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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:696282..698882+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12047.18.p3 ID=MSTRG.12047.18.p3|Name=MSTRG.12047.18.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2601bp|location=Sequence derived from alignment at sc0000089_pilon:696282..698882+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaattataaaaaatggaGGACATGGATTGGCTagatgaaagtgaaaatt
tagaaaatgatttcaattctttgaaacataaacatacaaaggtaaatact
tttttaagaatttttgattttctctcaGTCTAAGCACTTTGTtgattcaa
gttcattttggaagaaacaatGTCTTGTAAAAATCAGTACCAATGATAAA
TAATCAATTGTATGTCTAGGCCTTCATGCTGCTTCAGCTTCTTGTTTATA
TATGATGCACACTTCTTTATAAGATTAGTGTTTTTTGGCTGATGGTGGAG
CATTCTATCAAATCTATCAAAGATGTCTGATGAAGTTTGCATAGAGTTTT
CATATTTCACAAATAAAATGTGCTTTAATAACACAACATTACagtaattc
ttttgaaaaaatgttattttattatATAAGGATGGATTTCGTGAAGGAAT
TTCCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGAAGGTTTCA
AATCATctggcatatttttcgaaaaactttCTCATTTCAGAGGGAAAGTC
AGGTAAGTTAATAACTATACAAACTATAAAGCTCTTGAAAAAGACTTGAT
GATGTTACTGTTTTACTCCACTTTGTTTCTTCCCCTTCCTCTGCCATGTA
TctgtttttcaattatttataCTTCACATTAAATAAATGGTAGCTGTATc
aaatatttgtttattttgtttgttttagtgCGATATATATGTTTCTTATG
AATCAGCCTGCTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTTGAT
CACCAAGcttgaagattttgaaaataaccAAAGTCATATTGATGAAATAG
CTGCTCAGAATAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGTCAT
AAGAACACAAGGCATGATTCTATGGATAACACTACAATAGATACACTTAT
TGATGGCTTTGATAATATGCAACCCCAAAATGATAATTGTTCTAGCGAGC
AAAAAGAACTTAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAAGCC
AATTCACCCCCCTCGAAAACACATGATACTAGTTATATTTACGAAAACTC
CCAGAACATCTTTGACAATAAATTAAAGGGAGATTTAGATGAACATATTG
GAACTATCAAGAATTTAATTGAACATGAAATGACTTTGAtaatgacaaat
tttgattccgatacaaaaaatcaaattataaaatgtttaaaaagtattga
aaaataGGCATTGTTATTATTTCAAGACAAGACTTGCATTCCCATATAAA
TATAGCTAATATAAACAATGTTTGGTAATGTCGCTTTTATTGCCAGTGGT
GGTGAACAGTTTCTTGTCTCTAATACATAACAACACATGCcccttttcaa
tattttattatataCTTATCAGTTAATGAAGGTCGAAAACACATATaata
atttgttaaaaaaataaaccacTTCTCTTGTGTTATTTACAtaatattcg
aatatttcttttgaTCTTACTCAGAAACACGTAGTGCCGATTCTTCTCGG
AGCAAACCACTTATTTGTGCACTGTTTGTTTTCACAGATGTTTCATTGCT
TTGACATTAAAGGTCTAGTTCTCTAACATGTGTGTTTATTTTTTGCTACA
ACAAGCTTTAGAGCAAGCAGGTGCGCAAGTTGGAGCACAAGTTGGACCAC
ATGGCATTGGTGGAGGTGGTGGAGCTGGAAGGTTGATGACTGTTGGTGGA
AGGTTGACGTGTTGGCATGGTGGTGCAGCGCAAGGGGCTGGGGCTGGTGG
AGCACATGGTGGGGCGGCACATGGCATAggTggTggTGCGCATGGTGGGG
AGGGAAAGGTGTGGTGCGCATGGTGGGGCAGCACatggcataggtggtgg
tgcacatggaggggcagcacatggcataggtggtggtgcacatggtggag
cagcgcatggcataggtggtggtgcgcatggtggggcggcacaaggcata
ggtggtggtgcacatggtggggctgcacatggcatggccattggcattgg
tggaggcatgcatggtggagctgcacatggcatgggtggAGGAGGTGGTG
CGCAACAGCTTGGTCGGCAAGCGGGGTAGCAAGCTCTTGGACATCCAGCA
GGGCATGGTGGGGGAGCTCGAGCAGGTGGTGGGAGAGCAGGTCTACAACA
AGCTGGTGCACAAGATGGTTGACACATAGGCATTGGTGGTGGTGGAGGAG
GGGGCATGCAACATGCTGGTGCACATGAGGGTTGGCACATAGGCATAGGG
GGTGGAGGTGGTGGCATGCAACAAGCAGGAGCACAAGAGGGCTGACAAGC
tggcataggtggtggggcacatggtggggcggcacatggcatgggtggtg
gggcacatggaggtgcagcacatggcatAGGCATAGGCATTGGTGGTGGG
GCACATGGTGGAGCAGCGCAAGGCATAGGTGGTGGTGCACATGGTGGAGC
Agcacatggcataggtggtggggcacatggaggtgcagcacatggcatgg
gtggtggggcacatggaggTgcagcacatggcatgggtgtggggcatgga
g Coding sequence (CDS) from alignment at sc0000089_pilon:696282..698882+ >MSTRG.12047.18.p3 ID=MSTRG.12047.18.p3|Name=MSTRG.12047.18.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2187bp|location=Sequence derived from alignment at sc0000089_pilon:696282..698882+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaGGACATGGATTGGCTagatgaaagtgaaaatttagaaaatgattt
caattctttgaaacataaacatacaaagGATGGATTTCGTGAAGGAATTT
CCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGAAGGTTTCAAA
TCATctggcatatttttcgaaaaactttCTCATTTCAGAGGGAAAGTCAG
tgCGATATATATGTTTCTTATGAATCAGCCTGCTTTTGTGAAAGAAACCG
GAGATCAATTTGAAGCTTTGATCACCAAGcttgaagattttgaaaataac
cAAAGTCATATTGATGAAATAGCTGCTCAGAATAACAGACGGAAGACAGA
AGAAAGAGACTTGGGAGGTCATAAGAACACAAGGCATGATTCTATGGATA
ACACTACAATAGATACACTTATTGATGGCTTTGATAATATGCAACCCCAA
AATGATAATTGTTCTAGCGAGCAAAAAGAACTTAAAAGAGGATGCAGTGA
CTGTAATTGTAAAGAGCAAGCCAATTCACCCCCCTCGAAAACACATGATA
CTAGTTATATTTACGAAAACTCCCAGAACATCTTTGACAATAAATTAAAG
GGAGATTTAGATGAACATATTGGAACTATCAAGAATTTAATTGAACATGA
AATGACTTTGAtaatgacaaattttgattccgatacaaaaaatcaaatta
taaaatgtttaaaaagtattgaaaaataGatggaGGACATGGATTGGCTa
gatgaaagtgaaaatttagaaaatgatttcaattctttgaaacataaaca
tacaaagGATGGATTTCGTGAAGGAATTTCCCAGGGCCAAGATTACATTC
TCCAGACTGCATTCAACGAAGGTTTCAAATCATctggcatatttttcgaa
aaactttCTCATTTCAGAGGGAAAGTCAGtgCGATATATATGTTTCTTAT
GAATCAGCCTGCTTTTGTGAAAGAAACCGGAGATCAATTTGAAGCTTTGA
TCACCAAGcttgaagattttgaaaataaccAAAGTCATATTGATGAAATA
GCTGCTCAGAATAACAGACGGAAGACAGAAGAAAGAGACTTGGGAGGTCA
TAAGAACACAAGGCATGATTCTATGGATAACACTACAATAGATACACTTA
TTGATGGCTTTGATAATATGCAACCCCAAAATGATAATTGTTCTAGCGAG
CAAAAAGAACTTAAAAGAGGATGCAGTGACTGTAATTGTAAAGAGCAAGC
CAATTCACCCCCCTCGAAAACACATGATACTAGTTATATTTACGAAAACT
CCCAGAACATCTTTGACAATAAATTAAAGGGAGATTTAGATGAACATATT
GGAACTATCAAGAATTTAATTGAACATGAAATGACTTTGAtaatgacaaa
ttttgattccgatacaaaaaatcaaattataaaatgtttaaaaagtattg
aaaaataGatggaGGACATGGATTGGCTagatgaaagtgaaaatttagaa
aatgatttcaattctttgaaacataaacatacaaagGATGGATTTCGTGA
AGGAATTTCCCAGGGCCAAGATTACATTCTCCAGACTGCATTCAACGAAG
GTTTCAAATCATctggcatatttttcgaaaaactttCTCATTTCAGAGGG
AAAGTCAGtgCGATATATATGTTTCTTATGAATCAGCCTGCTTTTGTGAA
AGAAACCGGAGATCAATTTGAAGCTTTGATCACCAAGcttgaagattttg
aaaataaccAAAGTCATATTGATGAAATAGCTGCTCAGAATAACAGACGG
AAGACAGAAGAAAGAGACTTGGGAGGTCATAAGAACACAAGGCATGATTC
TATGGATAACACTACAATAGATACACTTATTGATGGCTTTGATAATATGC
AACCCCAAAATGATAATTGTTCTAGCGAGCAAAAAGAACTTAAAAGAGGA
TGCAGTGACTGTAATTGTAAAGAGCAAGCCAATTCACCCCCCTCGAAAAC
ACATGATACTAGTTATATTTACGAAAACTCCCAGAACATCTTTGACAATA
AATTAAAGGGAGATTTAGATGAACATATTGGAACTATCAAGAATTTAATT
GAACATGAAATGACTTTGAtaatgacaaattttgattccgatacaaaaaa
tcaaattataaaatgtttaaaaagtattgaaaaataG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:696282..698882 + |
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