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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:696179..699152+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12047.9.p2 ID=MSTRG.12047.9.p2|Name=MSTRG.12047.9.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2974bp|location=Sequence derived from alignment at sc0000089_pilon:696179..699152+ (Clytia hemisphaerica_ch_hm2_pilon)
ACCAGAGTCCTTTATGAGGATCATTAATTCTATTTGTTATTAACAATTTA
CCTTACCATTTAAATTCTTAGAATCAGTTTATGCCTAGTagcaaattatt
tgaaaaattataaaaaatggaGGACATGGATTGGCTagatgaaagtgaaa
atttagaaaatgatttcaattctttgaaacataaacatacaaaggtaaat
acttttttaagaatttttgattttctctcaGTCTAAGCACTTTGTtgatt
caagttcattttggaagaaacaatGTCTTGTAAAAATCAGTACCAATGAT
AAATAATCAATTGTATGTCTAGGCCTTCATGCTGCTTCAGCTTCTTGTTT
ATATATGATGCACACTTCTTTATAAGATTAGTGTTTTTTGGCTGATGGTG
GAGCATTCTATCAAATCTATCAAAGATGTCTGATGAAGTTTGCATAGAGT
TTTCATATTTCACAAATAAAATGTGCTTTAATAACACAACATTACagtaa
ttcttttgaaaaaatgttattttattatATAAGGATGGATTTCGTGAAGG
AATTTCCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGAAGGTT
TCAAATCATctggcatatttttcgaaaaactttCTCATTTCAGAGGGAAA
GTCAGGTAAGTTAATAACTATACAAACTATAAAGCTCTTGAAAAAGACTT
GATGATGTTACTGTTTTACTCCACTTTGTTTCTTCCCCTTCCTCTGCCAT
GTATctgtttttcaattatttataCTTCACATTAAATAAATGGTAGCTGT
ATcaaatatttgtttattttgtttgttttagtgCGATATATATGTTTCTT
ATGAATCAGCCTGCTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTT
GATCACCAAGcttgaagattttgaaaataaccAAAGTCATATTGATGAAA
TAGCTGCTCAGAATAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGT
CATAAGAACACAAGGCATGATTCTATGGATAACACTACAATAGATACACT
TATTGATGGCTTTGATAATATGCAACCCCAAAATGATAATTGTTCTAGCG
AGCAAAAAGAACTTAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAA
GCCAATTCACCCCCCTCGAAAACACATGATACTAGTTATATTTACGAAAA
CTCCCAGAACATCTTTGACAATAAATTAAAGGGAGATTTAGATGAACATA
TTGGAACTATCAAGAATTTAATTGAACATGAAATGACTTTGAtaatgaca
aattttgattccgatacaaaaaatcaaattataaaatgtttaaaaagtat
tgaaaaataGGCATTGTTATTATTTCAAGACAAGACTTGCATTCCCATAT
AAATATAGCTAATATAAACAATGTTTGGTAATGTCGCTTTTATTGCCAGT
GGTGGTGAACAGTTTCTTGTCTCTAATACATAACAACACATGCccctttt
caatattttattatataCTTATCAGTTAATGAAGGTCGAAAACACATATa
ataatttgttaaaaaaataaaccacTTCTCTTGTGTTATTTACAtaatat
tcgaatatttcttttgaTCTTACTCAGAAACACGTAGTGCCGATTCTTCT
CGGAGCAAACCACTTATTTGTGCACTGTTTGTTTTCACAGATGTTTCATT
GCTTTGACATTAAAGGTCTAGTTCTCTAACATGTGTGTTTATTTTTTGCT
ACAACAAGCTTTAGAGCAAGCAGGTGCGCAAGTTGGAGCACAAGTTGGAC
CACATGGCATTGGTGGAGGTGGTGGAGCTGGAAGGTTGATGACTGTTGGT
GGAAGGTTGACGTGTTGGCATGGTGGTGCAGCGCAAGGGGCTGGGGCTGG
TGGAGCACATGGTGGGGCGGCACATGGCATAggTggTggTGCGCATGGTG
GGGAGGGAAAGGTGTGGTGCGCATGGTGGGGCAGCACatggcataggtgg
tggtgcacatggaggggcagcacatggcataggtggtggtgcacatggtg
gagcagcgcatggcataggtggtggtgcgcatggtggggcggcacaaggc
ataggtggtggtgcacatggtggggctgcacatggcatggccattggcat
tggtggaggcatgcatggtggagctgcacatggcatgggtggAGGAGGTG
GTGCGCAACAGCTTGGTCGGCAAGCGGGGTAGCAAGCTCTTGGACATCCA
GCAGGGCATGGTGGGGGAGCTCGAGCAGGTGGTGGGAGAGCAGGTCTACA
ACAAGCTGGTGCACAAGATGGTTGACACATAGGCATTGGTGGTGGTGGAG
GAGGGGGCATGCAACATGCTGGTGCACATGAGGGTTGGCACATAGGCATA
GGGGGTGGAGGTGGTGGCATGCAACAAGCAGGAGCACAAGAGGGCTGACA
AGCtggcataggtggtggggcacatggtggggcggcacatggcatgggtg
gtggggcacatggaggtgcagcacatggcatAGGCATAGGCATTGGTGGT
GGGGCACATGGTGGAGCAGCGCAAGGCATAGGTGGTGGTGCACATGGTGG
AGCAgcacatggcataggtggtggggcacatggaggtgcagcacatggca
tgggtggtggggcacatggaggTgcagcacatggcatgggtgtggggcat
ggaggtgcaGCACATGGCATAGGGGGGGGTCGAGGTGGAGCGTTACAACA
CCCTGGCATAGCTTGACATTGTGATGGACAAGGCATAGGTGCAGCAGGTT
GTGCAGCGATCATGGATGACCAATGACTACAGATTGGTGCGCAGCCAAAG
GCTGGCAtaggtggtggtggtggtggtggaggtggtgCAGCGCAGCAGCT
TGGCTGGCAGGCTGGTGCACATGCGGCAGCACATCCCATTccacatgggt
ttgcacttctCTTCTCGATCTCtt Coding sequence (CDS) from alignment at sc0000089_pilon:696179..699152+ >MSTRG.12047.9.p2 ID=MSTRG.12047.9.p2|Name=MSTRG.12047.9.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2187bp|location=Sequence derived from alignment at sc0000089_pilon:696179..699152+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaGGACATGGATTGGCTagatgaaagtgaaaatttagaaaatgattt
caattctttgaaacataaacatacaaagGATGGATTTCGTGAAGGAATTT
CCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGAAGGTTTCAAA
TCATctggcatatttttcgaaaaactttCTCATTTCAGAGGGAAAGTCAG
tgCGATATATATGTTTCTTATGAATCAGCCTGCTTTTGTGAAAGAAACCG
GAGATCAATTTGAAGCTTTGATCACCAAGcttgaagattttgaaaataac
cAAAGTCATATTGATGAAATAGCTGCTCAGAATAACAGACGGAAGACAGA
AGAAAGAGACTTGGGAGGTCATAAGAACACAAGGCATGATTCTATGGATA
ACACTACAATAGATACACTTATTGATGGCTTTGATAATATGCAACCCCAA
AATGATAATTGTTCTAGCGAGCAAAAAGAACTTAAAAGAGGATGCAGTGA
CTGTAATTGTAAAGAGCAAGCCAATTCACCCCCCTCGAAAACACATGATA
CTAGTTATATTTACGAAAACTCCCAGAACATCTTTGACAATAAATTAAAG
GGAGATTTAGATGAACATATTGGAACTATCAAGAATTTAATTGAACATGA
AATGACTTTGAtaatgacaaattttgattccgatacaaaaaatcaaatta
taaaatgtttaaaaagtattgaaaaataGatggaGGACATGGATTGGCTa
gatgaaagtgaaaatttagaaaatgatttcaattctttgaaacataaaca
tacaaagGATGGATTTCGTGAAGGAATTTCCCAGGGCCAAGATTACATTC
TCCAGACTGCATTCAACGAAGGTTTCAAATCATctggcatatttttcgaa
aaactttCTCATTTCAGAGGGAAAGTCAGtgCGATATATATGTTTCTTAT
GAATCAGCCTGCTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTTGA
TCACCAAGcttgaagattttgaaaataaccAAAGTCATATTGATGAAATA
GCTGCTCAGAATAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGTCA
TAAGAACACAAGGCATGATTCTATGGATAACACTACAATAGATACACTTA
TTGATGGCTTTGATAATATGCAACCCCAAAATGATAATTGTTCTAGCGAG
CAAAAAGAACTTAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAAGC
CAATTCACCCCCCTCGAAAACACATGATACTAGTTATATTTACGAAAACT
CCCAGAACATCTTTGACAATAAATTAAAGGGAGATTTAGATGAACATATT
GGAACTATCAAGAATTTAATTGAACATGAAATGACTTTGAtaatgacaaa
ttttgattccgatacaaaaaatcaaattataaaatgtttaaaaagtattg
aaaaataGatggaGGACATGGATTGGCTagatgaaagtgaaaatttagaa
aatgatttcaattctttgaaacataaacatacaaagGATGGATTTCGTGA
AGGAATTTCCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGAAG
GTTTCAAATCATctggcatatttttcgaaaaactttCTCATTTCAGAGGG
AAAGTCAGtgCGATATATATGTTTCTTATGAATCAGCCTGCTTTTGTGAA
AGAAACCGGAGATCAATTTGAAGCTTTGATCACCAAGcttgaagattttg
aaaataaccAAAGTCATATTGATGAAATAGCTGCTCAGAATAACAGACGG
AAGACAGAAGAAAGAGACTTGGGAGGTCATAAGAACACAAGGCATGATTC
TATGGATAACACTACAATAGATACACTTATTGATGGCTTTGATAATATGC
AACCCCAAAATGATAATTGTTCTAGCGAGCAAAAAGAACTTAAAAGAGGA
TGCAGTGACTGTAATTGTAAAGAGCAAGCCAATTCACCCCCCTCGAAAAC
ACATGATACTAGTTATATTTACGAAAACTCCCAGAACATCTTTGACAATA
AATTAAAGGGAGATTTAGATGAACATATTGGAACTATCAAGAATTTAATT
GAACATGAAATGACTTTGAtaatgacaaattttgattccgatacaaaaaa
tcaaattataaaatgtttaaaaagtattgaaaaataG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:696179..699152 + |
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