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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:792299..794505+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12064.1.p1 ID=MSTRG.12064.1.p1|Name=MSTRG.12064.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2207bp|location=Sequence derived from alignment at sc0000089_pilon:792299..794505+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTTTGTACTTTTGCATTGAAATTGCATTATTTTATCTCGGCTACTtaga
tttgtttgtttgtttatttttttcttccagtGTAAAAATCGATAAAtcag
aaaaactttgaagatgGCTGGTGgaggtgatgacgtcacaagacTCCTAT
TTCAACGCCAAACGTTCGGAAAGAAAGTCGAACGCAAGATTTGTAAATGT
CTTTTACAATCGAACAACAGAGAATACAAATGTTCTTGGAGAAAGAAACT
AAACAGTAGTTTCAGATATAATGGTCAAATGTATTTGGATCATTTTTCGC
GAttctttcaagggtgtttcaacgAGAAAGGCGAGCCTCATTTTCTCGAT
ACGAAAATCGAAGAGACAAATCGAATGAATGGAATCGATCGATCGCATAT
CGACAGATGGCGGATTGAACATACTCTACTTTTCGAGACTAATTGCGCGG
AGTTGAATGACGGTCAAGGTTTAAAGAAGGGTGCTTATGAGAGACGTTTA
TTTGCTTTATGTAGTGATTCATTCGTGAATGAGTACGCCCTGAAACCCAC
TGGATGGACATTGCTGAAACGTTTTTATTTAGGGTCATCGACGTTCAAAC
ACATGAATTACGAAACACCCTTGGCGCGATTTGTGGTCCGAACGAAAAAG
AAGCCTCGTCAAAATGATCGTGATCTCGTCAtgtttttcgtgatttttac
tATGACACCGTTCCGATTTCACTCGGTTCTCCCTATCAATGAATCTGTTT
TTGGGAAAGTCCAAGACGCTTTCGTCATTAATAACATGGTGATCGTGTAC
TCTGGCAAGACTTATTCTATTTATGATTTAAACGAAATCCTCTCCAGTTC
GTTGACCGATGAACCCGATCAATCTCAGCACAGGAGAATCGGAGAATACC
CTTCTGAATTACCGTTTAATGTGGATCTCAAGAAGCGGCCGGTCATGCTC
TTTCAATTAGAATCATGTAAAGATATCAGAGGTTTCACTTTCGGTGGTTA
TCCTTGGTATTGTCTGGCTAGTTTTCGCGGACACAGCCAGCTGTTGGATT
TGCGGACAGGCGTGAAAGTGGCGACGTTACGTCATGATAGGAATGCTAAC
GTCACATTAGATGACGAAAAGAAAGCTTATTTTCATTTGGATTGTTCTGG
GAGGGTGCTTTCCGTGGAATATGATCAAATTAAGTAAGTTGGCTTTTCTA
TTCGCAAAATaatttgttgcgtgtgttttcACTTAAAAACCTCTCCTCGA
AGTTTTCGACCGTAACATAAAGACTGTTTAATGCTGAGCAACTGAAAAGA
AGGGCTCTTTCTCTTAAGTAAGTGTAGAGTTCCGGGGAAAGAACACAAGA
AGATGAAAACTTTGGCTCCCCGTCGAACTACGGTCGTAAACTTACATATT
ACGAGTTTGCTATGTCAATTAATCCTCTGGAATCAAACGTTGGTCATATC
TGAGTCTTTTGTCTATATAAATTCAACCTTACAGATCACAAATTCAACCT
TATAGATCAACCTTCCTTCTTCCTTTACTAGGTGTTTAAAGATTGTTGAT
AACTCCAAGAGACAAAGTATAGAGTTCAAAACGTGTTTCACCATCAACTA
CTCTACACCTCAAATGACACAAAACGAAAACGCTCCACCGAGATATTCAC
GATCCGGGCGTGCTTATAAAAAGGTGATCATACCTCAGGAGCAAGCTCTA
CCTTCGGAGATCGTCCATAGTTTGGACTACGATAGGGAGTTAGACATTCT
GGCCGTCTTATACACCCGTTACGTGGCATCGGACGTTGAGTCGAACAAGT
ATGTAATCTCGTTATATGAAAATCAGACAGGTCGAGAAATTCGAAATATT
GTTTTACCCCCGTCTGTATCTGATTCGGACGCGTACGATTGGAGTGTTTT
CTTTGAGGATATGTTATTGGTTTGCTGCATGGGAGAGATCGGTGGAAACC
GTCAAACTAATACTGTCTTCGTGTACTCACTACAAGAAGAAGTGCAATGA
GAAATACTGATCGGAATGAGGCTTACATACTTTGCGcggagaaattttgt
tttgtatttAGTGACTCTTTTTagtgaaacttttttttaaaaacttgatt
TGTTGTTAGGTTTTCAGCCGTGCTTCAAAAACAACAGTTGCAAGGAAAAG
CTATGAAACACTTTAAATACGATTGAATATACTCTTGTgtctattgtttt
cattttt Coding sequence (CDS) from alignment at sc0000089_pilon:792299..794505+ >MSTRG.12064.1.p1 ID=MSTRG.12064.1.p1|Name=MSTRG.12064.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3078bp|location=Sequence derived from alignment at sc0000089_pilon:792299..794505+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGCTGGTGgaggtgatgacgtcacaagacTCCTATTTCAACGCCAAAC
GTTCGGAAAGAAAGTCGAACGCAAGATTTGTAAATGTCTTTTACAATCGA
ACAACAGAGAATACAAATGTTCTTGGAGAAAGAAACTAAACAGTAGTTTC
AGATATAATGGTCAAATGTATTTGGATCATTTTTCGCGAttctttcaagg
gtgtttcaacgAGAAAGGCGAGCCTCATTTTCTCGATACGAAAATCGAAG
AGACAAATCGAATGAATGGAATCGATCGATCGCATATCGACAGATGGCGG
ATTGAACATACTCTACTTTTCGAGACTAATTGCGCGGAGTTGAATGACGG
TCAAGGTTTAAAGAAGGGTGCTTATGAGAGACGTTTATTTGCTTTATGTA
GTGATTCATTCGTGAATGAGTACGCCCTGAAACCCACTGGATGGACATTG
CTGAAACGTTTTTATTTAGGGTCATCGACGTTCAAACACATGAATTACGA
AACACCCTTGGCGCGATTTGTGGTCCGAACGAAAAAGAAGCCTCGTCAAA
ATGATCGTGATCTCGTCAtgtttttcgtgatttttactATGACACCGTTC
CGATTTCACTCGGTTCTCCCTATCAATGAATCTGTTTTTGGGAAAGTCCA
AGACGCTTTCGTCATTAATAACATGGTGATCGTGTACTCTGGCAAGACTT
ATTCTATTTATGATTTAAACGAAATCCTCTCCAGTTCGTTGACCGATGAA
CCCGATCAATCTCAGCACAGGAGAATCGGAGAATACCCTTCTGAATTACC
GTTTAATGTGGATCTCAAGAAGCGGCCGGTCATGCTCTTTCAATTAGAAT
CATGTAAAGATATCAGAGGTTTCACTTTCGGTGGTTATCCTTGGTATTGT
CTGGCTAGTTTTCGCGGACACAGCCAGCTGTTGGATTTGCGGACAGGCGT
GAAAGTGGCGACGTTACGTCATGATAGGAATGCTAACGTCACATTAGATG
ACGAAAAGAAAGCTTATTTTCATTTGGATTGTTCTGGGAGGGTGCTTTCC
GTGGAATATGATCAAATTAAGTGTTTAAAGATTGTTGATAACTCCAAGAG
ACAAAGTATAGAGTTCAAAACGTGTTTCACCATCAACTACTCTACACCTC
AAATGACACAAAACGAAAACGCTCCACCGAGATATTCACGATCCGGGCGT
GCTTATAAAAAGGTGATCATACCTCAGGAGCAAGCTCTACCTTCGGAGAT
CGTCCATAGTTTGGACTACGATAGGGAGTTAGACATTCTGGCCGTCTTAT
ACACCCGTTACGTGGCATCGGACGTTGAGTCGAACAAGTATGTAATCTCG
TTATATGAAAATCAGACAGGTCGAGAAATTCGAAATATTGTTTTACCCCC
GTCTGTATCTGATTCGGACGCGTACGATTGGAGTGTTTTCTTTGAGGATA
TGTTATTGGTTTGCTGCATGGGAGAGATCGGTGGAAACCGTCAAACTAAT
ACTGTCTTCGTGTACTCACTACAAGAAGAAGTGCAATGAatgGCTGGTGg
aggtgatgacgtcacaagacTCCTATTTCAACGCCAAACGTTCGGAAAGA
AAGTCGAACGCAAGATTTGTAAATGTCTTTTACAATCGAACAACAGAGAA
TACAAATGTTCTTGGAGAAAGAAACTAAACAGTAGTTTCAGATATAATGG
TCAAATGTATTTGGATCATTTTTCGCGAttctttcaagggtgtttcaacg
AGAAAGGCGAGCCTCATTTTCTCGATACGAAAATCGAAGAGACAAATCGA
ATGAATGGAATCGATCGATCGCATATCGACAGATGGCGGATTGAACATAC
TCTACTTTTCGAGACTAATTGCGCGGAGTTGAATGACGGTCAAGGTTTAA
AGAAGGGTGCTTATGAGAGACGTTTATTTGCTTTATGTAGTGATTCATTC
GTGAATGAGTACGCCCTGAAACCCACTGGATGGACATTGCTGAAACGTTT
TTATTTAGGGTCATCGACGTTCAAACACATGAATTACGAAACACCCTTGG
CGCGATTTGTGGTCCGAACGAAAAAGAAGCCTCGTCAAAATGATCGTGAT
CTCGTCAtgtttttcgtgatttttactATGACACCGTTCCGATTTCACTC
GGTTCTCCCTATCAATGAATCTGTTTTTGGGAAAGTCCAAGACGCTTTCG
TCATTAATAACATGGTGATCGTGTACTCTGGCAAGACTTATTCTATTTAT
GATTTAAACGAAATCCTCTCCAGTTCGTTGACCGATGAACCCGATCAATC
TCAGCACAGGAGAATCGGAGAATACCCTTCTGAATTACCGTTTAATGTGG
ATCTCAAGAAGCGGCCGGTCATGCTCTTTCAATTAGAATCATGTAAAGAT
ATCAGAGGTTTCACTTTCGGTGGTTATCCTTGGTATTGTCTGGCTAGTTT
TCGCGGACACAGCCAGCTGTTGGATTTGCGGACAGGCGTGAAAGTGGCGA
CGTTACGTCATGATAGGAATGCTAACGTCACATTAGATGACGAAAAGAAA
GCTTATTTTCATTTGGATTGTTCTGGGAGGGTGCTTTCCGTGGAATATGA
TCAAATTAAGTGTTTAAAGATTGTTGATAACTCCAAGAGACAAAGTATAG
AGTTCAAAACGTGTTTCACCATCAACTACTCTACACCTCAAATGACACAA
AACGAAAACGCTCCACCGAGATATTCACGATCCGGGCGTGCTTATAAAAA
GGTGATCATACCTCAGGAGCAAGCTCTACCTTCGGAGATCGTCCATAGTT
TGGACTACGATAGGGAGTTAGACATTCTGGCCGTCTTATACACCCGTTAC
GTGGCATCGGACGTTGAGTCGAACAAGTATGTAATCTCGTTATATGAAAA
TCAGACAGGTCGAGAAATTCGAAATATTGTTTTACCCCCGTCTGTATCTG
ATTCGGACGCGTACGATTGGAGTGTTTTCTTTGAGGATATGTTATTGGTT
TGCTGCATGGGAGAGATCGGTGGAAACCGTCAAACTAATACTGTCTTCGT
GTACTCACTACAAGAAGAAGTGCAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:792299..794505 + |
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