|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:499274..504179- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12025.1.p1 ID=MSTRG.12025.1.p1|Name=MSTRG.12025.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4906bp|location=Sequence derived from alignment at sc0000089_pilon:499274..504179- (Clytia hemisphaerica_ch_hm2_pilon)
CCGCCACATTGAGTTAATTTCGATGAAGTTATTTTGGTCTCCAAACAATT
AGCTTCAATTAGTCGCCATAAAGGCCTCGTTAAGTGGATAATATCCCTTT
GATAGATTGGGTTTGACAGGAAACTGGAAACGAGGCTTCATGATTATTTC
AAAGCAGGAAGAAAGTTGTTACCGTAAGATTTCTCTTGGTTTTTAAGACG
ACTCACACTACAAGGGATCTTATTTTGATTTCAAACACGTTTCAAGATTT
GTTGTGAAATTTCAGGAAAATCTCCATAATCTCATGATTATCAGATAAGA
AAAAGGAAGCTTTGCCCATGTGATAATTTCTGGTCATTTTGCGCAAGCAG
GATATTTTCATACAAAACTCTTTCACGCAGGGTTGCAACGTTGTGAAATT
TCTGAAAATGAACTTTATCCTCACCGTACATAACTTTGAGTTTACGAAAA
GAACTTTGGTTGATATGTAGTAAAGTTTGTTATTATGGTTTGGCCTGTTG
TGACAAAAATCTCTCAGGAAGACATAAAAGTAAAGTAAAGTTAAGAAGTG
TTCAATTGTGGGGTAGTACCGAAGAATTCTCTTCAGTAGCAGCTCTGGTG
CAATCATGAAAAAGGCGTTTCTGGAACAGTAGTCTGTTTAGAAGTAAAAA
GTAGCACAGTATTGTTTCATTGCAAAGAATGTAGTTATTTGCAAGTTTAT
TGAAAGACGTCAGCAGAGAGCTATTGTAGCTTTATAGCTAGGCTGGCACC
CATTAACAGATTCATGCTATTCCTTTACTACTTGCGGTTTTGTAGAGGTT
TGTGATTCAGACTTTGTTATAGCTGATCGAGCAACGTAGAAATAGCGTGC
ACAACGTTTAAACTTCTAGGTGTGAAGATGTGTTTTTCGATTGAAGATAA
AAAGGGGGTCTAAAGTCTAAATAGTCTCGAATTTCGTATTTCTTCGATAT
TTGCTAACGTCTATTTGGAAAGGTTCTGAAAAAGAAAAGGAATAAAAATT
GATGAGAAATCAACGTGGTTGTTGTTTTACGCTCGTTACATTTGCATGTG
TGTGTATGAAGAAGTTTAAAATGAAGTTGCACTTCAGTGATTTCGAATTA
CAGAGAGTATTTCATACTTTACAGTACTTTCTAGTTGAGGGGTCCATTAT
TCTAGTTCGAATAATAGAGGTTTGGATTAGAGAGAGTACAAATGTCTTTC
ATCAGTAAAGTTTTTCAAAAAAGTTGATTTCTTTCTTCTAATTTCAGTAA
GAAAGCAAAAGAAACAAGAAAATGTGTGGGATTTGGGCCATCTTTGGTTA
CGATCATCAAGCTTCGTCAGAACTCCATCATGCTCTCCTCATCGCTCACC
GAGGACCGGATTTCTTCCGTATCGAAAGTCTTCCGAACTTCAAACACTCC
TACTTAGCGTTCCATCGACTCTCCATCATGGATAATTTGACAGGACAACA
ACCCATGCGTTTGTATTCACTACCTCACATCCATCTCACGTACAACGGTG
AAATCTATAACTTCAAAGAACTCTTCCAAAAATATGGATTTGAACAAACG
ACATCGTAAGTTAAAAATATTCATTTTGAATTTCACCATGTGAAAAGATT
TCTCGACATCCTTTGCAACCTCAACCATTCAAAACTTCCACAAATGACAC
AAACTGTAAATTGGGCAGTTCTAGTCAATTTCTTCCAAAAGAATGATTTA
ATAAATGAGTTTCCCTCTCTCATAGAATGGACGGTGAGATCATCATTCAT
CTTTACAACAAATTTGGCATGGAGAAAACATTACAATTACTGGATGGAGT
GTTCGCTGTCTCCATTTTTGATTCGGAAAATGGAACTTTCCACATTGGAA
GAGACACATTCGGGGTGCGTCCGTTATTCACGTTACGTCCGGATTCCGGT
GAGTTAGGAGTTTCATCCGAAGCTAAAGGTTTGATTGGTTTGAACAAATC
GAACGGAAAAGCAAGACCTATCAAGCAACTGAAGCCTGGAACCTATGCTA
CCTTCAACATCTGTAAAGAAACTGGCCTCTCTAAATTGTTAGAAGAAAAA
TCTTTCACAGATGTCGACGTTCCACAAGCCTTCGACATTCCAATCACGCT
CACCGATGACGTCAAAGAAAACATCCGCAACCTGTTGACTGATGCTGTCC
GAAAGCGATTGATGGCCGAACGGAGGATAGGATGTTTGCTCTCCGGTGGA
CTTGATTCTAGTCTAGTTGCAGCATTGGTTGTCAAGCTATCCAGAGAAAT
GGGCATCAAATACCCCATCCAAACCTTTTCAATCGGCTTCCCAGGATCAC
CTGATGTAATGAAAGCACGAAAGGTGGCCGAAATGTTGCAGACAGAGCAC
CACGAAGTCCTCATCACACCACAAGAAGCTTTAGATGCTCTTCCTGATGT
AAACTATGCCTTAGAGAGTTATGACATCACCACAAACAGGGCGTCCACAC
CCATGTTTTTGTTGGCCAAATACATCCGCAAAAACACAAACACCGTCGTC
ATTTTCTCCGGCGAAGGATCAGACGAGCTCACTCAAGGTTACATCTACTT
CCACAAAGCACCAACGCCCGAAGCCGCCCATGAAGATTCCAAACGCCTCC
TGCGTGAATTGTACATCTTTGACAACTTGAGGGCGGATCGAACCATCTCC
GCCCATGGATTGGAGCTACGTGTACCTTTCTTGGACAAAGCTTTCACCTC
ATATTACCTCTCCATCGATAAACAACTCGTCCAACCGAAAGATGGCGTCG
AAAAATTCCTCCTTCGCTCGGCGTTTGATGGCCACCTCAAAGGCCTGCTA
CCGGATGAGATCTTATGGCGACCCAAAGAAGCATTTAGTGATGGAATCTC
TCAGAAAACTGATTCATGGTTTTCACACATCCAACGCCATGCAGCTACAC
TTTTCACCAAACAACAACTGGAAGAAGCTGCCGAGAAATTCCCTATCAAC
CCACCTTTCTCCTTCGAAAGCCTGTATTACCGCACCATGTTTGAATCCAA
GTATCCTGGTCAGTGCCATATATTGCCATACTTTTGGATGCCCAGATGGC
AAGAGGGAGATGTGAAAGATCCCTCAGCTAGAGTGCTGACTAACTATAAA
CAATAAACTAAAAATAGAACGTCGTAAAAACAATTATCTAAAAGAAGACT
AGCCAAACAGTTGACCTACATAAAAATAACAATTTATACAGGTAAATTCA
TAAAATGGACTTCCAATTTAATTTATTTTATTGCCAAAAATGGAGCGAAA
TTTTTAGAAACAAAATGTCTTAGGGGTTAATTATTGTTCCAAATATTCCA
ATTTTTTAGGAATTTTATTTTTTGTAACAAGTTGTCATTATTTATTTATA
GACCACTGAATTAATAACAAAAAGAAACTCATTTTTACCGCAATTTGTTG
TCATAATCTTCTGTGGGTGGGAGGCGGCCTTGAAATTCTGCCTGGCGTCA
AACATTTCACGAATTAATTCGAATTTACTTCTTTTTGAGGCTATATTTTC
TTCCGTTGTTATACATAAATATCTCTATATTTTTCAATTTTACTTTATGT
AAAGATTCAAACTCTCCATCTGTTATTTACAAAAAACAAACTATGGTCAA
ATTCAATCCACCCAAAAATCAAACACTACAGCTCAAGAGGTCCGAAAACT
TTTTATACAGTGGGAGTGGGGAGTGTAATAAACATTGTAAGGACTACTGA
AAGGTAGCTGGTCAAAATCGGTTAAAAGAAATTTTGTATCTGGTTGGAAT
GGTCATAAAGTATTAATTAAAATTCATAAAAAACTGATTTTCAACTTAGA
ACCTTGTGCAAATTAGACTTCAAAAGCTAGTCACGATCAAGAATATTTGG
TTTGTAATGAGAAAGGAAACACCTCAGTCAGCAGCAATTTTCCCTACAAA
AGCTTCTTCTAAGAGAGACAAATATGTACAAATATGGGTGATTTTTTGTT
ACGGACTCTGGAATTTGGAGATAAAACCTAATTGTTCAGCAACAATATCG
TGGTTGTACCACGCAATAGACGATATCGGCTTTCCGAATTCTCCCCGAAT
GATTTCCCATGATGCATTGCGCAAAAAATTCACGGAAAGTCAATATCGTC
CGTGAATGTTTTTGCGCAATGTATCATGGGTAATCATTCGGGGAGAATTC
GGAAAGCCGATATCGTCTATTCTATATTGAAGGCATACTCCAACCTTGTC
CCAAGGTACAAAGTGGAGGTGGAGGGCAAAAAAACAAAAAACAAGAAAGT
ACTCATTCTCAGTACTGGTCAAGTACTCTAACTACGTGCCCCCCTGTACT
CCATCCCTCAAATATAAGCGAGTGTGTCTCTCTGACAGGGGTCATATAGC
TAGCAAATTCACCAAATTTTATTCGGATCCCAGTAGATCGTCAAGTTGCA
TAAGTTATCCTGCTGGACTCATAAGTTGAAGTGGAGGTCTAAGTTACCAA
CCCCTTCTTCGAAATTATGTTACGTGCTGGTGACACTTAACCATTTAGAT
TGAAACATATGAACCACCTCTATAAAATTTAAAATAAAAAACTTTGTACC
TGAAATAAAAATGTGTATATACATGTGCTATTTACAAAATATGACATTAT
CAGAAAAAAATAAAAAAATCATTTCATTTTAAACGCAAACAAAACAAAAA
TAAATACATTTATCACTTTCTACTTTTATACAAATTCAATCATACTTATC
GAGAAATCGGGAAACATGACATCATTATTTACAACCGATTCTGATGGATG
CCCCAGCGTCTGGTCGCGCGGTCTAATATTTGTGCGCGCCATTCTTCTTC
CAAGCGCGCGTAACGTTCTTCGCTCAGAAACAAAGGTTTGCCGCGCCTGA
AAGTAAACAAAGAAACATTCAAAAAAAATATGATTCCACCTCAAAAAACC
ATGAAC Coding sequence (CDS) from alignment at sc0000089_pilon:499274..504179- >MSTRG.12025.1.p1 ID=MSTRG.12025.1.p1|Name=MSTRG.12025.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000089_pilon:499274..504179- (Clytia hemisphaerica_ch_hm2_pilon)
AATGGACGGTGAGATCATCATTCATCTTTACAACAAATTTGGCATGGAGA
AAACATTACAATTACTGGATGGAGTGTTCGCTGTCTCCATTTTTGATTCG
GAAAATGGAACTTTCCACATTGGAAGAGACACATTCGGGGTGCGTCCGTT
ATTCACGTTACGTCCGGATTCCGGTGAGTTAGGAGTTTCATCCGAAGCTA
AAGGTTTGATTGGTTTGAACAAATCGAACGGAAAAGCAAGACCTATCAAG
CAACTGAAGCCTGGAACCTATGCTACCTTCAACATCTGTAAAGAAACTGG
CCTCTCTAAATTGTTAGAAGAAAAATCTTTCACAGATGTCGACGTTCCAC
AAGCCTTCGACATTCCAATCACGCTCACCGATGACGTCAAAGAAAACATC
CGCAACCTGTTGACTGATGCTGTCCGAAAGCGATTGATGGCCGAACGGAG
GATAGGATGTTTGCTCTCCGGTGGACTTGATTCTAGTCTAGTTGCAGCAT
TGGTTGTCAAGCTATCCAGAGAAATGGGCATCAAATACCCCATCCAAACC
TTTTCAATCGGCTTCCCAGGATCACCTGATGTAATGAAAGCACGAAAGGT
GGCCGAAATGTTGCAGACAGAGCACCACGAAGTCCTCATCACACCACAAG
AAGCTTTAGATGCTCTTCCTGATGTAAACTATGCCTTAGAGAGTTATGAC
ATCACCACAAACAGGGCGTCCACACCCATGTTTTTGTTGGCCAAATACAT
CCGCAAAAACACAAACACCGTCGTCATTTTCTCCGGCGAAGGATCAGACG
AGCTCACTCAAGGTTACATCTACTTCCACAAAGCACCAACGCCCGAAGCC
GCCCATGAAGATTCCAAACGCCTCCTGCGTGAATTGTACATCTTTGACAA
CTTGAGGGCGGATCGAACCATCTCCGCCCATGGATTGGAGCTACGTGTAC
CTTTCTTGGACAAAGCTTTCACCTCATATTACCTCTCCATCGATAAACAA
CTCGTCCAACCGAAAGATGGCGTCGAAAAATTCCTCCTTCGCTCGGCGTT
TGATGGCCACCTCAAAGGCCTGCTACCGGATGAGATCTTATGGCGACCCA
AAGAAGCATTTAGTGATGGAATCTCTCAGAAAACTGATTCATGGTTTTCA
CACATCCAACGCCATGCAGCTACACTTTTCACCAAACAACAACTGGAAGA
AGCTGCCGAGAAATTCCCTATCAACCCACCTTTCTCCTTCGAAAGCCTGT
ATTACCGCACCATGTTTGAATCCAAGTATCCTGGTCAGTGCCATATATTG
CCATACTTTTGGATGCCCAGATGGCAAGAGGGAGATGTGAAAGATCCCTC
AGCTAGAGTGCTGACTAACTATAAACAATAAATGTGTGGGATTTGGGCCA
TCTTTGGTTACGATCATCAAGCTTCGTCAGAACTCCATCATGCTCTCCTC
ATCGCTCACCGAGGACCGGATTTCTTCCGTATCGAAAGTCTTCCGAACTT
CAAACACTCCTACTTAGCGTTCCATCGACTCTCCATCATGGATAATTTGA
CAGGACAACAACCCATGCGTTTGTATTCACTACCTCACATCCATCTCACG
TACAACGGTGAAATCTATAACTTCAAAGAACTCTTCCAAAAATATGGATT
TGAACAAACGACATCAATGGACGGTGAGATCATCATTCATCTTTACAACA
AATTTGGCATGGAGAAAACATTACAATTACTGGATGGAGTGTTCGCTGTC
TCCATTTTTGATTCGGAAAATGGAACTTTCCACATTGGAAGAGACACATT
CGGGGTGCGTCCGTTATTCACGTTACGTCCGGATTCCGGTGAGTTAGGAG
TTTCATCCGAAGCTAAAGGTTTGATTGGTTTGAACAAATCGAACGGAAAA
GCAAGACCTATCAAGCAACTGAAGCCTGGAACCTATGCTACCTTCAACAT
CTGTAAAGAAACTGGCCTCTCTAAATTGTTAGAAGAAAAATCTTTCACAG
ATGTCGACGTTCCACAAGCCTTCGACATTCCAATCACGCTCACCGATGAC
GTCAAAGAAAACATCCGCAACCTGTTGACTGATGCTGTCCGAAAGCGATT
GATGGCCGAACGGAGGATAGGATGTTTGCTCTCCGGTGGACTTGATTCTA
GTCTAGTTGCAGCATTGGTTGTCAAGCTATCCAGAGAAATGGGCATCAAA
TACCCCATCCAAACCTTTTCAATCGGCTTCCCAGGATCACCTGATGTAAT
GAAAGCACGAAAGGTGGCCGAAATGTTGCAGACAGAGCACCACGAAGTCC
TCATCACACCACAAGAAGCTTTAGATGCTCTTCCTGATGTAAACTATGCC
TTAGAGAGTTATGACATCACCACAAACAGGGCGTCCACACCCATGTTTTT
GTTGGCCAAATACATCCGCAAAAACACAAACACCGTCGTCATTTTCTCCG
GCGAAGGATCAGACGAGCTCACTCAAGGTTACATCTACTTCCACAAAGCA
CCAACGCCCGAAGCCGCCCATGAAGATTCCAAACGCCTCCTGCGTGAATT
GTACATCTTTGACAACTTGAGGGCGGATCGAACCATCTCCGCCCATGGAT
TGGAGCTACGTGTACCTTTCTTGGACAAAGCTTTCACCTCATATTACCTC
TCCATCGATAAACAACTCGTCCAACCGAAAGATGGCGTCGAAAAATTCCT
CCTTCGCTCGGCGTTTGATGGCCACCTCAAAGGCCTGCTACCGGATGAGA
TCTTATGGCGACCCAAAGAAGCATTTAGTGATGGAATCTCTCAGAAAACT
GATTCATGGTTTTCACACATCCAACGCCATGCAGCTACACTTTTCACCAA
ACAACAACTGGAAGAAGCTGCCGAGAAATTCCCTATCAACCCACCTTTCT
CCTTCGAAAGCCTGTATTACCGCACCATGTTTGAATCCAAGTATCCTGGT
CAGTGCCATATATTGCCATACTTTTGGATGCCCAGATGGCAAGAGGGAGA
TGTGAAAGATCCCTCAGCTAGAGTGCTGACTAACTATAAACAATAAATGT
GTGGGATTTGGGCCATCTTTGGTTACGATCATCAAGCTTCGTCAGAACTC
CATCATGCTCTCCTCATCGCTCACCGAGGACCGGATTTCTTCCGTATCGA
AAGTCTTCCGAACTTCAAACACTCCTACTTAGCGTTCCATCGACTCTCCA
TCATGGATAATTTGACAGGACAACAACCCATGCGTTTGTATTCACTACCT
CACATCCATCTCACGTACAACGGTGAAATCTATAACTTCAAAGAACTCTT
CCAAAAATATGGATTTGAACAAACGACATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:499274..504179 - |
|
