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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:149844..154402+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12.1.p2 ID=MSTRG.12.1.p2|Name=MSTRG.12.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4559bp|location=Sequence derived from alignment at sc0000001_pilon:149844..154402+ (Clytia hemisphaerica_ch_hm2_pilon)
aatagtcgcgtcttctctaaggaatacatggtttctcattgtcagagaaa
tgctcatgacaaattttgactttggatCAATTTTGGTTTAGGATATATTT
GTTGAGCTATATGACGCTCGCCTCGCtactttgtttatatttaaagccgc
catatttgtttacttcggaacattacgtcattttgtTAGAACTTAGTCTT
TTTACACCACGTTTTCTTTATCTAATATGGTAGACGTTTTTTATGCTAGT
TACTGAAGAATTCTTAGAACTGAAGTTCGCTTCTACGTATTCACTTTTAC
TGTGTTTCCTGGAATTCCTTCATCATGAGTATACAAGATTCAACAGGTTA
TGGGCCCAGTACCCAATGGAAAAATCTTACATTCGATGGAGATGAGAGAA
AGTTTGAAATCTGGGAAACTAAGATTTTAGGCTACATGAAGTTAAGGAAA
CTCAAAGACATTCTTGTTGGGGAAAATGATGATGTTAATGCCGACAAGAA
CGAGACAGCATTTTCAGAACTTATCCAATTTTTGGATGACCGATCTCTCT
CCCTAGTCATCAGGGAAGCAAAAGATAATGGTCGAAAGGCGTTCAAGATT
CTTCGAGAATTTTATGCTGGTGATAGCAAGCCAAGAGTTATTACATTGTA
CAACCAATTAACAACGTTACAAAAAGGAACTACCGAGAACATAACAGATT
ACCTTATGAGAGCAGAAAAAGCGGCCATGTCATTGCGGTCTGCTAATGAA
CAGATAAGTGATGCTTTGTTAATTGCTATGGTCTTGAAAGGTTTATCTGA
CgaatacaaaccttttgtcGCCATTATCACCCAGTCAGAAAAAGTTGATA
CGTTTCTCAAGTTCAAGCAAACCCTCAGAAATTTTGAGGAAATAGAGTTA
ATTCGTTCATCGACCGAAAAGAGTACCAAAGAATCTGTATTGAAAACGAG
AGACTCAAAAACGTTCACTTGTTACAATTGCGGTATTGCGGGACATAGAG
CGTTTGAATGTCGTAAACCGAAAAAGAAATGGTGTAGTACCTGCAGATCA
TCATCCCATACCAACCAGTCGTGTagaaagaaacaacaaaatgaaaccAA
ACCAACAACTGACCACTCCAAAACTGCAGCCTCCGTACCCAGCAATGACG
GTAATGAACATtcgttttcattcatttttaaagCCAGCGATAACCGAAAC
ACGTATGCTAGTGGTGAGAACTTTTTAGTAGACTGTGGAGCCACTACCCA
TATAATTAACCATGATGATGGCTTCATTGAAGAGGACCCCACCTTCAACC
CAGCAAACCACCACATCGAACTTGCTGATGGAAGTCGAGTTAATAACATT
GCATTAAAGAGAGGAACTGTTATCGTGAAACTTGTGACGAAAGAAGGGGA
AACTGTCAATGTTCAACTGAGAGATGTACTTTACATACCTTCATTCCccc
aaaatatattttctgttaGAGCAGCAACCAAATTCGGAGCATCAGTGAGA
TTCTATGAACAGTATGCAGAACTCATTACTCCAGATGGTACCGTATTCCA
AATCAAAGAGAGGAATCGTCTCTATTACCTCTACAAATCTTACTCATCCC
AAAACCGACGAGAAAGCCTTGAAATGTGGCACAAAATTCTTGGACATTGT
AATACCCACGACATCGAAAAGTTAGAGAAAGTTGTGTCGGGTATGCATAT
CTGCAATCATGAGACTTTCGATTGTGAAATATGCGTCCTTGCCAAGCAAT
GTAACCAGAGAAACCGTGAACCTGATATTCGTGCAACCGAACCGTTTGAA
TTGGTCCACACAGACCTTGCTGGCCCCATCGAACCAGCAGCAAAGGACGG
TTATCGATACGCCATAATATTTACTGATGATTTTTCCGGTAACCTCTTTA
CATACTTCTTGAAAGCAAAGTCTGATGCACCAAAGGCAGTTAAGAAATTT
CTAGCTGACATTGCACCTTTCGGTAAGGTGAAAACTTTGAACTTTTTCGA
AGATGTATTTCCTGTAGGTGATGTCAAGAAAATGAGAAGTGATAACGGAG
GAGAGtatatttcaaaggaatttCGTGAAATTCTAGTTAACCACTCTATC
AAGCATGAGTTATCCGCACCGTACTCCCCACATCAAAACGGAACGGCTGA
ACGCAATTGGCGCACACTCTTTGAAATGGGAAGATCCATGCTTATCGAGT
CCAATCTACCCAAGTACCTCTGGACGTACGCCATAATGACAGCCACCCAC
ATTCGTAATCGTTGTTACGTCAAACGAATCCAAAATACCCCATTCGGTCT
TATCACTGGAACGAAGCCAAATCTTTCCAAGATGCACATCTTCGGTACCG
TGTGCTATGCATTTCTACAACCGGAACAGAAAAAGTTAGACCCTCGCTCG
AAAAAGGGTCACTTCATCGGGTATGACAAAGAAAGCCCGTCCTATCTGGT
ATATTTTCCAGATGACAGAACTGTGAAGAAGTACAGAGTGGTAAAATTCA
CAGATCAGTTCAGCACATCAGAACCACCAACCGTACCAAACCATTTGTTT
AACAACCCAGAACCGGAAGATCAGTCAACAACCAATACGGACAACCAAGA
AGCCCCAAAACGATACCCTACCCGTGAGAGAAAACAACCTGAGCGTTACG
GAGACTCTGTGAACTCTGAACATTTAGATCTCTATGATTGTATCAACCAT
GTCAATGGACCACCCACCTTCCATGAGGCTATCAACGGAAATCAGTCAAA
GCAATGGCAGTCGGCCATGGAAGCAGAAATCCAAACGTTAAAATCGAACG
AAACCTTCACCCTTACAGAGTTACCAGATGGCAAACAAACAGTTGGAGGT
AAATGGGTGTACGATCAAAGGGGACCCAGAAACCCCCATCTTCAAAGCTC
GCTACGTAGCAAAAGGCTATACCCAGAAAGAAGGTATTGATTATGCAGAG
ACATTCTCACCAACAGCAAGGATGGAATCTGTTAGAATCTTGACACAATT
AGCTATTCAGAATGATTGGATGATGCACCAGATGGATGTGAAAGGTGCCT
ATCTGCATGCACCAATCGAATGTGATGTTTATGTTGAACAACCTGAAGGC
TTCAAAGTAAATGGTGAGAAGCTAGTGTGGAAACTTAACAAATCGCTCTA
TGGATTGAAACAAAGTGGACGGAACTGGAACTGTCTTCTCCAAGAATTCC
TAAGTGAACTTAATTTCAAACAGTCATCTGCTGACCCatgtttattctac
aaaaccgaGAAATCCGAAACAGTCATTTTACTAGTATGGGTTGACGATAT
CATCATTGCCTCCAGTTCAGCAGTCTCAATGAAATCGATCAAATCGCAAC
TCAGCGCAAAGTTCATCATGAAGGACCTGGGTGAACTCTCATCTTTTGTT
GGTATCGATTTCGAAGTCAACCCAGATTCAATCACAATGTCACAATCAAG
ATACCTTACTAACATGCTCAAGAAGTTTAATTTCGAGAAATGTAAACCAA
GAAAAACTCCTTGTGAAACCAACCCGAATGCCTACAACGACAACCAAGGT
GAATCCAACGAGGAAGATACCAAACTATACCGTCAGATGGTAGGCAGCCT
TATTTATGCAATGACGTGCACCCGACCAGACCTCAGCTACTGCATAACCA
AGTTATCGCAACATCTTTCTAATCCAACTCCTGGTGATTGGATCATGCTC
AAACATGTATTTCGTTATGTCAAAGGAACTGTTGACTATAAACTGGAAAT
TCCACAAAAGCAAAAAGGGACTGAGATTAAATGCTTTAGTGATGCTGATT
GGGCTTCATCTACCGACGATCGTCGAAGTATCACAGGTTACTGTACAAAC
CTGAATGAACATGGCCCAATCATAAGCTGGAAATCAAAGAAACAACCATC
GGTGGCGCTATCCACATGTGAAGCCGAGTACATGGCAATGTCGATCACGT
GCCAAGAAACCATTTTCCTGACACAGATTCTACGCGAAATCTACGAACCA
AATTCTGCCATTATCAAAAGCGCAAACCAATCAGCTATCGACGAGATCAA
GAAATCGACAATTATTCAATGTGACAACCAAGGTGCTATCGCTCTCGTCA
AGAATCCTGTCAACCGACCAAAATCAAAGCACATAGATATTCGTTTTCAT
TTCATACGTGACTGTTATAATGACAATCGTATTGCAATCGATTATGTGCC
TTCCAATTCAAACGTAGCCGACGTTTTCACACCAACCAGCTCCAAAGAAG
CACCTATTGGAGTCTTTCAACCAACAACTTTTCGGACGTTAACGGACTTA
GCGTCAAGTGGGGGTGTTGAGCTATATGACGCTCGCCTCGCtactttgtt
tatatttaaagccgccatatttgtttacttcggaacattacgtcattttg
tTAGAACTTAGTCTTTTTACACCACGTTTTCTTTATCTAATATGGTAGAC
GTTTTTTATGCTAGTTACTGAAGAATTCTTAGAACTGAAGTTCGCTTCTA
CGTATTCACTTTTACTGTGTTTCCTGGAATTCCTTCATCATGAGTATACA
AGATTCAAC Coding sequence (CDS) from alignment at sc0000001_pilon:149844..154402+ >MSTRG.12.1.p2 ID=MSTRG.12.1.p2|Name=MSTRG.12.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1584bp|location=Sequence derived from alignment at sc0000001_pilon:149844..154402+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACAAACAGTTGGAGGTAAATGGGTGTACGATCAAAGGGGACCC
AGAAACCCCCATCTTCAAAGCTCGCTACGTAGCAAAAGGCTATACCCAGA
AAGAAGGTATTGATTATGCAGAGACATTCTCACCAACAGCAAGGATGGAA
TCTGTTAGAATCTTGACACAATTAGCTATTCAGAATGATTGGATGATGCA
CCAGATGGATGTGAAAGGTGCCTATCTGCATGCACCAATCGAATGTGATG
TTTATGTTGAACAACCTGAAGGCTTCAAAGTAAATGGTGAGAAGCTAGTG
TGGAAACTTAACAAATCGCTCTATGGATTGAAACAAAGTGGACGGAACTG
GAACTGTCTTCTCCAAGAATTCCTAAGTGAACTTAATTTCAAACAGTCAT
CTGCTGACCCatgtttattctacaaaaccgaGAAATCCGAAACAGTCATT
TTACTAGTATGGGTTGACGATATCATCATTGCCTCCAGTTCAGCAGTCTC
AATGAAATCGATCAAATCGCAACTCAGCGCAAAGTTCATCATGAAGGACC
TGGGTGAACTCTCATCTTTTGTTGGTATCGATTTCGAAGTCAACCCAGAT
TCAATCACAATGTCACAATCAAGATACCTTACTAACATGCTCAAGAAGTT
TAATTTCGAGAAATGTAAACCAAGAAAAACTCCTTGTGAAACCAACCCGA
ATGCCTACAACGACAACCAAGGTGAATCCAACGAGGAAGATACCAAACTA
TACCGTCAGATGGTAGGCAGCCTTATTTATGCAATGACGTGCACCCGACC
AGACCTCAGCTACTGCATAACCAAGTTATCGCAACATCTTTCTAATCCAA
CTCCTGGTGATTGGATCATGCTCAAACATGTATTTCGTTATGTCAAAGGA
ACTGTTGACTATAAACTGGAAATTCCACAAAAGCAAAAAGGGACTGAGAT
TAAATGCTTTAGTGATGCTGATTGGGCTTCATCTACCGACGATCGTCGAA
GTATCACAGGTTACTGTACAAACCTGAATGAACATGGCCCAATCATAAGC
TGGAAATCAAAGAAACAACCATCGGTGGCGCTATCCACATGTGAAGCCGA
GTACATGGCAATGTCGATCACGTGCCAAGAAACCATTTTCCTGACACAGA
TTCTACGCGAAATCTACGAACCAAATTCTGCCATTATCAAAAGCGCAAAC
CAATCAGCTATCGACGAGATCAAGAAATCGACAATTATTCAATGTGACAA
CCAAGGTGCTATCGCTCTCGTCAAGAATCCTGTCAACCGACCAAAATCAA
AGCACATAGATATTCGTTTTCATTTCATACGTGACTGTTATAATGACAAT
CGTATTGCAATCGATTATGTGCCTTCCAATTCAAACGTAGCCGACGTTTT
CACACCAACCAGCTCCAAAGAAGCACCTATTGGAGTCTTTCAACCAACAA
CTTTTCGGACGTTAACGGACTTAGCGTCAAGTGGGGGTGTTGAGCTATAT
GACGCTCGCCTCGCtactttgtttatatttaaagccgccatatttgttta
cttcggaacattacgtcattttgtTAGAACTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:149844..154402 + |
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