MSTRG.12010.3.p1 (mRNA) -

Overview
NameMSTRG.12010.3.p1
Unique NameMSTRG.12010.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000089_pilon:302800..304266+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12010.3.p1 ID=MSTRG.12010.3.p1|Name=MSTRG.12010.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1467bp|location=Sequence derived from alignment at sc0000089_pilon:302800..304266+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTAAAGACCCTCTTCATAACAAACTGACAAGGTgaaagcaaaaaaactt ttgattccCTAAATCTTTATCCAATATTAAGGAGGCCTCCCagtggacct tcaattcacacAATCACGCAAAATTTGTTCCCTAATtctcacgcattcac gcaatgttttttcacaattcacgcaatgtttttcacgcaaagctttccaa ttcacgtTCATTCACGcagttttttttctacttttcacgtattcacgcaa gtgaaaaagcccattcacgcattcacgcaaaccgctgggtgGGGCATTAA GTACAATGTTTATCGTTCGATAATTTTGACTCTTGTTTAAGAAATCATGT ATCGTAGGAGTTAAGTAAGCGCTGGAAGAAAAATTGTCGGCGGGAGGGGC TTAAAGCACCTTCTCATCAaattttgctcgttctcctacgcaccTCCTAT TTTAGAAAACATTCAACCGCTCTTATCTCCCCCTCTTAAATTATCAATTT ATAGACTAGCTTGTTTGTGACTAGTCAAGTGAGGCTTTAGGTTAAGGCTG TTGATAACAATTTAAAACTTATTCAAGCATTACTCTAATCTAAGTTTCGg attctttttctttagatGTTCACTTCTACCCTCACTGAGTATTCTTATCA TTGTATCAGCTCTCTTGGTGAGTCCATGGACGGTCACTTTAAAAATCGTT GAAAACAAAGCTAATGGAATAGAGACTTGTAATTCTTCATCAATGGAAGG TCTGTGGATGGGAAGGGTTTTGAATTTCATATTTGAATGTTTGAACCTGA CACGTGGTGTAGTAGCAGCAGTAACCATAATCGTGCTCagccaaatgacg tcacaagcatTGGAAAAGAATaacgatttttataagaacaacccaGTCTT ACGTTTACGCGTACAACACGTACGTCGCTTGTTACGTACTATCACAATAG CGTTCAGTATCTTAGTCATCCCCGCGGATGCGTTTCACGTGATCTACCAC ACAATGACGTGGACGATGAAGCTCACACCAGAAACGTTCGCCGTACTCCT CAATATTCACGTTCTGCTTAAACTTCTCCAATCTTCAAACAGCGCTTTTA ATTTTATCATTTACGCCGGAATGAAAGGCGACGTCAACAACTTCTTACGT AAACTCAGCCGGCGTGTCGTGAGTAGATCCAGATTCGTGGTAAACGTAAC GGAGAAAAAGGGAGAGGAAAGAATACCGAGAAAACTAACCACTCTTTCGA CTATATCTTCAACTGGGTGTTGAACGCTCTAAATCCAAACTCAAACCCAG ACCCTTAACTCGCTTTTTTATAATGAAGATTTATTGGATCAAGAAAATAT AACAGTGAAATACTGCATTGTACCAAAAGTTACAGTGACTATTCCACTCA AAAATAGCTTGCATTGGTGAAGTGAAAAATTAACTAACGAAATTAAGAGA GAATTATTTGTGCAATG

Coding sequence (CDS) from alignment at sc0000089_pilon:302800..304266+

>MSTRG.12010.3.p1 ID=MSTRG.12010.3.p1|Name=MSTRG.12010.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1380bp|location=Sequence derived from alignment at sc0000089_pilon:302800..304266+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTAAAGACCCTCTTCATAACAAACTGACAAGatGTTCACTTCTACCCTC
ACTGAGTATTCTTATCATTGTATCAGCTCTCTTGGTGAGTCCATGGACGG
TCACTTTAAAAATCGTTGAAAACAAAGCTAATGGAATAGAGACTTGTAAT
TCTTCATCAATGGAAGGTCTGTGGATGGGAAGGGTTTTGAATTTCATATT
TGAATGTTTGAACCTGACACGTGGTGTAGTAGCAGCAGTAACCATAATCG
TGCTCagccaaatgacgtcacaagcatTGGAAAAGAATaacgatttttat
aagaacaacccaGTCTTACGTTTACGCGTACAACACGTACGTCGCTTGTT
ACGTACTATCACAATAGCGTTCAGTATCTTAGTCATCCCCGCGGATGCGT
TTCACGTGATCTACCACACAATGACGTGGACGATGAAGCTCACACCAGAA
ACGTTCGCCGTACTCCTCAATATTCACGTTCTGCTTAAACTTCTCCAATC
TTCAAACAGCGCTTTTAATTTTATCATTTACGCCGGAATGAAAGGCGACG
TCAACAACTTCTTACGTAAACTCAGCCGGCGTGTCGTGAGTAGATCCAGA
TTCGTGGTAAACGTAACGGAGAAAAAGGGAGAGGAAAGAATACCGAGAAA
ACTAACCACTCTTTCGACTATATCTTCAACTGGGTGTTGAGTTAAAGACC
CTCTTCATAACAAACTGACAAGatGTTCACTTCTACCCTCACTGAGTATT
CTTATCATTGTATCAGCTCTCTTGGTGAGTCCATGGACGGTCACTTTAAA
AATCGTTGAAAACAAAGCTAATGGAATAGAGACTTGTAATTCTTCATCAA
TGGAAGGTCTGTGGATGGGAAGGGTTTTGAATTTCATATTTGAATGTTTG
AACCTGACACGTGGTGTAGTAGCAGCAGTAACCATAATCGTGCTCagcca
aatgacgtcacaagcatTGGAAAAGAATaacgatttttataagaacaacc
caGTCTTACGTTTACGCGTACAACACGTACGTCGCTTGTTACGTACTATC
ACAATAGCGTTCAGTATCTTAGTCATCCCCGCGGATGCGTTTCACGTGAT
CTACCACACAATGACGTGGACGATGAAGCTCACACCAGAAACGTTCGCCG
TACTCCTCAATATTCACGTTCTGCTTAAACTTCTCCAATCTTCAAACAGC
GCTTTTAATTTTATCATTTACGCCGGAATGAAAGGCGACGTCAACAACTT
CTTACGTAAACTCAGCCGGCGTGTCGTGAGTAGATCCAGATTCGTGGTAA
ACGTAACGGAGAAAAAGGGAGAGGAAAGAATACCGAGAAAACTAACCACT
CTTTCGACTATATCTTCAACTGGGTGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12010MSTRG.12010Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12010.3.p1.exon1MSTRG.12010.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12010.3.p1.exon2MSTRG.12010.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12010.3.p1MSTRG.12010.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000089_pilongenomesc0000089_pilon:302800..304266 +