MSTRG.12030.1.p1 (mRNA) -

Overview
NameMSTRG.12030.1.p1
Unique NameMSTRG.12030.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000089_pilon:536031..537227-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12030.1.p1 ID=MSTRG.12030.1.p1|Name=MSTRG.12030.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1197bp|location=Sequence derived from alignment at sc0000089_pilon:536031..537227- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAAATAACACTTTGTCATCTGTTTGGTTCCCAGACATTACCTTCTAGT
GAGGGGTGCATAAAAGGTAAAGGATTTCGTTCACGACGTATTGTAGAACA
ACGAACACACACACACACAACATGATTTATATTTTGCTGTTCATTATACC
TTCATGTATCCTCGCAAAACCAAATGGTAAGTCAAATTGAATACCAAGTT
AATGACACAAAATTCTTTGCAAAATTCAAAGTTTTTCTCCTCAGTTTGTT
CAAATTTGAGACTAGTCTACCACTCCTGTTTTTAACTTCTATTCAAGGTT
CGAAATGTAATCGAGATTGAAGAAATTTTACTTGTCATTTCAGTACAATC
ACTGGATCAACGAGAAAGGTTTTCACTGCAACTTATCCCTAAAGAAAACA
CAATTTTCGAGATGGGCGGATATCAGAATCAAGAAATTCACAAACCGGGA
CAGATATCGAACGTCAAAAGAGAACAAGAACAGCCATTAAGTATCGCAGA
ACAGGAAATCCTTTTGAAGTGGTTCAACAGGCGGAAAGCGTTATGTTTGT
GTAAGCGCCACAACCAAAACCCGGAGACTGGTGACGACATGGTTGGCAAA
ACCAATGAAAACGCATGGCGTGGAAAGAGATCCATGGTCTGTGACAAATG
CTGGACTAATCAACAAAAAGGGGCCAAAGCGTGGAGAGGGAGAAGAAAAG
CGAAGAGCGGCTCCGCAGTGAAGAGGAAGGTTGAAGTGCTCAAAATTCCT
GATTGGCTACAAAAATACAACATCTTATAAATTTGTAAACTTTTTACAAG
AAGGTTCGCCCTGTTATTAAGAACTGGCATTTAAAGAAAGGATGAGGGTA
GCAAGTTTTCACGGGAGAAAGTAGGATATAAATTGAACAAAACTAAAAGG
GTATTTCCGTAAAATTATTAAACCGAAAAAACACGCCAAATTTTGCGGGA
AATGAAAACAAGTGAGTCAAACTTACAGTTTGTGTTCTCCCCCATGTTTC
TTCTCTCTGGCGTTTCCTCTCTTCTTTTACTTGGGTTTTCCAGACACCAA
AAACACAGGCCAATGCCATTCATCCATTTTGTATTCAATATTTTAAATTT
ATTTTTTATTTTTATAAATTTTTATTGTTTTATGTTAAATCTGAAGAAAC
AAAACATTGAAGCAATCAAGAAAATGTCTTAAATTAACTGACATTCG

Coding sequence (CDS) from alignment at sc0000089_pilon:536031..537227-

>MSTRG.12030.1.p1 ID=MSTRG.12030.1.p1|Name=MSTRG.12030.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=984bp|location=Sequence derived from alignment at sc0000089_pilon:536031..537227- (Clytia hemisphaerica_ch_hm2_pilon)
TACAATCACTGGATCAACGAGAAAGGTTTTCACTGCAACTTATCCCTAAA
GAAAACACAATTTTCGAGATGGGCGGATATCAGAATCAAGAAATTCACAA
ACCGGGACAGATATCGAACGTCAAAAGAGAACAAGAACAGCCATTAAGTA
TCGCAGAACAGGAAATCCTTTTGAAGTGGTTCAACAGGCGGAAAGCGTTA
TGTTTGTGTAAGCGCCACAACCAAAACCCGGAGACTGGTGACGACATGGT
TGGCAAAACCAATGAAAACGCATGGCGTGGAAAGAGATCCATGGTCTGTG
ACAAATGCTGGACTAATCAACAAAAAGGGGCCAAAGCGTGGAGAGGGAGA
AGAAAAGCGAAGAGCGGCTCCGCAGTGAAGAGGAAGGTTGAAGTGCTCAA
AATTCCTGATTGGCTACAAAAATACAACATCTTATAAATGATTTATATTT
TGCTGTTCATTATACCTTCATGTATCCTCGCAAAACCAAATGTACAATCA
CTGGATCAACGAGAAAGGTTTTCACTGCAACTTATCCCTAAAGAAAACAC
AATTTTCGAGATGGGCGGATATCAGAATCAAGAAATTCACAAACCGGGAC
AGATATCGAACGTCAAAAGAGAACAAGAACAGCCATTAAGTATCGCAGAA
CAGGAAATCCTTTTGAAGTGGTTCAACAGGCGGAAAGCGTTATGTTTGTG
TAAGCGCCACAACCAAAACCCGGAGACTGGTGACGACATGGTTGGCAAAA
CCAATGAAAACGCATGGCGTGGAAAGAGATCCATGGTCTGTGACAAATGC
TGGACTAATCAACAAAAAGGGGCCAAAGCGTGGAGAGGGAGAAGAAAAGC
GAAGAGCGGCTCCGCAGTGAAGAGGAAGGTTGAAGTGCTCAAAATTCCTG
ATTGGCTACAAAAATACAACATCTTATAAATGATTTATATTTTGCTGTTC
ATTATACCTTCATGTATCCTCGCAAAACCAAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12030MSTRG.12030Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12030.1.p1.exon2MSTRG.12030.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12030.1.p1.exon1MSTRG.12030.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12030.1.p1MSTRG.12030.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089_pilongenomesc0000089_pilon:536031..537227 -