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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:696324..698882+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12047.19.p1 ID=MSTRG.12047.19.p1|Name=MSTRG.12047.19.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2559bp|location=Sequence derived from alignment at sc0000089_pilon:696324..698882+ (Clytia hemisphaerica_ch_hm2_pilon)
tgaaaatttagaaaatgatttcaattctttgaaacataaacatacaaagg
taaatacttttttaagaatttttgattttctctcaGTCTAAGCACTTTGT
tgattcaagttcattttggaagaaacaatGTCTTGTAAAAATCAGTACCA
ATGATAAATAATCAATTGTATGTCTAGGCCTTCATGCTGCTTCAGCTTCT
TGTTTATATATGATGCACACTTCTTTATAAGATTAGTGTTTTTTGGCTGA
TGGTGGAGCATTCTATCAAATCTATCAAAGATGTCTGATGAAGTTTGCAT
AGAGTTTTCATATTTCACAAATAAAATGTGCTTTAATAACACAACATTAC
agtaattcttttgaaaaaatgttattttattatATAAGGATGGATTTCGT
GAAGGAATTTCCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGA
AGGTTTCAAATCATctggcatatttttcgaaaaactttCTCATTTCAGAG
GGAAAGTCAGGTAAGTTAATAACTATACAAACTATAAAGCTCTTGAAAAA
GACTTGATGATGTTACTGTTTTACTCCACTTTGTTTCTTCCCCTTCCTCT
GCCATGTATctgtttttcaattatttataCTTCACATTAAATAAATGGTA
GCTGTATcaaatatttgtttattttgtttgttttagtgCGATATATATGT
TTCTTATGAATCAGCCTGCTTTTGTGAAAGAAACCGGAGATCAATTTGAA
GCTTTGATCACCAAGcttgaagattttgaaaataaccAAAGTCATATTGA
TGAAATAGCTGCTCAGAATAACAGACGGAAGACAGAAGAAAGAGACTTGG
GAGGTCATAAGAACACAAGGCATGATTCTATGGATAACACTACAATAGAT
ACACTTATTGATGGCTTTGATAATATGCAACCCCAAAATGATAATTGTTC
TAGCGAGCAAAAAGAACTTAAAAGAGGATGCAGTGACTGTAATTGTAAAG
AGCAAGCCAATTCACCCCCCTCGAAAACACATGATACTAGTTATATTTAC
GAAAACTCCCAGAACATCTTTGACAATAAATTAAAGGGAGATTTAGATGA
ACATATTGGAACTATCAAGAATTTAATTGAACATGAAATGACTTTGAtaa
tgacaaattttgattccgatacaaaaaatcaaattataaaatgtttaaaa
agtattgaaaaataGGCATTGTTATTATTTCAAGACAAGACTTGCATTCC
CATATAAATATAGCTAATATAAACAATGTTTGGTAATGTCGCTTTTATTG
CCAGTGGTGGTGAACAGTTTCTTGTCTCTAATACATAACAACACATGCcc
cttttcaatattttattatataCTTATCAGTTAATGAAGGTCGAAAACAC
ATATaataatttgttaaaaaaataaaccacTTCTCTTGTGTTATTTACAt
aatattcgaatatttcttttgaTCTTACTCAGAAACACGTAGTGCCGATT
CTTCTCGGAGCAAACCACTTATTTGTGCACTGTTTGTTTTCACAGATGTT
TCATTGCTTTGACATTAAAGGTCTAGTTCTCTAACATGTGTGTTTATTTT
TTGCTACAACAAGCTTTAGAGCAAGCAGGTGCGCAAGTTGGAGCACAAGT
TGGACCACATGGCATTGGTGGAGGTGGTGGAGCTGGAAGGTTGATGACTG
TTGGTGGAAGGTTGACGTGTTGGCATGGTGGTGCAGCGCAAGGGGCTGGG
GCTGGTGGAGCACATGGTGGGGCGGCACATGGCATAggTggTggTGCGCA
TGGTGGGGAGGGAAAGGTGTGGTGCGCATGGTGGGGCAGCACatggcata
ggtggtggtgcacatggaggggcagcacatggcataggtggtggtgcaca
tggtggagcagcgcatggcataggtggtggtgcgcatggtggggcggcac
aaggcataggtggtggtgcacatggtggggctgcacatggcatggccatt
ggcattggtggaggcatgcatggtggagctgcacatggcatgggtggAGG
AGGTGGTGCGCAACAGCTTGGTCGGCAAGCGGGGTAGCAAGCTCTTGGAC
ATCCAGCAGGGCATGGTGGGGGAGCTCGAGCAGGTGGTGGGAGAGCAGGT
CTACAACAAGCTGGTGCACAAGATGGTTGACACATAGGCATTGGTGGTGG
TGGAGGAGGGGGCATGCAACATGCTGGTGCACATGAGGGTTGGCACATAG
GCATAGGGGGTGGAGGTGGTGGCATGCAACAAGCAGGAGCACAAGAGGGC
TGACAAGCtggcataggtggtggggcacatggtggggcggcacatggcat
gggtggtggggcacatggaggtgcagcacatggcatAGGCATAGGCATTG
GTGGTGGGGCACATGGTGGAGCAGCGCAAGGCATAGGTGGTGGTGCACAT
GGTGGAGCAgcacatggcataggtggtggggcacatggaggtgcagcaca
tggcatgggtggtggggcacatggaggTgcagcacatggcatgggtgtgg
ggcatggag Coding sequence (CDS) from alignment at sc0000089_pilon:696324..698882+ >MSTRG.12047.19.p1 ID=MSTRG.12047.19.p1|Name=MSTRG.12047.19.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2097bp|location=Sequence derived from alignment at sc0000089_pilon:696324..698882+ (Clytia hemisphaerica_ch_hm2_pilon)
gaaaatttagaaaatgatttcaattctttgaaacataaacatacaaagGA
TGGATTTCGTGAAGGAATTTCCCAGGGCCAAGATTACATTCTCCAGACTG
CATTCAACGAAGGTTTCAAATCATctggcatatttttcgaaaaactttCT
CATTTCAGAGGGAAAGTCAGtgCGATATATATGTTTCTTATGAATCAGCC
TGCTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTTGATCACCAAGc
ttgaagattttgaaaataaccAAAGTCATATTGATGAAATAGCTGCTCAG
AATAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGTCATAAGAACAC
AAGGCATGATTCTATGGATAACACTACAATAGATACACTTATTGATGGCT
TTGATAATATGCAACCCCAAAATGATAATTGTTCTAGCGAGCAAAAAGAA
CTTAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAAGCCAATTCACC
CCCCTCGAAAACACATGATACTAGTTATATTTACGAAAACTCCCAGAACA
TCTTTGACAATAAATTAAAGGGAGATTTAGATGAACATATTGGAACTATC
AAGAATTTAATTGAACATGAAATGACTTTGAtaatgacaaattttgattc
cgatacaaaaaatcaaattataaaatgtttaaaaagtattgaaaaataGg
aaaatttagaaaatgatttcaattctttgaaacataaacatacaaagGAT
GGATTTCGTGAAGGAATTTCCCAGGGCCAAGATTACATTCTCCAGACTGC
ATTCAACGAAGGTTTCAAATCATctggcatatttttcgaaaaactttCTC
ATTTCAGAGGGAAAGTCAGtgCGATATATATGTTTCTTATGAATCAGCCT
GCTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTTGATCACCAAGct
tgaagattttgaaaataaccAAAGTCATATTGATGAAATAGCTGCTCAGA
ATAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGTCATAAGAACACA
AGGCATGATTCTATGGATAACACTACAATAGATACACTTATTGATGGCTT
TGATAATATGCAACCCCAAAATGATAATTGTTCTAGCGAGCAAAAAGAAC
TTAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAAGCCAATTCACCC
CCCTCGAAAACACATGATACTAGTTATATTTACGAAAACTCCCAGAACAT
CTTTGACAATAAATTAAAGGGAGATTTAGATGAACATATTGGAACTATCA
AGAATTTAATTGAACATGAAATGACTTTGAtaatgacaaattttgattcc
gatacaaaaaatcaaattataaaatgtttaaaaagtattgaaaaataGga
aaatttagaaaatgatttcaattctttgaaacataaacatacaaagGATG
GATTTCGTGAAGGAATTTCCCAGGGCCAAGATTACATTCTCCAGACTGCA
TTCAACGAAGGTTTCAAATCATctggcatatttttcgaaaaactttCTCA
TTTCAGAGGGAAAGTCAGtgCGATATATATGTTTCTTATGAATCAGCCTG
CTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTTGATCACCAAGctt
gaagattttgaaaataaccAAAGTCATATTGATGAAATAGCTGCTCAGAA
TAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGTCATAAGAACACAA
GGCATGATTCTATGGATAACACTACAATAGATACACTTATTGATGGCTTT
GATAATATGCAACCCCAAAATGATAATTGTTCTAGCGAGCAAAAAGAACT
TAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAAGCCAATTCACCCC
CCTCGAAAACACATGATACTAGTTATATTTACGAAAACTCCCAGAACATC
TTTGACAATAAATTAAAGGGAGATTTAGATGAACATATTGGAACTATCAA
GAATTTAATTGAACATGAAATGACTTTGAtaatgacaaattttgattccg
atacaaaaaatcaaattataaaatgtttaaaaagtattgaaaaataG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:696324..698882 + |
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