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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:431929..436640+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12019.1.p1 ID=MSTRG.12019.1.p1|Name=MSTRG.12019.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4712bp|location=Sequence derived from alignment at sc0000089_pilon:431929..436640+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATATTTCTACTTATTCTTTTAGTGCAACAAGAAAGTTCGCTTTGGAAG
TCACATCAGTAAATGCAAAGgtatatctatctatctatattgATCTTTGA
CCTATTTACTTACTCTTGGCCTATATAAAAGTCGAGATTAAGAGTCTTAC
TCTTGGAAAATTAGAATATTAATCCACCTAGCatcttttttttctagaat
GCAAAGCAATGTGTCACAATGAATGTAGAGACAAAGTCCCATTACCATGC
ATACCCAGTAAGGACACGCCAGGGCGTAAACGAGAAGGCGCTATCGAAAG
CTACATATCTGGATCAGGTTTACAAGTTCCCAAGATTGTCGTAAGTAACC
AAgccatttttactttttcttcttgACCCTTGCAATTGACTGTGAAAAAG
AAGTGCGAGTTTTGTATTTGTATCGTTTCGCTTTGTAATTTTACCTCGTC
GCTAATCCtttgagatgccttggagtttttacaagatacttcactaattg
gtcatttaaagtgatagcgttaaatttaaagaaaaagtaataagattctt
ttattacatcttaaagaccaaccaaatcaaataagagcttgtaaaaactc
tagCTTGTCCCAATTCTTTGGAGACATTACAATAAGAATTTCGTTGGTTT
CTTCTTTTCAGACAACATGTATCGAGGAAGTAGAGAAACGAGGTCTGAGA
GAGCTTGGTATTTACCGCGTACCAGGGTAAGTCATCTTATTTTTCTAAAC
ATCAACATTAATGCTAGTAGGTAATAGTGATAAAAGTTTCTTTCCTTGTA
GAGACAAAATGTGAAAAGACGGGATACAGAACAAACAGAATTTAGtataa
attttgaaagactATCATAAATTTGCTactaaatattcaaattttatgac
GATACATTTTTAATTCATAAAAAAGTATAAGAACACTTCGTATTAACTTG
TAACGTCTAGAACTTTCAAATCTGGAAAGATAGGTTTTAAGCCATGTCAT
GGATCGGTACTTGGGAATaataaatcaatcaaaagatccttctctagata
ccaggggggtgtttttagacatttcaaaggcattcgatcgggtgtggcac
gatggcttactctttaaactcaaatcttatggggtgactggaccgttgct
ttccttaattcgcagctttcttgacgataggcatcagagagttgtgttga
atgggaaaacatctgagtggaagcgaatcaatgcaggggtacctcaaggc
tcgattcttagtccattgttcttcttaatttatattaatgatctcccaga
aaaccttgagtcaaaacccaagatctttgctgacgatacctctttattct
ctcttgtgattgatcaactcttgagccttgatgtacttaacagagatctc
tccaggataactgattgggctcatcaatggaagatgtcttttaaccctga
cccatctaagcaagctgttgaagtctattttacctgtagactcactcctc
ctaatgctccagtaatATCCTTTAATAACTCTAATATCGCGACCAGTGAG
TACCAGAAACATCTTGGTTTATTGCCTTTAGTGTCATACTTTGATACGAA
TGTAGATTATAATTTAAATAACATTTTAATGGTCATTCTGTATATATTTT
TCCTGTAAACAATGTCTAATCTTGGtttaatcttagattcaaaactttct
tttgatggCCATCTAGATGAGAAGAtacaaaaggccaataaaggaattgg
tcttattaaccgacttcgcaagcatgtgcctaggagatctctactaacca
tttataatttttttattaggcctcatcttgattatggtgatatcgtatat
gaccgcccaggaaatgctacctttgtgcagaagtttgaatctattcaata
taatgcctgccttgctataacaggctgttttcgtggaacgtctcaagaaa
aactgtattcagaacttggtcttgaaagtcttgctgacaggcgctttgct
agaagaatgacattcttctatggaattattaacaatttagccccttcgta
tttacgcAACTACCTGtcagtaagacttacagcaccaggtggccttagaa
caagaaatcctatttatcctcttaatatacgaactgagcgtttccgtaac
actttttttccgtactgcatatctcagtggaatgttctgggaggtaatat
acgagatctaccttcaattaaaactttcaaaaaagcaatctatgaatttt
tgagacccaagcaatcccatgtttttgatgttcctgacattcaaggagta
atctttcttaatcgacttcgggtcggtttcagccatctcaacgagcataa
atttagacatggcttccgcgacactttagaccctttctgtggttgccgaa
ctaactctgttgaaaacactcaacactttcttctgcactgctctatatat
tcccatgcaagacaatctttgttcgacaaacttcagaccctaggcattat
ttttcatccgccacttaaccctccttttttctgtcggcttttattatatg
gggatgaaagtttgacttcaaatataaataaatctaaTCTTTGTTCTGTT
GTATAATTTCTTatcgaaactggaaggtttagcggtgctttattttaggc
ttttacctaacaactgtagcttccttctccaagatttttttttctttttt
tttttctattatttatttagttatttatttatttttttacatagtctagt
acctctggcgatataacgttagttcctagcggggggagggactatatttt
atgtttaagtaatgttttgtaatatatgttcctAGTGTACACGTggcttt
gtttcaataaagaaaaaaaaaatcaattcagtTTTAATAGCGAGTAGAAT
GACTTTCtttttttCGCTCAGAATGGACAGAGACGtgaaagaattgaaag
aaaagTTCCTTCGTGGACGAAACCCTGATCTTGTAAGTTTTTGTTATTTC
CACAATCTTCTATCAATGAGAAAAAGTGTGATGTTGTACCATATTGTTCT
TGTTGAGGATTGATTTTGAACCATTTTGCTCtttttttAGAACAAGATTA
ACGACATTCATGTGGTTTGTGGCTGCTTGAAAGATTTCTTACGAGGATTG
AGTGAACCTCTGGTCACATTCACCCTTCATGAATCGTTCATGGTTTCTGC
AGGTGAGTCTGACCCTTCAATCTTCATATTGTGTCCTATGATCGTCTCAA
ATGGAATAGATGCCTCGGTTCGAATCTTCAGTCCAATTTAGTCTTTACAC
TTCAAATCtactgttgtttttttattgactcTTTAAGTAGATCGTCGATG
TCCTTACTACTGCAGTTAGCCTTACTTTCACACGTCGATAACTTTCTTTT
AAAGCGCTGACTGATGAAGATGACAGTTTGAGTGGAATGTATCAATGTGT
TAGTGAGCTCCCACAAGCCAACAGAGAAACGTTAGCAGCCATCGTCATCC
ATCTACAAAAAGTGGCCACTTCTACTGAAACACAAATGTCCGTCTCCAAT
CTCTCTAAAGTGTTTGGACCAACCCTTATTGGACATCGTTCGTCCAACCC
AACCCACATGGAAATGTTAGATGACACAAAAGCGCAACCTGTTGTATGTT
TTTTCGTGTATTTCCATTCTTCGTTATTGTTTCTATAGGTGTGTCCTTTG
TTAGAGAAGCACTCACGAGAAGAAGTTTTTACATGGTGaaacttattttc
aaaatattgtattACTTCGAACAAACGCCCCGggaataattcaatttttt
tagtttttaggaggggcgtttattcgagggggagCTTAAAGAAGGGTGCg
tttttttagatatttgatTATAATTTGGTTTATTTTTCAGGTTGTCACCC
GTCTGTTAGAGATGCCATCGGACTACTGGTCACAGTTGTTGAGCGGAGGA
CCACACGTTCGAACGCCTCCTTACAACCCTCACTATGCTTCAGCCACGCC
CACTACTCCTGAATGCAAACCTGTTCCCACCTCCCGCTTGGGCGCTATCG
ATGACATGACTCCAAGTCGATCCGACCGaaagttcaacgccatgaaCCCA
AGGTAACCCACTCGCAAACGATTCTTTTGTGATAAAGCCATGGCGtttat
ttagaaatttagaACGCCACATGTATATAGCCAAACTGTTAGATATAAGA
AAGGCGTTTGAAATCCAACTTCACTGTTTTGGATTCACCTTGATATTAAA
ACTCTATGACtttattcctttttttctaGACACGCTTCGTCGAAAGATCC
AAAGAGCCATCGATTTTTCAATTCGCCATCCTAAAACCTCATTCATCGGA
TGAAATGAGATGTAGTGTTGTTTTGTAATTAGagataattaattaattta
caagctttattttttattcGTCATTATTAACCTTATAACTATTTCCATAA
TTAGAAAATTTTAGTACttatttttaaaagcttttgtTAATATATGCAAA
TTTTTCGAATCGCATTCGAAAAGTCAGTTACCTACGTGGTAACCAACCCT
TATATCGCTACAACCGACCTTTGTTAAAAACcaatctttttgattttatt
tgattaaaatttcttatatttcCTGAGattatttaacaaaaatatacttt
aaaaaccaaaaagtaCATTTTATGTCATTTTCTTCATGCCAAAAAGGTTC
Tcctcgaaaaat Coding sequence (CDS) from alignment at sc0000089_pilon:431929..436640+ >MSTRG.12019.1.p1 ID=MSTRG.12019.1.p1|Name=MSTRG.12019.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6132bp|location=Sequence derived from alignment at sc0000089_pilon:431929..436640+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTCACAATGAATGTAGAGACAAAGTCCCATTACCATGCATACCCAG
TAAGGACACGCCAGGGCGTAAACGAGAAGGCGCTATCGAAAGCTACATAT
CTGGATCAGGTTTACAAGTTCCCAAGATTGTCACAACATGTATCGAGGAA
GTAGAGAAACGAGGTCTGAGAGAGCTTGGTATTTACCGCGTACCAGGAAT
GGACAGAGACGtgaaagaattgaaagaaaagTTCCTTCGTGGACGAAACC
CTGATCTTAACAAGATTAACGACATTCATGTGGTTTGTGGCTGCTTGAAA
GATTTCTTACGAGGATTGAGTGAACCTCTGGTCACATTCACCCTTCATGA
ATCGTTCATGGTTTCTGCAGCGCTGACTGATGAAGATGACAGTTTGAGTG
GAATGTATCAATGTGTTAGTGAGCTCCCACAAGCCAACAGAGAAACGTTA
GCAGCCATCGTCATCCATCTACAAAAAGTGGCCACTTCTACTGAAACACA
AATGTCCGTCTCCAATCTCTCTAAAGTGTTTGGACCAACCCTTATTGGAC
ATCGTTCGTCCAACCCAACCCACATGGAAATGTTAGATGACACAAAAGCG
CAACCTGTTGTTGTCACCCGTCTGTTAGAGATGCCATCGGACTACTGGTC
ACAGTTGTTGAGCGGAGGACCACACGTTCGAACGCCTCCTTACAACCCTC
ACTATGCTTCAGCCACGCCCACTACTCCTGAATGCAAACCTGTTCCCACC
TCCCGCTTGGGCGCTATCGATGACATGACTCCAAGTCGATCCGACCGaaa
gttcaacgccatgaaCCCAAGACACGCTTCGTCGAAAGATCCAAAGAGCC
ATCGATTTTTCAATTCGCCATCCTAAATGTGTCACAATGAATGTAGAGAC
AAAGTCCCATTACCATGCATACCCAGTAAGGACACGCCAGGGCGTAAACG
AGAAGGCGCTATCGAAAGCTACATATCTGGATCAGGTTTACAAGTTCCCA
AGATTGTCACAACATGTATCGAGGAAGTAGAGAAACGAGGTCTGAGAGAG
CTTGGTATTTACCGCGTACCAGGAATGGACAGAGACGtgaaagaattgaa
agaaaagTTCCTTCGTGGACGAAACCCTGATCTTAACAAGATTAACGACA
TTCATGTGGTTTGTGGCTGCTTGAAAGATTTCTTACGAGGATTGAGTGAA
CCTCTGGTCACATTCACCCTTCATGAATCGTTCATGGTTTCTGCAGCGCT
GACTGATGAAGATGACAGTTTGAGTGGAATGTATCAATGTGTTAGTGAGC
TCCCACAAGCCAACAGAGAAACGTTAGCAGCCATCGTCATCCATCTACAA
AAAGTGGCCACTTCTACTGAAACACAAATGTCCGTCTCCAATCTCTCTAA
AGTGTTTGGACCAACCCTTATTGGACATCGTTCGTCCAACCCAACCCACA
TGGAAATGTTAGATGACACAAAAGCGCAACCTGTTGTTGTCACCCGTCTG
TTAGAGATGCCATCGGACTACTGGTCACAGTTGTTGAGCGGAGGACCACA
CGTTCGAACGCCTCCTTACAACCCTCACTATGCTTCAGCCACGCCCACTA
CTCCTGAATGCAAACCTGTTCCCACCTCCCGCTTGGGCGCTATCGATGAC
ATGACTCCAAGTCGATCCGACCGaaagttcaacgccatgaaCCCAAGACA
CGCTTCGTCGAAAGATCCAAAGAGCCATCGATTTTTCAATTCGCCATCCT
AAATGTGTCACAATGAATGTAGAGACAAAGTCCCATTACCATGCATACCC
AGTAAGGACACGCCAGGGCGTAAACGAGAAGGCGCTATCGAAAGCTACAT
ATCTGGATCAGGTTTACAAGTTCCCAAGATTGTCACAACATGTATCGAGG
AAGTAGAGAAACGAGGTCTGAGAGAGCTTGGTATTTACCGCGTACCAGGA
ATGGACAGAGACGtgaaagaattgaaagaaaagTTCCTTCGTGGACGAAA
CCCTGATCTTAACAAGATTAACGACATTCATGTGGTTTGTGGCTGCTTGA
AAGATTTCTTACGAGGATTGAGTGAACCTCTGGTCACATTCACCCTTCAT
GAATCGTTCATGGTTTCTGCAGCGCTGACTGATGAAGATGACAGTTTGAG
TGGAATGTATCAATGTGTTAGTGAGCTCCCACAAGCCAACAGAGAAACGT
TAGCAGCCATCGTCATCCATCTACAAAAAGTGGCCACTTCTACTGAAACA
CAAATGTCCGTCTCCAATCTCTCTAAAGTGTTTGGACCAACCCTTATTGG
ACATCGTTCGTCCAACCCAACCCACATGGAAATGTTAGATGACACAAAAG
CGCAACCTGTTGTTGTCACCCGTCTGTTAGAGATGCCATCGGACTACTGG
TCACAGTTGTTGAGCGGAGGACCACACGTTCGAACGCCTCCTTACAACCC
TCACTATGCTTCAGCCACGCCCACTACTCCTGAATGCAAACCTGTTCCCA
CCTCCCGCTTGGGCGCTATCGATGACATGACTCCAAGTCGATCCGACCGa
aagttcaacgccatgaaCCCAAGACACGCTTCGTCGAAAGATCCAAAGAG
CCATCGATTTTTCAATTCGCCATCCTAAATGTGTCACAATGAATGTAGAG
ACAAAGTCCCATTACCATGCATACCCAGTAAGGACACGCCAGGGCGTAAA
CGAGAAGGCGCTATCGAAAGCTACATATCTGGATCAGGTTTACAAGTTCC
CAAGATTGTCACAACATGTATCGAGGAAGTAGAGAAACGAGGTCTGAGAG
AGCTTGGTATTTACCGCGTACCAGGAATGGACAGAGACGtgaaagaattg
aaagaaaagTTCCTTCGTGGACGAAACCCTGATCTTAACAAGATTAACGA
CATTCATGTGGTTTGTGGCTGCTTGAAAGATTTCTTACGAGGATTGAGTG
AACCTCTGGTCACATTCACCCTTCATGAATCGTTCATGGTTTCTGCAGCG
CTGACTGATGAAGATGACAGTTTGAGTGGAATGTATCAATGTGTTAGTGA
GCTCCCACAAGCCAACAGAGAAACGTTAGCAGCCATCGTCATCCATCTAC
AAAAAGTGGCCACTTCTACTGAAACACAAATGTCCGTCTCCAATCTCTCT
AAAGTGTTTGGACCAACCCTTATTGGACATCGTTCGTCCAACCCAACCCA
CATGGAAATGTTAGATGACACAAAAGCGCAACCTGTTGTTGTCACCCGTC
TGTTAGAGATGCCATCGGACTACTGGTCACAGTTGTTGAGCGGAGGACCA
CACGTTCGAACGCCTCCTTACAACCCTCACTATGCTTCAGCCACGCCCAC
TACTCCTGAATGCAAACCTGTTCCCACCTCCCGCTTGGGCGCTATCGATG
ACATGACTCCAAGTCGATCCGACCGaaagttcaacgccatgaaCCCAAGA
CACGCTTCGTCGAAAGATCCAAAGAGCCATCGATTTTTCAATTCGCCATC
CTAAATGTGTCACAATGAATGTAGAGACAAAGTCCCATTACCATGCATAC
CCAGTAAGGACACGCCAGGGCGTAAACGAGAAGGCGCTATCGAAAGCTAC
ATATCTGGATCAGGTTTACAAGTTCCCAAGATTGTCACAACATGTATCGA
GGAAGTAGAGAAACGAGGTCTGAGAGAGCTTGGTATTTACCGCGTACCAG
GAATGGACAGAGACGtgaaagaattgaaagaaaagTTCCTTCGTGGACGA
AACCCTGATCTTAACAAGATTAACGACATTCATGTGGTTTGTGGCTGCTT
GAAAGATTTCTTACGAGGATTGAGTGAACCTCTGGTCACATTCACCCTTC
ATGAATCGTTCATGGTTTCTGCAGCGCTGACTGATGAAGATGACAGTTTG
AGTGGAATGTATCAATGTGTTAGTGAGCTCCCACAAGCCAACAGAGAAAC
GTTAGCAGCCATCGTCATCCATCTACAAAAAGTGGCCACTTCTACTGAAA
CACAAATGTCCGTCTCCAATCTCTCTAAAGTGTTTGGACCAACCCTTATT
GGACATCGTTCGTCCAACCCAACCCACATGGAAATGTTAGATGACACAAA
AGCGCAACCTGTTGTTGTCACCCGTCTGTTAGAGATGCCATCGGACTACT
GGTCACAGTTGTTGAGCGGAGGACCACACGTTCGAACGCCTCCTTACAAC
CCTCACTATGCTTCAGCCACGCCCACTACTCCTGAATGCAAACCTGTTCC
CACCTCCCGCTTGGGCGCTATCGATGACATGACTCCAAGTCGATCCGACC
GaaagttcaacgccatgaaCCCAAGACACGCTTCGTCGAAAGATCCAAAG
AGCCATCGATTTTTCAATTCGCCATCCTAAATGTGTCACAATGAATGTAG
AGACAAAGTCCCATTACCATGCATACCCAGTAAGGACACGCCAGGGCGTA
AACGAGAAGGCGCTATCGAAAGCTACATATCTGGATCAGGTTTACAAGTT
CCCAAGATTGTCACAACATGTATCGAGGAAGTAGAGAAACGAGGTCTGAG
AGAGCTTGGTATTTACCGCGTACCAGGAATGGACAGAGACGtgaaagaat
tgaaagaaaagTTCCTTCGTGGACGAAACCCTGATCTTAACAAGATTAAC
GACATTCATGTGGTTTGTGGCTGCTTGAAAGATTTCTTACGAGGATTGAG
TGAACCTCTGGTCACATTCACCCTTCATGAATCGTTCATGGTTTCTGCAG
CGCTGACTGATGAAGATGACAGTTTGAGTGGAATGTATCAATGTGTTAGT
GAGCTCCCACAAGCCAACAGAGAAACGTTAGCAGCCATCGTCATCCATCT
ACAAAAAGTGGCCACTTCTACTGAAACACAAATGTCCGTCTCCAATCTCT
CTAAAGTGTTTGGACCAACCCTTATTGGACATCGTTCGTCCAACCCAACC
CACATGGAAATGTTAGATGACACAAAAGCGCAACCTGTTGTTGTCACCCG
TCTGTTAGAGATGCCATCGGACTACTGGTCACAGTTGTTGAGCGGAGGAC
CACACGTTCGAACGCCTCCTTACAACCCTCACTATGCTTCAGCCACGCCC
ACTACTCCTGAATGCAAACCTGTTCCCACCTCCCGCTTGGGCGCTATCGA
TGACATGACTCCAAGTCGATCCGACCGaaagttcaacgccatgaaCCCAA
GACACGCTTCGTCGAAAGATCCAAAGAGCCATCGATTTTTCAATTCGCCA
TCCTAAATGTGTCACAATGAATGTAGAGACAAAGTCCCATTACCATGCAT
ACCCAGTAAGGACACGCCAGGGCGTAAACGAGAAGGCGCTATCGAAAGCT
ACATATCTGGATCAGGTTTACAAGTTCCCAAGATTGTCACAACATGTATC
GAGGAAGTAGAGAAACGAGGTCTGAGAGAGCTTGGTATTTACCGCGTACC
AGGAATGGACAGAGACGtgaaagaattgaaagaaaagTTCCTTCGTGGAC
GAAACCCTGATCTTAACAAGATTAACGACATTCATGTGGTTTGTGGCTGC
TTGAAAGATTTCTTACGAGGATTGAGTGAACCTCTGGTCACATTCACCCT
TCATGAATCGTTCATGGTTTCTGCAGCGCTGACTGATGAAGATGACAGTT
TGAGTGGAATGTATCAATGTGTTAGTGAGCTCCCACAAGCCAACAGAGAA
ACGTTAGCAGCCATCGTCATCCATCTACAAAAAGTGGCCACTTCTACTGA
AACACAAATGTCCGTCTCCAATCTCTCTAAAGTGTTTGGACCAACCCTTA
TTGGACATCGTTCGTCCAACCCAACCCACATGGAAATGTTAGATGACACA
AAAGCGCAACCTGTTGTTGTCACCCGTCTGTTAGAGATGCCATCGGACTA
CTGGTCACAGTTGTTGAGCGGAGGACCACACGTTCGAACGCCTCCTTACA
ACCCTCACTATGCTTCAGCCACGCCCACTACTCCTGAATGCAAACCTGTT
CCCACCTCCCGCTTGGGCGCTATCGATGACATGACTCCAAGTCGATCCGA
CCGaaagttcaacgccatgaaCCCAAGACACGCTTCGTCGAAAGATCCAA
AGAGCCATCGATTTTTCAATTCGCCATCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089_pilon | genome | sc0000089_pilon:431929..436640 + |
|
