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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:1156662..1161439+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11986.1.p1 ID=MSTRG.11986.1.p1|Name=MSTRG.11986.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4778bp|location=Sequence derived from alignment at sc0000088_pilon:1156662..1161439+ (Clytia hemisphaerica_ch_hm2_pilon)
agcattACTGAAAACGCGGGCGAAATCAACGCAGAACGCGGGTGAAAAGA
GCAAAACGCGTTTGAATTTGAATTCCGTACGTTTTGGCGCCCATGACATG
ACATGAAGATTGGACTTTGATGCTGAACTCTACAAACAGAGAAGAAGGTG
TCAAAAAATGCAAGAATGAAGATCTTGGGTGGTGTTGCTGTTAAATACTT
CCAAAGATATTAACTGAAAGATCATGATGACCCTTGTTAAAATGAGATAA
GTAgatacattttttctcttttgaacTATAGATAAAAGCTTGAAAAAAGC
ATGCATCCTTTCCTGCAAATTGGCAAGGGTTAAAGTTATTTCAAACCCCC
TGTCTACATTTGGTATTTAAAAGCAGGGTAGCTACCCATGTGGTCCTCTT
TTATCCATTTTGTATTTCATCTTCAGTTAGAAAAGAGGTAAAATCTTCAC
tagagcctggagttccttatttttacagagaatttcaggatcaaagttcc
ttatcaagttccttatttacatagctgctaagtttggataaccatctctt
actgttccttaaaacttgttttcttattctcagcctgagcagttcctaaa
caattccttattttttggaccattttcagcctcgagttccttataaatgt
gttccttatataaaaaactctCTATCGTGGCCCTTTTTTCAGTGTGACTT
AACTTATCTTTTAACTTTGTGTCTTACTGTAAGGGcacaaaacatgaaat
tttccTATCTATGAGCTCAGGCGAATCCTTAACTTTATGCtagtgttttt
ttattctctggcttgtttttttttgcctaaggctgatggaaattaatgat
atgtttaccgtaatgacgattttcagaattcgatggggccaagttttcat
tattcattattcattattttctcataaacatttatttttaccagattttt
cgtttttccttaTAGATACACAATCTCCTCTTGTGTCTCCGGAACTCtcg
tgtttttattgatttttttggttCCCGTTTGTACGAGCTTTAAAAgagat
aaatctttttcttcctGCTAGAGAATTCTATAATGTTATCTCCAcaatat
gacaaaattaaattcacacgGTAAAGACTACTAGAGGGCCGTTCGGGTTG
TTAACAATCTAAAAAAGCcacgggccgtttgttttgatatcaacttcgaa
aatttttgttctctgcTCAAGTGGgaggaaaaataatgacaacttttcga
gaaaatggcaaataatgacaacttgatgcggcaggtttttgaacacgcgg
gcggcttacggtaaacataacattaaattccatcaGCCTAAAGCTTCTTC
TGCTAATTCTTTCTCATTCCTCTCCCCTGGTAAAAAATGCAATCAAGTGG
GTCTATTCTCTGGATGATAAGAAATTTCTGCGAgcaaagttttcaccaaa
atttcaaagagcAAGAGAGACCCAGTTGATTGAGAGAtcattttaaaata
tatatagaAGATGTGTTGCCAAAGAAGTGTTCTCCCCATTTcaacgttgT
ttttttttgctagGTTATTGAGATCATGGCAGCAAGACAAAGTCAAAGtg
caaagaaaacttcaagAGGTCTTCGATATAACACTCCCAGTAGTGCAAGT
CAACTCATAGTTAGTGCATCATCAAGAAGCAAACAAACTCCTAATTCAAG
GTTTGAATAATATAAAATTCAGAATAAATTGAATGGAAATAATTTCTCCC
TTCCTACAGTAGGACCAAATAAGATTCAGATTTCTTGATTAACATTCATG
GCGCTTTTCTGGGGTCATTCCGCTAGTTTTCCCAGGCAAACGGCTAATAT
CTGGCAAATCATAAAACGCAAAAAAGAAgttatgttttgattatttttat
aattggCCAACTTAGTTCACTAGTCAGAACTAACCCTCGTCTGTTTTCAA
GTGGCAAGTAAAATCTTAGTCGGGGAATCGAAATCATAGTCAGGGGATCG
GAATCATAGTTGGTCCTATGGAAATTGTAAACTTTCATATGCTTTACACA
AAACCCTCCTCCTGAAGTAgaaatactttctttttattctacaccataaa
tttgaatttaaaaggcTGATTATAAAGATTTACATCATAATTATTTATTT
AGCAGTCCAGCAAATCTGAACAATGCCAATAACATGAGTGGAATTTCTCC
ATTTCAAGATGATACTGAAATCACACAGAGGTAAGTAgacataaaaaaat
aattacaacaGTAAAATGTGTGCAAGAGTTTAAACACTTTTTCAATCATT
ATATACCAAACAGTCTAGTTCAATTTACTGTCTATGCTTTTAATTAAATT
ATTGGACTAAAGATGGTATTATGTTGTCTGTTAAAGCTctatttttaaat
tgattttcagAGATTTAGACCAACTGAAAGACGCTGTTAGGAAAGAGACA
AGGAATTTACATGATGCTCAAACCTCAAAAATGACATCTCTTGAGGAACA
AATTTCCACGTTGCAGGGAAAGATCAACATTCTGGAAGCTAGTGtaactt
caaagaaaaatgaaaaagaacctGTGCCTCCACTTTGTACTGTaagttaa
ttttcaaatttgtgaAAAGTATAACTACTCTCTAATAATCAGGGGGTCTG
GAATAAGAGGGTGGGCGGAGAAAATCTCGGgtgttggaataaaaatgtcc
tgggttgaaaagttttgaaaaggaggctaatacagaagAATAAGGGCAAA
GAAGAGGaactttcaaattattttcctaaaattaataaacaggaggggtt
ggaataagaatgtcctaggtggaaaatttttgaaaaattgattagcAGGG
GGGCGCTTATTAGATATCCAAGAGTAATTTATTGAGGTTAACCAGGGAGT
CCACTGAAGCTGTCGGGTCATAATAAGTAGTTTTCTTAAAGTAACTATGC
ACTCAGAACACATAACTGACACTCACTCCTGTATACTCTTCCACTTTTTC
AGAACCATTTCAAAAACAACTACAAAAAGTTAAACATTGACCAAGGTTGG
CGTTTTACGGAAACCTTCAAAAGTCAATACAATTTGGATGTGACAGCTGG
CATTGTAAAGAAAGTCAAGGACACTGGGCTAGGTTTCCAGGAAACTCAAA
TATTCAGTAAGTTCTAGTTCTATTCATTAACGTACATTATTATGATGTAA
TGAATGTAAGAATTTCTTAATTTTATTCTGCATAGCCATTCATTTTTATC
TTTCCTTTTTGACTGGTATTATTAACCTTTTCTGTACGGTAATTGATCAA
TTGTGATTTTAATTTCCCTGATATATACTCTATGGGTGAGGGTCAATGTA
AATAAAGCCAAAGTATGAAAGCTAGAATCAGTTGCAGGTTTTCCTTCATC
AAGTGAGCACACCAAAAGAAATTAGAAAGAGCAAGATGATCAGACAGACT
TAACCCAACACCAGATGCAAAGTCATATTGTTTAATAACCATCTTGTATA
AGCCAAAAAtctttcatctttgattttgaattcaCTTTTCATCAAGCGAA
CAATAACCAGATAATTGAATTATCAATTTCTTATTTAACAGGTGCAGCAA
AAGCGCACTACACAAACTTAAGGCGTTCAGCTTTGGAGAAGGATGATGCT
CCGGTTAAACGTAAAAGGAATTCCAGACGAGACAGAGTAAGtataatatt
tttgtaatcCATAATACCATTACATTAATACATTAATACATAAGGTGTGA
GCCCATACtcattatttttatataatgttTTTTCTGTTCAATTTCCAATC
ATGCTTGAAATAGGATACATCAATTTTTCAACTGATGATGGTCATCGGGT
GAAATATGTTTTAAATGttattcaaataaaatgaaattacttCTGTGCTT
AAACTTTATGATGAAATTATTCAGGAGGACCAATCAATTGAATAATGCat
caatctttttttattattattcagCTCCACAAAAAACGTACCAAAATATT
GAGCATATCCAACCCATCTGAGGAGGACAAAGAGCTGTGGTCGTTGACAT
CACCATACGTTATGTCAGATGAGGAGACAGATGATGACGGGACGAAGACG
TTCCGGCGACCGAAATGGCGgaatttaaatttgaacaatCTAATCGACAG
AATTGACGCCACAGGTTCATGCGTGAGGACCTACTCCAACACCCCTGCAA
CACGTATTGTGGATGCATCACAATTGGCtagagaagttctagatttagaa
ccagaagatttagaaccagaagatttagaaccagaacAAAGTGACGCTGA
ACCACCAAACGGTGACTCAGATGAGGCATCATAATTGGTAGTGAATCAAA
AGTGACTCTCTATCAATTATGGTGTCACATCTAAGTAACTGTTATTCACC
ACCAATTATGGTGTCTCATCTGAGTCACTGTTGGTTCAGAACCACTTTGT
GCTGGTTCTAAATTAGCCCCTTGTAATGTGTCGACAATACGTGTCGCAGG
GGTGTTGGATCCTCATGTATGGACCTAAAGTGTCAATTCTGTAATAAATA
TACACACAAAAGAGCTTTCCATAACACAAATTGAGAAGCTGCTCAGaagt
aatttaaatttttggtctcgaaattttgatattttcataattcattttta
catacatattttacatggttttattatacatatatattttataggcatat
ttaGACAGATTGTAACttcattttgatacattttcatttaaaataaaaaa
tttaaaaagcatTTCTGCTATTAAAATA Coding sequence (CDS) from alignment at sc0000088_pilon:1156662..1161439+ >MSTRG.11986.1.p1 ID=MSTRG.11986.1.p1|Name=MSTRG.11986.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5958bp|location=Sequence derived from alignment at sc0000088_pilon:1156662..1161439+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCAAGACAAAGTCAAAGtgcaaagaaaacttcaagAGGTCTTCG
ATATAACACTCCCAGTAGTGCAAGTCAACTCATAGTTAGTGCATCATCAA
GAAGCAAACAAACTCCTAATTCAAGCAGTCCAGCAAATCTGAACAATGCC
AATAACATGAGTGGAATTTCTCCATTTCAAGATGATACTGAAATCACACA
GAGAGATTTAGACCAACTGAAAGACGCTGTTAGGAAAGAGACAAGGAATT
TACATGATGCTCAAACCTCAAAAATGACATCTCTTGAGGAACAAATTTCC
ACGTTGCAGGGAAAGATCAACATTCTGGAAGCTAGTGtaacttcaaagaa
aaatgaaaaagaacctGTGCCTCCACTTTGTACTAACCATTTCAAAAACA
ACTACAAAAAGTTAAACATTGACCAAGGTTGGCGTTTTACGGAAACCTTC
AAAAGTCAATACAATTTGGATGTGACAGCTGGCATTGTAAAGAAAGTCAA
GGACACTGGGCTAGGTTTCCAGGAAACTCAAATATTCAGTGCAGCAAAAG
CGCACTACACAAACTTAAGGCGTTCAGCTTTGGAGAAGGATGATGCTCCG
GTTAAACGTAAAAGGAATTCCAGACGAGACAGACTCCACAAAAAACGTAC
CAAAATATTGAGCATATCCAACCCATCTGAGGAGGACAAAGAGCTGTGGT
CGTTGACATCACCATACGTTATGTCAGATGAGGAGACAGATGATGACGGG
ACGAAGACGTTCCGGCGACCGAAATGGCGgaatttaaatttgaacaatCT
AATCGACAGAATTGACGCCACAGGTTCATGCGTGAGGACCTACTCCAACA
CCCCTGCAACACGTATTGTGGATGCATCACAATTGGCtagagaagttcta
gatttagaaccagaagatttagaaccagaagatttagaaccagaacAAAG
TGACGCTGAACCACCAAACGGTGACTCAGATGAGGCATCATAAATGGCAG
CAAGACAAAGTCAAAGtgcaaagaaaacttcaagAGGTCTTCGATATAAC
ACTCCCAGTAGTGCAAGTCAACTCATAGTTAGTGCATCATCAAGAAGCAA
ACAAACTCCTAATTCAAGCAGTCCAGCAAATCTGAACAATGCCAATAACA
TGAGTGGAATTTCTCCATTTCAAGATGATACTGAAATCACACAGAGAGAT
TTAGACCAACTGAAAGACGCTGTTAGGAAAGAGACAAGGAATTTACATGA
TGCTCAAACCTCAAAAATGACATCTCTTGAGGAACAAATTTCCACGTTGC
AGGGAAAGATCAACATTCTGGAAGCTAGTGtaacttcaaagaaaaatgaa
aaagaacctGTGCCTCCACTTTGTACTAACCATTTCAAAAACAACTACAA
AAAGTTAAACATTGACCAAGGTTGGCGTTTTACGGAAACCTTCAAAAGTC
AATACAATTTGGATGTGACAGCTGGCATTGTAAAGAAAGTCAAGGACACT
GGGCTAGGTTTCCAGGAAACTCAAATATTCAGTGCAGCAAAAGCGCACTA
CACAAACTTAAGGCGTTCAGCTTTGGAGAAGGATGATGCTCCGGTTAAAC
GTAAAAGGAATTCCAGACGAGACAGACTCCACAAAAAACGTACCAAAATA
TTGAGCATATCCAACCCATCTGAGGAGGACAAAGAGCTGTGGTCGTTGAC
ATCACCATACGTTATGTCAGATGAGGAGACAGATGATGACGGGACGAAGA
CGTTCCGGCGACCGAAATGGCGgaatttaaatttgaacaatCTAATCGAC
AGAATTGACGCCACAGGTTCATGCGTGAGGACCTACTCCAACACCCCTGC
AACACGTATTGTGGATGCATCACAATTGGCtagagaagttctagatttag
aaccagaagatttagaaccagaagatttagaaccagaacAAAGTGACGCT
GAACCACCAAACGGTGACTCAGATGAGGCATCATAAATGGCAGCAAGACA
AAGTCAAAGtgcaaagaaaacttcaagAGGTCTTCGATATAACACTCCCA
GTAGTGCAAGTCAACTCATAGTTAGTGCATCATCAAGAAGCAAACAAACT
CCTAATTCAAGCAGTCCAGCAAATCTGAACAATGCCAATAACATGAGTGG
AATTTCTCCATTTCAAGATGATACTGAAATCACACAGAGAGATTTAGACC
AACTGAAAGACGCTGTTAGGAAAGAGACAAGGAATTTACATGATGCTCAA
ACCTCAAAAATGACATCTCTTGAGGAACAAATTTCCACGTTGCAGGGAAA
GATCAACATTCTGGAAGCTAGTGtaacttcaaagaaaaatgaaaaagaac
ctGTGCCTCCACTTTGTACTAACCATTTCAAAAACAACTACAAAAAGTTA
AACATTGACCAAGGTTGGCGTTTTACGGAAACCTTCAAAAGTCAATACAA
TTTGGATGTGACAGCTGGCATTGTAAAGAAAGTCAAGGACACTGGGCTAG
GTTTCCAGGAAACTCAAATATTCAGTGCAGCAAAAGCGCACTACACAAAC
TTAAGGCGTTCAGCTTTGGAGAAGGATGATGCTCCGGTTAAACGTAAAAG
GAATTCCAGACGAGACAGACTCCACAAAAAACGTACCAAAATATTGAGCA
TATCCAACCCATCTGAGGAGGACAAAGAGCTGTGGTCGTTGACATCACCA
TACGTTATGTCAGATGAGGAGACAGATGATGACGGGACGAAGACGTTCCG
GCGACCGAAATGGCGgaatttaaatttgaacaatCTAATCGACAGAATTG
ACGCCACAGGTTCATGCGTGAGGACCTACTCCAACACCCCTGCAACACGT
ATTGTGGATGCATCACAATTGGCtagagaagttctagatttagaaccaga
agatttagaaccagaagatttagaaccagaacAAAGTGACGCTGAACCAC
CAAACGGTGACTCAGATGAGGCATCATAAATGGCAGCAAGACAAAGTCAA
AGtgcaaagaaaacttcaagAGGTCTTCGATATAACACTCCCAGTAGTGC
AAGTCAACTCATAGTTAGTGCATCATCAAGAAGCAAACAAACTCCTAATT
CAAGCAGTCCAGCAAATCTGAACAATGCCAATAACATGAGTGGAATTTCT
CCATTTCAAGATGATACTGAAATCACACAGAGAGATTTAGACCAACTGAA
AGACGCTGTTAGGAAAGAGACAAGGAATTTACATGATGCTCAAACCTCAA
AAATGACATCTCTTGAGGAACAAATTTCCACGTTGCAGGGAAAGATCAAC
ATTCTGGAAGCTAGTGtaacttcaaagaaaaatgaaaaagaacctGTGCC
TCCACTTTGTACTAACCATTTCAAAAACAACTACAAAAAGTTAAACATTG
ACCAAGGTTGGCGTTTTACGGAAACCTTCAAAAGTCAATACAATTTGGAT
GTGACAGCTGGCATTGTAAAGAAAGTCAAGGACACTGGGCTAGGTTTCCA
GGAAACTCAAATATTCAGTGCAGCAAAAGCGCACTACACAAACTTAAGGC
GTTCAGCTTTGGAGAAGGATGATGCTCCGGTTAAACGTAAAAGGAATTCC
AGACGAGACAGACTCCACAAAAAACGTACCAAAATATTGAGCATATCCAA
CCCATCTGAGGAGGACAAAGAGCTGTGGTCGTTGACATCACCATACGTTA
TGTCAGATGAGGAGACAGATGATGACGGGACGAAGACGTTCCGGCGACCG
AAATGGCGgaatttaaatttgaacaatCTAATCGACAGAATTGACGCCAC
AGGTTCATGCGTGAGGACCTACTCCAACACCCCTGCAACACGTATTGTGG
ATGCATCACAATTGGCtagagaagttctagatttagaaccagaagattta
gaaccagaagatttagaaccagaacAAAGTGACGCTGAACCACCAAACGG
TGACTCAGATGAGGCATCATAAATGGCAGCAAGACAAAGTCAAAGtgcaa
agaaaacttcaagAGGTCTTCGATATAACACTCCCAGTAGTGCAAGTCAA
CTCATAGTTAGTGCATCATCAAGAAGCAAACAAACTCCTAATTCAAGCAG
TCCAGCAAATCTGAACAATGCCAATAACATGAGTGGAATTTCTCCATTTC
AAGATGATACTGAAATCACACAGAGAGATTTAGACCAACTGAAAGACGCT
GTTAGGAAAGAGACAAGGAATTTACATGATGCTCAAACCTCAAAAATGAC
ATCTCTTGAGGAACAAATTTCCACGTTGCAGGGAAAGATCAACATTCTGG
AAGCTAGTGtaacttcaaagaaaaatgaaaaagaacctGTGCCTCCACTT
TGTACTAACCATTTCAAAAACAACTACAAAAAGTTAAACATTGACCAAGG
TTGGCGTTTTACGGAAACCTTCAAAAGTCAATACAATTTGGATGTGACAG
CTGGCATTGTAAAGAAAGTCAAGGACACTGGGCTAGGTTTCCAGGAAACT
CAAATATTCAGTGCAGCAAAAGCGCACTACACAAACTTAAGGCGTTCAGC
TTTGGAGAAGGATGATGCTCCGGTTAAACGTAAAAGGAATTCCAGACGAG
ACAGACTCCACAAAAAACGTACCAAAATATTGAGCATATCCAACCCATCT
GAGGAGGACAAAGAGCTGTGGTCGTTGACATCACCATACGTTATGTCAGA
TGAGGAGACAGATGATGACGGGACGAAGACGTTCCGGCGACCGAAATGGC
GgaatttaaatttgaacaatCTAATCGACAGAATTGACGCCACAGGTTCA
TGCGTGAGGACCTACTCCAACACCCCTGCAACACGTATTGTGGATGCATC
ACAATTGGCtagagaagttctagatttagaaccagaagatttagaaccag
aagatttagaaccagaacAAAGTGACGCTGAACCACCAAACGGTGACTCA
GATGAGGCATCATAAATGGCAGCAAGACAAAGTCAAAGtgcaaagaaaac
ttcaagAGGTCTTCGATATAACACTCCCAGTAGTGCAAGTCAACTCATAG
TTAGTGCATCATCAAGAAGCAAACAAACTCCTAATTCAAGCAGTCCAGCA
AATCTGAACAATGCCAATAACATGAGTGGAATTTCTCCATTTCAAGATGA
TACTGAAATCACACAGAGAGATTTAGACCAACTGAAAGACGCTGTTAGGA
AAGAGACAAGGAATTTACATGATGCTCAAACCTCAAAAATGACATCTCTT
GAGGAACAAATTTCCACGTTGCAGGGAAAGATCAACATTCTGGAAGCTAG
TGtaacttcaaagaaaaatgaaaaagaacctGTGCCTCCACTTTGTACTA
ACCATTTCAAAAACAACTACAAAAAGTTAAACATTGACCAAGGTTGGCGT
TTTACGGAAACCTTCAAAAGTCAATACAATTTGGATGTGACAGCTGGCAT
TGTAAAGAAAGTCAAGGACACTGGGCTAGGTTTCCAGGAAACTCAAATAT
TCAGTGCAGCAAAAGCGCACTACACAAACTTAAGGCGTTCAGCTTTGGAG
AAGGATGATGCTCCGGTTAAACGTAAAAGGAATTCCAGACGAGACAGACT
CCACAAAAAACGTACCAAAATATTGAGCATATCCAACCCATCTGAGGAGG
ACAAAGAGCTGTGGTCGTTGACATCACCATACGTTATGTCAGATGAGGAG
ACAGATGATGACGGGACGAAGACGTTCCGGCGACCGAAATGGCGgaattt
aaatttgaacaatCTAATCGACAGAATTGACGCCACAGGTTCATGCGTGA
GGACCTACTCCAACACCCCTGCAACACGTATTGTGGATGCATCACAATTG
GCtagagaagttctagatttagaaccagaagatttagaaccagaagattt
agaaccagaacAAAGTGACGCTGAACCACCAAACGGTGACTCAGATGAGG
CATCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:1156662..1161439 + |
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