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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:920768..926287+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12072.1.p1 ID=MSTRG.12072.1.p1|Name=MSTRG.12072.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5520bp|location=Sequence derived from alignment at sc0000089_pilon:920768..926287+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTCGAACAACGTATCCTAAATCCTAAAATGAACCGTAGCTCGATCAAA
GGACGATTGTGAAATCGAGGAAATGCGCGCGAAAGCTcgctgaaaatcaa
aacaaaccaacaaaatggccgacaacaaaaaacaaggaaaatcaagaaag
agaaaaacaacaaacgaaaagaaTACCAGTTTACAATCAACACTATGGAC
CTACGAtgagaaacaaaaatttgtatCAGGTATTTACTTTTActatgaaa
gtgaaaattatagATAGGCGTTTCCTGGACTGAAAGCGAAAGTAAAATTG
ACCTGTACTCAATTAATCGAAATATACAAGTTTACGTCTAAACTCTCTGC
TCATTCATCAAGACAAACCtttttttGCTCAGtcatcacaaatatcttcg
ttttgcGTCGCCCCACAGTCTAGCAAAAAGTTAattcttctttcaaaaaa
aagactataatttgttcACCTTtattattcttgcagcttcccaacatcca
agctctcaaacatcataagtcaaatgaaattacttttgatttcccgtaga
aattatgcaatgaaaaatccgggggtcaataaatgaagactttcttttCC
GCCCAAGATTTCTTTACTTATAACAAATTATTACGTTTCaatatatttgt
taaatataatttttgattacaaaaatactttacatattgtatttaaagtt
taaaaaagtagattctacttagttctttgttttcatgtctagCCCCCGTC
Taaaaagaagtcccagaatcccgagattttggcagtcgggcgttcaaacc
aaaggcgtttttatttttccgcctacttacgaatttttcttttaaaaaat
aggcatttaaaatatcaagtttaaaaataatagtataaaCCCTTATTTTC
TACCGTATAGTCCTtcttctaaaatgaaaaaacaaaatacactagaaaat
tacgagtgttatcaagccacccaaaatgaactttcattcgtTGCGCGTCA
TCGAACTGTTTTATCCGTCacgatctattgtcaaccattgtcaaccattg
tccaatcccgtaagcgattgaaTTGCTGTAagtaataatctgagaaagAG
AACTTAATAatattatgacatcacacaaataaattacgaTGGGAAAGTCC
GCGAATCGAAGACAACACGCggtcttaacatttttcccTTGCAAGTTTGG
GGgaaacgaaagtactctatatttttACGTATAgggaagtgtaagaaaga
tttacaaaatagaaaagtttcgttttggggtaaagaatcagtattgtgaa
tttaagcgagtttctattttgcaatttttctacagagcgaaataaaaatt
tttctattgttcttgctcgattgcctctCAGGATGAGTTCTGTAGGAATG
AGGCTACCGAGACATAATGTGACAAATTTGCGGGAAAACAAAATTGAGGA
TTGAGAATTGAGTCAGTGAGTcagtaaatttgtcggactttttctgtcaa
tgacgtttccttctttcaaaagtttaatTATTGCCAAGTTTTTGTGAGCG
ATTTTTAGCGCATTTGAAACaatttgactttgtttatcattacatgcccC
ATTTTGGGTCAGAGGTCCAATGTTCAAAAGTCATAATTAAAAACCACCCA
TAACatgcggttgttttggctgctggctggctgacTGCCCAGTTAACACC
CATTACCGCCTCACAGACCAATTTTAAGAATActcgaaaatttttacgac
AGACCAACTgactgactcactttttagacccaacaagGAGGACgtgaaat
gaagatatttgtgattgccgccttaggacttgaaaaattaaaattcttcc
TGTCATGTGTTGGATgccaaaaatgcattaaaataTCCTTGGTTTCAGAT
TTTGTTATTGTAGTCTCTCTTAAACTTGTAGCACCAAAAACCATTGACTT
TagtcaggctagctctaaagctttAAAACAACATCTAATAacaaccagaa
tatgattcttcaatgggaatcaaaactatacagtaaagtgcacttacaaa
catcaataagtcagatctaacaaaattaataacagcactgtcatcattga
caatagaacaaaggattttctgtcaagagccttgtaaacattccaacaac
ttccatggTAATGATGTAACAGCTACTAAGTCTACCACTTTAGTGCGGTC
tcaggattgagccgagaacgctcacAGAATGCCCGCAAGCTCCCGCTCAG
GTGacaaacttcaatctgtcaatcattttctcaagcgaagagtacgcaaa
gcaattctagctttacgatagtgccgcagaCAGCCgcagatcatcagtgg
atagcattcaattattattatccctttattttcaaaaaagttgtattttt
cctactctattcacatactgaatttgaaagatcttctatgtgacgttttt
ttgcaaacttcaaaactgatttttgtctcGCTTTTGCGGAAATTTAGCTT
AAGTGCTtacgtgcagcatagggtacaaagtccaaatatgagtttcctgt
aatttttttatgaagagttaggtctataatATAAGTGTATTAAAAGTTCT
TTAGAAACATGTTGGAAGTTTTCACAGATAATCAAGATTCTTTTCTAAGC
AAATTCTGGGTTGCTCAAAATTCTTCAACAGTTGTTAAACATCTGCCGAT
AAATGCTAAGAAAAAGCACaacaaatttcttcctttgatTTGCTACACTT
TGTACCATTCTTCTTTGTGACTTATGTGTAAAAACTTTATTAACAGATCA
TTAATTTCATATTTGATACTAAACTTGGATTTGTTGTGAACTCGGTCAAT
TGGATAACAAAAGGAAAATATAACAGATTCTTATCAATATTTCTTTTAGA
TAGGAACATTTCTTTCAGATAGGAATATTTGGCCAGTTCCTGTATGCGGC
CACAATCAAAAAGGTCATaaataatttcataaaaaaattacatttgcCTC
tttttttGAATATCTACCCCAATGGCTAGCCACAATGGCTGAGCTATTCC
TAGCATCAGAATAGTTTTGCAAAATACTTTTGATTGTGGTAGATTTTAGC
AATGCAAGATCTCCTTTCCTTGCAAGTAGATTAAATAATGGCAGTCTGTC
TTGATTTGCTTTCTCTTTTACAGTActtatttcttttgaaatatctagtt
ttccaatttcaaaatcttttcaaaatctttaagaAATTTCAGTTGTCAAA
GTTGGATCCAACTCCATTTTCTgttaacctttttctttattaacAATGAG
TCTAAATATGTACACAATTTGATATCCACTAATTCTCCTTGAGCATACTA
TATTCATTCAGttggtagatttattgatgaccTTTGCGCTATTAATGATT
TTTTCTCATGTTATAATGATTATCCAGAGGAGCTACAATAAATTGAAAGT
TGAACATTATGTAACACATGCAATATTTTTTAATCTTGACATAAAcattg
aaaataacatctttcACTACAAGTTGTTAACAACAATTCTCGTTTTGAGA
ATGCCACATAAGTATAGTAATTTACCATAACATGTTTTACAGAactaatt
gatttttcaagaaaaattgccttttgtaaaaaagccccaccgaaaataca
aaaagaaaaacccaaagtcccacctttacatttgaaaacaaaatcaacaa
accCACCCAGAGTGAGAGGGGGGTGTACACTATAACTCTTTATGATATTC
AATTTTAGGATGCTAAAGTGGGACCTAAAAACTTTCccttaattttttaa
aaaagccaTAAAAGAACCACTTGGATTTAGATCCCGAATCTGATTCCGAG
AAAGTCACCTCACTTTCTCACTTTCAACTGTCTGTTTCTTATCACCCTTT
ACTGTTTTTTATGCAGCTCTTTGTAAAGGACCTCCATATCGACATGAAAA
TGGAAGTATCAACTGGATGCAACTTAAACGATTTATTGGAACCAAAACAT
TGCAAGAAGTTAAGCATTTTGCAAAGACGTTTCATGCTATGGAGCATGGG
ACAGCTTATGAGGAATTCTCAACCAGAGCTGCTATTGATGTCTGGCGTCA
ATTAGCTGAAAAGTCAAAAGGAGAAGGTATTGCACATTTCATTGATTGTA
GATTGTGGGTAGTCACCTGTAGTCACTctgtaatttcattgtttagGTTG
AGTGCtaaatcagcattttttgtcaaaaacacTCCTAGAAGCTAAGGAGA
TGCCTTAGCCattcttgtaatttttttgttctgtTTGACTGCATGATTTA
GGAGATAACATTGCAGATGTTTGCATTCCACAAGCATTAACTGTGGCAGC
TTTGGAGCCCATCAACGCTTCTCCTATGGGTGAAGGTTCAACATCTGCAA
CATCATCATCAGCTCCAAGTTATCGAAATATTTATACTTACCTGAGCGCA
ATCACAAGAGGTGCGGAAGGGCCTGTGCTCAATTCTTCTGAATCTGCTAT
TGTTCTGAGCATGTTGGAGGATTTGATTCTAACTTTGTCAAAATCACAAA
CCCTCATTCAAAGAGAATTTCTACACTCTTCCTACCCTGAACTTCGATCT
ATCTTGCAGACACAAGAAGGGCAAGAAGCAAACTCAAGAAATGTTCATTT
CAATTCAATCAATCCTTTTGGTGTTCCCTTTGATATTTTAGACTTTCAGC
TATTAGAGCAATGTATGGAAAAAGGGAATACTGCAGCTGTTGACAGTGAA
AGTGCAATCGAGAAAAGACCTGCTTCAAGGCAATCAAAAAGGAAAACTAA
AGCAAATGACTCTGATGCACAGAAGTCTCCAGTACAAACCAGGTCTAAAA
GAAAATCATCTGAAGAAAAGGATACAGACAATGGTGTTTAATaatggaat
atatttttttttactcatATCTGGAGACTTAGAAAATGATGTGACAGGAG
ATAATGATATATATGACTGATGAAGGGCCACTAAGGTATCCGAGTTTATT
TATatcatctttttcaaaatattttgtcagTAAAGTGTTGCACAAGCGAT
GGTAATCTTATAACAGATCATTCAGTTCTCTGCTCTAAAGGGACATGGCA
ATTTTAACGATCTGACCTGGTTATTCAACCAAAACAATAGAAACCGCGTt
gccttttgcttgaaaacgaaagtattaTTATTGTTAATGTAATGTTATGT
ATTGTTATGTATGATTGACAATTGATTTTGGTACGATcattttgctttag
ccaatgtGCACGCTCAAAAgatcatttaatattcatcccaaatgtggatg
aaaaaattcaaagcaATGCGCCAACCTTGGTAGATTCTCTTATGGAGCCA
TTGCCTTTAGTGAACACATGCGCCATGTGCAAATAATCAGAATATGATCG
GAGATTAGATAGATATTCATGTGTTTGATGTAAGGAAGCCTTATTCTTTG
ACCtccttttcttttcatctgAAATACTCGAAAACATGGGCAAAATAACA
AGGTGTGTAAAGTTAAAAGG Coding sequence (CDS) from alignment at sc0000089_pilon:920768..926287+ >MSTRG.12072.1.p1 ID=MSTRG.12072.1.p1|Name=MSTRG.12072.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2745bp|location=Sequence derived from alignment at sc0000089_pilon:920768..926287+ (Clytia hemisphaerica_ch_hm2_pilon)
atggccgacaacaaaaaacaaggaaaatcaagaaagagaaaaacaacaaa
cgaaaagaaTACCAGTTTACAATCAACACTATGGACCTACGAtgagaaac
aaaaatttgtatCAGCTCTTTGTAAAGGACCTCCATATCGACATGAAAAT
GGAAGTATCAACTGGATGCAACTTAAACGATTTATTGGAACCAAAACATT
GCAAGAAGTTAAGCATTTTGCAAAGACGTTTCATGCTATGGAGCATGGGA
CAGCTTATGAGGAATTCTCAACCAGAGCTGCTATTGATGTCTGGCGTCAA
TTAGCTGAAAAGTCAAAAGGAGAAGGAGATAACATTGCAGATGTTTGCAT
TCCACAAGCATTAACTGTGGCAGCTTTGGAGCCCATCAACGCTTCTCCTA
TGGGTGAAGGTTCAACATCTGCAACATCATCATCAGCTCCAAGTTATCGA
AATATTTATACTTACCTGAGCGCAATCACAAGAGGTGCGGAAGGGCCTGT
GCTCAATTCTTCTGAATCTGCTATTGTTCTGAGCATGTTGGAGGATTTGA
TTCTAACTTTGTCAAAATCACAAACCCTCATTCAAAGAGAATTTCTACAC
TCTTCCTACCCTGAACTTCGATCTATCTTGCAGACACAAGAAGGGCAAGA
AGCAAACTCAAGAAATGTTCATTTCAATTCAATCAATCCTTTTGGTGTTC
CCTTTGATATTTTAGACTTTCAGCTATTAGAGCAATGTATGGAAAAAGGG
AATACTGCAGCTGTTGACAGTGAAAGTGCAATCGAGAAAAGACCTGCTTC
AAGGCAATCAAAAAGGAAAACTAAAGCAAATGACTCTGATGCACAGAAGT
CTCCAGTACAAACCAGGTCTAAAAGAAAATCATCTGAAGAAAAGGATACA
GACAATGGTGTTTAAatggccgacaacaaaaaacaaggaaaatcaagaaa
gagaaaaacaacaaacgaaaagaaTACCAGTTTACAATCAACACTATGGA
CCTACGAtgagaaacaaaaatttgtatCAGCTCTTTGTAAAGGACCTCCA
TATCGACATGAAAATGGAAGTATCAACTGGATGCAACTTAAACGATTTAT
TGGAACCAAAACATTGCAAGAAGTTAAGCATTTTGCAAAGACGTTTCATG
CTATGGAGCATGGGACAGCTTATGAGGAATTCTCAACCAGAGCTGCTATT
GATGTCTGGCGTCAATTAGCTGAAAAGTCAAAAGGAGAAGGAGATAACAT
TGCAGATGTTTGCATTCCACAAGCATTAACTGTGGCAGCTTTGGAGCCCA
TCAACGCTTCTCCTATGGGTGAAGGTTCAACATCTGCAACATCATCATCA
GCTCCAAGTTATCGAAATATTTATACTTACCTGAGCGCAATCACAAGAGG
TGCGGAAGGGCCTGTGCTCAATTCTTCTGAATCTGCTATTGTTCTGAGCA
TGTTGGAGGATTTGATTCTAACTTTGTCAAAATCACAAACCCTCATTCAA
AGAGAATTTCTACACTCTTCCTACCCTGAACTTCGATCTATCTTGCAGAC
ACAAGAAGGGCAAGAAGCAAACTCAAGAAATGTTCATTTCAATTCAATCA
ATCCTTTTGGTGTTCCCTTTGATATTTTAGACTTTCAGCTATTAGAGCAA
TGTATGGAAAAAGGGAATACTGCAGCTGTTGACAGTGAAAGTGCAATCGA
GAAAAGACCTGCTTCAAGGCAATCAAAAAGGAAAACTAAAGCAAATGACT
CTGATGCACAGAAGTCTCCAGTACAAACCAGGTCTAAAAGAAAATCATCT
GAAGAAAAGGATACAGACAATGGTGTTTAAatggccgacaacaaaaaaca
aggaaaatcaagaaagagaaaaacaacaaacgaaaagaaTACCAGTTTAC
AATCAACACTATGGACCTACGAtgagaaacaaaaatttgtatCAGCTCTT
TGTAAAGGACCTCCATATCGACATGAAAATGGAAGTATCAACTGGATGCA
ACTTAAACGATTTATTGGAACCAAAACATTGCAAGAAGTTAAGCATTTTG
CAAAGACGTTTCATGCTATGGAGCATGGGACAGCTTATGAGGAATTCTCA
ACCAGAGCTGCTATTGATGTCTGGCGTCAATTAGCTGAAAAGTCAAAAGG
AGAAGGAGATAACATTGCAGATGTTTGCATTCCACAAGCATTAACTGTGG
CAGCTTTGGAGCCCATCAACGCTTCTCCTATGGGTGAAGGTTCAACATCT
GCAACATCATCATCAGCTCCAAGTTATCGAAATATTTATACTTACCTGAG
CGCAATCACAAGAGGTGCGGAAGGGCCTGTGCTCAATTCTTCTGAATCTG
CTATTGTTCTGAGCATGTTGGAGGATTTGATTCTAACTTTGTCAAAATCA
CAAACCCTCATTCAAAGAGAATTTCTACACTCTTCCTACCCTGAACTTCG
ATCTATCTTGCAGACACAAGAAGGGCAAGAAGCAAACTCAAGAAATGTTC
ATTTCAATTCAATCAATCCTTTTGGTGTTCCCTTTGATATTTTAGACTTT
CAGCTATTAGAGCAATGTATGGAAAAAGGGAATACTGCAGCTGTTGACAG
TGAAAGTGCAATCGAGAAAAGACCTGCTTCAAGGCAATCAAAAAGGAAAA
CTAAAGCAAATGACTCTGATGCACAGAAGTCTCCAGTACAAACCAGGTCT
AAAAGAAAATCATCTGAAGAAAAGGATACAGACAATGGTGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:920768..926287 + |
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