaaaattcaaagcaATGCGCCAACCTTGGTAGATTCTCTTATGGAGCCAT TGCCTTTAGTGAACACATGCGCCATGTGCAAATAATCAGAATATGATCGG AGATTAGATAGATATTCATGTGTTTGATGTAAGGAAGCCTTATTCTTTGA CCtccttttcttttcatctgAAATACTCGAAAACATGGGCAAAATAACAA GGTGTGTAAAGTTAAAAGG

Coding sequence (CDS) from alignment at sc0000089_pilon:925069..926287+

>MSTRG.12072.3.p1 ID=MSTRG.12072.3.p1|Name=MSTRG.12072.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=588bp|location=Sequence derived from alignment at sc0000089_pilon:925069..926287+ (Clytia hemisphaerica_ch_hm2_pilon)
GATAACATTGCAGATGTTTGCATTCCACAAGCATTAACTGTGGCAGCTTT
GGAGCCCATCAACGCTTCTCCTATGGGTGAAGGTTCAACATCTGCAACAT
CATCATCAGCTCCAAGTTATCGAAATATTTATACTTACCTGAGCGCAATC
ACAAGAGGTGCGGAAGGGCCTGTGCTCAATTCTTCTGAATCTGCTATTGT
TCTGAGCATGTTGGAGGATTTGATTCTAACTTTGTCAAAATCACAAACCC
TCATTCAAAGAGAATTTCTACACTCTTCCTACCCTGAACTTCGATCTATC
TTGCAGACACAAGAAGGGCAAGAAGCAAACTCAAGAAATGTTCATTTCAA
TTCAATCAATCCTTTTGGTGTTCCCTTTGATATTTTAGACTTTCAGCTAT
TAGAGCAATGTATGGAAAAAGGGAATACTGCAGCTGTTGACAGTGAAAGT
GCAATCGAGAAAAGACCTGCTTCAAGGCAATCAAAAAGGAAAACTAAAGC
AAATGACTCTGATGCACAGAAGTCTCCAGTACAAACCAGGTCTAAAAGAA
AATCATCTGAAGAAAAGGATACAGACAATGGTGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12072MSTRG.12072Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12072.3.p1.exon1MSTRG.12072.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12072.3.p1.exon2MSTRG.12072.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12072.3.p1MSTRG.12072.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089_pilongenomesc0000089_pilon:925069..926287 +