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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000089_pilon:334315..341647+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12012.1.p1 ID=MSTRG.12012.1.p1|Name=MSTRG.12012.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7333bp|location=Sequence derived from alignment at sc0000089_pilon:334315..341647+ (Clytia hemisphaerica_ch_hm2_pilon)
TCCTGTATTTTTAGTAAGCTTCACAGGGGAATAATATAATTACTTCTcac
aaacattttttatctcttAGTTACAGAAAAgtttcaaattaatttatttt
cgttGATCGGGATGAAGGgagtattgaaaatattttgaggagAATATCAG
TAGCACATATAGAGAGCGTAGAGATAATCTCATTAAAGGTATTATCTGAC
GGTGACAATTTTATGGAATAGAAAGCTTTACGACTGGgaaaactatcaat
tttttCGCAACTGATTACCCAAAGACTGCGAGCTACACCAGAGAAACCTT
CTGATGGAGaagttataataaaactgttgTTTGTATGGAAGTCACTGAAA
AGTGATCTTCACATAGTTTTTGATACAAATGATTTTTGATTAAGCAAACA
TCTTAAAATTGGGAAGACGCGTGGttggaaatttaaaaagatgAGTGCTT
TGGTTGTGGCAGTACAAGCGGAACGCATTCATCAAGTGAAGCTTCTGTTA
GCCAACCCTGGCGTGGATATCAATTACCGGGACACAAAAGGACAGACAGC
TCTCTTCAAAACTTGCTTTATGAGAAAGAAATGGAAAAGTATATTAGTGG
CCAACCTTCTTATACAGAATAGAATCAACATCAACGCAGTGGACCGTTCA
CACCGCACATGTCTGTCGTATGCTTGCATGGTAGGCAAAGAATATCTAGT
GAAGATATTTTTAGAGACGGGAGATATGGCCCCAAACACACGTGATGAAA
ATGGTTTCACCAATCTGATGCATGCTGTGCAGTCCGCCAATATCTCTGTT
GTCTCCATGCtgcttttgtttttgaataaatatggACTCTCATTGGATGA
GCGAACGACCAATGGATTTACAGCTTACATGCTAGCTTTAAAGGACGGAC
ATGTCGCGATTGCCGACCTTCTAAGGGAAAAAGGAGCTTCTACTCAGACT
TTCGATTTCGAGAACTTTCGCAGCAGTGAGGACTGGAGGAAGTTTTCGGC
GGGTGACCATCGGAGAGCCAGCACAGCACCAGGTGTGTTAACGCAGCACA
TTGAAACTCTGGAATGGGCCAAATGTTCACCTCACTTACAAACTTTATTT
ATGTTGAGAGAACATTCGAAACAAGAACCATTAGAGTTTTATCATACAAC
TCAAATCAGATCAACTGGTCTTAGTGAAGCCAAAACAATCTTGCGTGGCT
CACAAACGGCTAAAGAGAGATCTTCAACGCAAAAGCTACCAAACATCAAC
AAGGGAGAACCAACAGCAAGAAACGTCAGCCAACATCAACGTAATTCGAT
CAACTCAGCCCCACCCAATTTATCACATCATCGTTCACAATTTTGCACTA
AAAACATTTTAGGTATGCTTCTCAATGAAAGTGTTTTGACCAAAACACAA
ATCGAAGAAGACCAAGAGAGATTAGAACGAGCGAAGAACGCTAAAATTGT
GCGCAAGGTGAGAAAGGACACACTGCTACCAAACATCGACATCAGTGGAC
CAACAGATGACCCGCTCAACATACGGAGATGCTATTCGACGGACCCCACA
AATATCCGGAAACGGTCGTTGAGTTCCGCACATTCTTACACTTCCAGAAG
AATTAGTATGATTAGTTGAGAGACCTTCAACGGGAACGTCTTTGTATCTC
ATGTAGAATTTATTTCGTGctaaatttattgtttttttgtcaaaaagatc
TAGAGGTAAAATACTGAAATGAAGTTTTTATTAAGATTCTCTATCGAGGG
ATGAATAGCTAGGAGAATACAAAAGGGCCCCAGCATTTTGTAAGAATGgg
atttttcacttgcgtgaatgcgtagtaattttagaaaaactacatgaatg
cgtgaatctcgAAAAAAGTTTGCGTGAGTGCGTGAATCCGAGAAAAATGC
GTGATTACGTGAATTGAAGGTCGGCTAAAAGGTCTCATATAATATCTAGT
ATCTTCGAAATTCGGAGGTACCCAAAAGTAAAAATGCTACCAGTTCTATG
TATGGAATTCAGAAGCGGTGATGTATAACGATCTTTTTCGAGTGTTTCCG
TACGatagattacatcatgaatatcaaatATCGAGACCAAGGAGTTGGAA
AATAAAGGGATGAATAACAGCATTCAAATAAATGAATCATAGAGGGGATT
GAAAGAGGCGACAAGATTTTAGAGGGgaacagaaaatgaaaaatgaaact
taattTGTCTTCAGTAAAAGAAGGATCTTACTTGAAAAACCTGTTTACTG
TTGCTTTGTTTTATAAACAAGATATGAAGGGTCTTGAGGCTAAATGGAAA
AAGGGGGgacaaaacaaagaaacagtCTTCTCTTAGAAACCATCAAACGG
TATGAATTATTCAGGACCAAATTTCAATTCCAGAtctttgaatgataaat
ttgtGAATAAttgaaacaaaagttttatgaGAGGAATACAAAAATACAAC
TTCATCATTATaaaatagaagaggaagaagaagaagaaaagaaagggaag
agaaaattacttaaacaaaaaaaaccgaaaaTAATATTTAGAAGGAATAT
TTTGATTACAGCTTTCAGATGAAGCATATATCGAAGAGCGGGATGTTTGC
TGTCTTTCTGCGGGTTTTCACTGGTCTCTGTTTACTAGCCAGCCTTTTTC
TTGGAGTAATATCCGTAGCTAGTCATCGCTGGATCGAAAGATATGCCAAG
AATGGAACACAGTTTTACCATATGGGattatggaaattttgtgatatGAA
GCAATGTCATGTTTCAATTGAAACTGGCTTCATCTTGAACAACAACTTAG
GAAGTATGAACATTTTTAGATTTGTGGAAGGGTTTAGAAGAGCCACCCCG
CGGCGGTTTgcatgatggcgtgattggggctttttttttGAGTGATAGCG
CATTTAAGATTTTTGCGTGTTACGTGATAGGGACGATTGAGACTCGATGC
GTGATTTGAAGACAAATTCGGCAATTTTCGTGATCGCGAGGAGAGCAAAA
TAGCAAGTGAAGGAGAAATAAATCGCGAAAAACCAGGCCTATTTTTTATT
AGTAGACTCAGTCAAGCCCTCTTTTTTCGGGCTAAACGCAAAATTTTATT
AATGaagtatttttactttttagataTGTTGAAGTACGTTCGAATTTTGT
TCTGCGTTGGTGTTTTCGCGAATTTGGTAGCTTTAAGTTATTTCATGTTC
GATTGTTTGATTCTGATGAAGAAAGGACACCTTATGGTTATCAACATGTG
CATCATACTTTCCGGTACGTTCTTCCCTGGTgcatttcttaagaaaaaag
atttaagtCCCCTTGATACACGTTTTAAGAAAACTAAGtgaattgaaaat
gttgaaaaaatgaaagtctTTGATATGCCCAAATTTGATCAGCTTTTATA
AAAGGGCGTGTAAAACCATTGTTCTCACGTTTGCTCGTATCTCCTCACAT
TTGCTGAGACAGCAATTTCTCATTTCCCACGCCATGCTGCGCGAACACAA
AATTCGGAAAAACCTtatgtttattttgctttgtcagCAAAAGAGGTGCG
CcataaaattagcaaaatcttttattttactTTGAATGTTCGTGGGTTTT
CTGGAAGATGTGGTTTTGCCACACCCTCCAGAAATCTTTGTCCTCAAGGA
TATTTTGGGAGCGTCTCCAGGGGAAAACTCGTCTAAATACTGAGATTTTA
CTTAACTATTAAAGAGGTTTTAATTCATACCCTGCAGGAGTGAGAAGACG
TATTGGATAATAGGGAAAAGTAAACTTCCTTATTGATATCTGTCTACCCC
CTGAAGTCTTACTTACATTGTTTGAGCACCCTGGATAACATGATGGGTTG
CCGgtgtgtttttcctttttcctaaTTTCCGAATATTTTCTCGTAAAGCA
GCGTGCGTACTTTGTAACAGGGCTTAACAGGGTAAACCTTTTTTGATAAT
TCCGTAATTCATATTTTATAGAAGAAAGATACATTTCGGATGAGTTCAAA
CATTCGATCAAATAATAAAAACGGAAGCATAGTacacttcaaaataaaaa
gagatTTAGGAGGTGGTCTAGGCTGCGCACATCCCGGAATATAGCTTTGT
CCATAGATGCAATCCCAAATACAAATATTCCGAGTCCGATGTTCTTTCTC
TAAAGTTAAACAAGTTAAATGAATCTTTGATTTCCTTTAGGCGTATTGAA
AGGTGTTGGGATGATTTTGTTCACGGAACATTTCAAAGTGAACAACTTCC
AATGGGGATGGAGTCACACTGTCGGGTTGAGTTCAGCCATACTCCTGGCG
GTGGCATTATTGACAAGTTTTTATTACATGCGAAAGTATGGATGGACGGA
AGAAGACCGAAGGAAAAAGCAGAAAAGTTCATCCTACAAATTTGACAAAG
TCGACTTTGATGGATATGACTAATGAAACGAGAGACaagatgaaaaaaga
tttgGGGTTACAAAAGCAAATGAACAGGCACAGTTTTCCCTTGGAAGGCA
ACGGGtcatttctcgagatttctaGTTTCATTATTTtcgttttgacgtca
aaaattcgaaagaagacgttacaatggcggaatttctaaaaataacgtCA
ATAAAAATCGCTtgtcaaaaatgaaaacgaaataGTCTATCAAGAAGTCT
AGAGTGAATGAAGAAGACAATTTCTGAATGATTCAAAACgataagaagaa
aatcaactcaAATACCTTATGCAGCTTGACAAGTTTGTGAACGTGATGGG
TATTAACGTAATACAAGTTATCGATCAGATACAAAGTGATAAAAATGGAG
GAGACAAGAAGTTCATCGACTCTGAACGACTAATCGACAAAAACTGGTTC
aagaaattagagagaagaagattgaaagagaaacttgctgccgagaaaga
agaaaTTATTATACTGTCCGATCAGAAACTTTCCATCAGAAAGAATGAGA
CAAATCACACATACAGGGTGTCCTCTTCACTTAGCAAACGCCGAGAAGAA
GATATTATTCCGACAAACTTAATTTttccaatgaaaatgaaagtagcTGA
ATTTCCGAGCATCGAGACAAAGGAACAAGGAACTGAGAAAGATAAATCTA
TACAAAGTCTACGTAGTCGTGTCTGGCAACGGCCGAGGACTATGAAATGG
TGTAagccaaaagattttttatccAATAAAGTGAAAACATACTCAGAAGC
TTGCGAACTAgtcaaacaaaatgaaaacgGTGTTATTGTGAGAGTGAAAA
GGACTTCTCCTGGAGAGCATGATGAATTTTTCAACCTTGATTCTGGCGAT
AATTCAGTCGACTTTATTACTTTCATACCTACTTAAATCTGATTTATGTA
ACTACTGTAgctatataaatatttttaaaacaataaaaaaagttttaaaa
ttggccCCATTTCCTCTGGGAATTTCTGACGAGTAAAGGCAGCAATCATA
CAACATGATAATACAAGCAACGATATGATTATCGATCACTGATCAAAATG
ATTATTGTTAAACACTTAGTATGTTTTGGGTGGTTGATGAACCTGAAAGA
ACTTAAGTAACTCTTATCGTAGATTAATTTTCAAATGTGTTTGATGAATT
TCTTGAGGAAGACTAATCTGTGAAAGATTACCCCGTTAAAGGTTCATTAC
TTTACCTACGTAAAATGAATACTTTTCAGGGAAACCTTTTCGCCTCTTTT
TGGAGAATTAGTGATATGAGAGAAGCGTTTGAAAATGAGAACATaaactg
aaaaatgaaagagGTAAGATTCTTTCACCAAAAATCTTATTTGCAATTAA
AATCTAATCGcgagaaaattttaaatactgtaattaaaaaaaatcgattt
aAAAAATGTTAGGAATTATAAAAATTCTCTAGCAGACTTACCAACCACCC
ATGGTattcattcactcactcattcattcattcattcaataataattcta
aatcttcaagttcatCTTGAAATTGTTCTCGTTTActtaatttttcaagt
tgttcTTTTTCAAGAGTCTCTCCTTTATCCTGTCTCTCTTTGATTTGATC
ACATTGTTTTAGCTTCTTTCGTAAACCTTTGATTTTCTTCTGAATCTCTG
CATTCTTTTCAtcatcatttccaccaaaacttttattgccATCGTTCTTA
TTCAAATCAACTTTAGCCATCTCCTTTGTTGCCATGGCTACCGAAGGTAC
TGTTGATTCTTCCTCGgttttttctttccgtttttgtttccttcgttcat
ttttcttggcgtttttACTCATGGGTTTATTGACAACAGTTTGCGGTTGG
GTGGGTAGCCCAGGTGTGAACGCCGCTTGGTTAGCTTGGAATCTTTTCCC
TTTACTTTCGTACTTTTCAGCTTCGTCAGGAGGGACGTACCCCGCCTTCA
CTTTGCGCTCTTTACGCCATGTTCCGTCAGGTCGGCGACTTGCCGGTATA
ACGGTATCACCACCTGACGCCATTAAaagatttgatatttttttgctttt
tttcactGAAACAAGAACAAAGAATTTGTAATTTGTGATATTACCACATT
TTACCCGTTACCTTTCTAATTCAAATGCTTAACTCGATAACACAATGGCA
AAGATATCGATTTACAtatatttcagaaattttatttacaaatttacatA
TATAACATACAACGATTACATAGATTTCGGGACGAGTGACTGGAGATTTC
TGAGTTTATGATcctgaaatgaaaagaaaaaaaaattgaaagtcaaaaac
atttcaagcGAAATTTAAGGTTGCAACGAGCAGCAACGTGATTAACAAAT
AAAGAAACCACTTACTTCGTTGACAGTACCTCTATTAATTACTCAAAGGA
ACCAAGTCCAGAATCTGTTTCCAATCTTAACAGACGAAACCCAGGTTGCA
ATGGAGTGTATGTGGTACTATCATCTCCCATTGTTCTTACACAAGATCGC
CTCGAAGGATTTTTCCAAGAAATCTTTGTACATTGTCAACCATAGTTTCA
GGCGGTTCACAATCGACGCCATTTCCGTCTCCTAAAAGGAGAAATCCATT
TTTAGTTCTGAGGTTCACAGCCTTGACAATCATGATATCTTTTGATGGCA
CAGATCTTGTGCGAAAATTCCTTATCGACAGAATGTAATGTGAATACAGT
TgatactctctaattcgacgttaaACTTAttgaatactttaggcgtacaa
actttcgcgagcagaaactttcgcgtggacgaaaaatcgcgaaattcatg
ACATTTACTtccgcgaatttaacggaaagatatttttcgcaagcataaac
tttctcgaatcaagacgtaaaattgagaatttt Coding sequence (CDS) from alignment at sc0000089_pilon:334315..341647+ >MSTRG.12012.1.p1 ID=MSTRG.12012.1.p1|Name=MSTRG.12012.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1179bp|location=Sequence derived from alignment at sc0000089_pilon:334315..341647+ (Clytia hemisphaerica_ch_hm2_pilon)
atgAGTGCTTTGGTTGTGGCAGTACAAGCGGAACGCATTCATCAAGTGAA
GCTTCTGTTAGCCAACCCTGGCGTGGATATCAATTACCGGGACACAAAAG
GACAGACAGCTCTCTTCAAAACTTGCTTTATGAGAAAGAAATGGAAAAGT
ATATTAGTGGCCAACCTTCTTATACAGAATAGAATCAACATCAACGCAGT
GGACCGTTCACACCGCACATGTCTGTCGTATGCTTGCATGGTAGGCAAAG
AATATCTAGTGAAGATATTTTTAGAGACGGGAGATATGGCCCCAAACACA
CGTGATGAAAATGGTTTCACCAATCTGATGCATGCTGTGCAGTCCGCCAA
TATCTCTGTTGTCTCCATGCtgcttttgtttttgaataaatatggACTCT
CATTGGATGAGCGAACGACCAATGGATTTACAGCTTACATGCTAGCTTTA
AAGGACGGACATGTCGCGATTGCCGACCTTCTAAGGGAAAAAGGAGCTTC
TACTCAGACTTTCGATTTCGAGAACTTTCGCAGCAGTGAGGACTGGAGGA
AGTTTTCGGCGGGTGACCATCGGAGAGCCAGCACAGCACCAGGTGTGTTA
ACGCAGCACATTGAAACTCTGGAATGGGCCAAATGTTCACCTCACTTACA
AACTTTATTTATGTTGAGAGAACATTCGAAACAAGAACCATTAGAGTTTT
ATCATACAACTCAAATCAGATCAACTGGTCTTAGTGAAGCCAAAACAATC
TTGCGTGGCTCACAAACGGCTAAAGAGAGATCTTCAACGCAAAAGCTACC
AAACATCAACAAGGGAGAACCAACAGCAAGAAACGTCAGCCAACATCAAC
GTAATTCGATCAACTCAGCCCCACCCAATTTATCACATCATCGTTCACAA
TTTTGCACTAAAAACATTTTAGGTATGCTTCTCAATGAAAGTGTTTTGAC
CAAAACACAAATCGAAGAAGACCAAGAGAGATTAGAACGAGCGAAGAACG
CTAAAATTGTGCGCAAGGTGAGAAAGGACACACTGCTACCAAACATCGAC
ATCAGTGGACCAACAGATGACCCGCTCAACATACGGAGATGCTATTCGAC
GGACCCCACAAATATCCGGAAACGGTCGTTGAGTTCCGCACATTCTTACA
CTTCCAGAAGAATTAGTATGATTAGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000089_pilon | genome | sc0000089_pilon:334315..341647 + |
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