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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:916973..918884+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11973.1.p1 ID=MSTRG.11973.1.p1|Name=MSTRG.11973.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1912bp|location=Sequence derived from alignment at sc0000088_pilon:916973..918884+ (Clytia hemisphaerica_ch_hm2_pilon)
CGAACTAAAAGttgcaaaaatgatcaaatacaAAATTTGGTCTTTGAAAA
GTGGAGAACATTTATAGAGACAtttttttAAGGAAAGACAAGACATCAAT
AACAGTAGACAAGATGTTTCATGAAAAGCGAACATGACGataaaagttga
tattattttaagaagatacaaagaagaagaagatgaagacaacaaccaaa
caacaacaatcatcaataaacatgaagaagaTTTCACTACACTCAAAACA
CTCGGTTCAGGTGGTTTTGGGACTTGCTACAAAGCTATATACAAAAAGAC
ACAATTTGTATGCTGCATTAAGAAAATAAACCGTACTTCGAAGAAAAATG
CCGCCCTGCAAAGTTACAATGCTGAGACGAAGTCAGAATTCTTTGATTTT
GAGCATCAAAACATTGTCAAACTTATTGCAGCAACTTCAATagattttaa
cagttttgaCAAAGATTTAAGTAgtcttttaatggtttttgagTATGTTC
CGGGTCAAAATTTACATCAACTATTGGAAGACGAACAAGAAATTATTGAT
CTCCCGCGCATGTGCAGATTCGGACAGGACATTGCTTCAGCTTTAGATTA
CGTTCATCAGAAAGGGATCATCCATTTGGACGTCAAACCTTCCAATATAA
TGGTCACCTCTACAGATGTTTGTAAGCTTGCAGATTTTGGCTGCTCACAG
TACTTGGAAAGCGATCCAGTACAGTCAGAATCTTTGCTAACTGGAACGTT
CGCATATAGAGCACCGGAGCTGCATCGGGGTTTATCACCCACGCCAGAGT
GCGATGTTTACGCCGTAGGTAAGATATTTTCCGTTTCTTTCAGTCATAGA
CCTGGTAAATCTTGCATGAAATTCCAGTGTTATTTTCCATACGAGATGAT
TTTTGACCGATTTTTCCAAAGGTTGAAGAGCGGACTGGGTTAGTGCCACG
GGGATCTACAAAAGATCGAGGCAAAGTATAGCtgacaaaaaaggtttttc
ctgAAAGGACAGtctagatattcttaacttttggaGAAAATAATCACAAA
AAATTCTTGCGGACGGTATTCTTAAAGTTAGAATCCAAATTCAACCTGTA
ATACACACCTGAAGCataaatggcatttttgtgaaagtattaAGCTTTGC
TGGGTGATAACTGACAATTAACAATTAAGAAGTTCTTTcgaattccatga
tggtgttaTTTTTAGCgtattctaaatatttttagtcaatttcATTatca
atattcttataaagtatattcttaaaaaaaagtgtcTAGTTGTGATTGTT
GTTTTACatcttaaaaatcgaattttttctATCTTAGGAATTTGCTTGTG
GCAATTTTGGAGTCGAGAGATGCCATTTGGTGGAACCAACCAACATGTTG
TAATATATAATGtggttcaaaataatttacgaCCTGATTTTGAGCTTGAC
CATATCGACACCCCGAACGAGACTTATAAAGAACTTGCAACCCAATGCTG
GTCCAATGAACCATTTAATCGACCTACACTTTGTACTGTTATCGAGACTC
TAAGCTCATTATCGTCTTAATTATATCTTGTTTTGTTCTTACTTTGCTGT
TTGaaaattaattagtctaattatatattttattaagagatataaaatca
aagtataaaaattatatcttcattatatttgtattatagatttgttacat
attataaattttaaattattatttttcgtaatggtattacatagagattt
tatattatGCATTTTCAgaatattatttgaaaaattatctagatataaaa
aattatttgattttaacaGTTTTGTTTTCCCATACAGTGTTTcgtttttc
aagtaaaaatgtcAATATTTGGTTTTTATCTATGGGATCTATTTTTTCCA
CTGACTTTCCCC Coding sequence (CDS) from alignment at sc0000088_pilon:916973..918884+ >MSTRG.11973.1.p1 ID=MSTRG.11973.1.p1|Name=MSTRG.11973.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1836bp|location=Sequence derived from alignment at sc0000088_pilon:916973..918884+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGataaaagttgatattattttaagaagatacaaagaagaagaaga
tgaagacaacaaccaaacaacaacaatcatcaataaacatgaagaagaTT
TCACTACACTCAAAACACTCGGTTCAGGTGGTTTTGGGACTTGCTACAAA
GCTATATACAAAAAGACACAATTTGTATGCTGCATTAAGAAAATAAACCG
TACTTCGAAGAAAAATGCCGCCCTGCAAAGTTACAATGCTGAGACGAAGT
CAGAATTCTTTGATTTTGAGCATCAAAACATTGTCAAACTTATTGCAGCA
ACTTCAATagattttaacagttttgaCAAAGATTTAAGTAgtcttttaat
ggtttttgagTATGTTCCGGGTCAAAATTTACATCAACTATTGGAAGACG
AACAAGAAATTATTGATCTCCCGCGCATGTGCAGATTCGGACAGGACATT
GCTTCAGCTTTAGATTACGTTCATCAGAAAGGGATCATCCATTTGGACGT
CAAACCTTCCAATATAATGGTCACCTCTACAGATGTTTGTAAGCTTGCAG
ATTTTGGCTGCTCACAGTACTTGGAAAGCGATCCAGTACAGTCAGAATCT
TTGCTAACTGGAACGTTCGCATATAGAGCACCGGAGCTGCATCGGGGTTT
ATCACCCACGCCAGAGTGCGATGTTTACGCCGTAGGAATTTGCTTGTGGC
AATTTTGGAGTCGAGAGATGCCATTTGGTGGAACCAACCAACATGTTGTA
ATATATAATGtggttcaaaataatttacgaCCTGATTTTGAGCTTGACCA
TATCGACACCCCGAACGAGACTTATAAAGAACTTGCAACCCAATGCTGGT
CCAATGAACCATTTAATCGACCTACACTTTGTACTGTTATCGAGACTCTA
AGCTCATTATCGTCTTAAATGACGataaaagttgatattattttaagaag
atacaaagaagaagaagatgaagacaacaaccaaacaacaacaatcatca
ataaacatgaagaagaTTTCACTACACTCAAAACACTCGGTTCAGGTGGT
TTTGGGACTTGCTACAAAGCTATATACAAAAAGACACAATTTGTATGCTG
CATTAAGAAAATAAACCGTACTTCGAAGAAAAATGCCGCCCTGCAAAGTT
ACAATGCTGAGACGAAGTCAGAATTCTTTGATTTTGAGCATCAAAACATT
GTCAAACTTATTGCAGCAACTTCAATagattttaacagttttgaCAAAGA
TTTAAGTAgtcttttaatggtttttgagTATGTTCCGGGTCAAAATTTAC
ATCAACTATTGGAAGACGAACAAGAAATTATTGATCTCCCGCGCATGTGC
AGATTCGGACAGGACATTGCTTCAGCTTTAGATTACGTTCATCAGAAAGG
GATCATCCATTTGGACGTCAAACCTTCCAATATAATGGTCACCTCTACAG
ATGTTTGTAAGCTTGCAGATTTTGGCTGCTCACAGTACTTGGAAAGCGAT
CCAGTACAGTCAGAATCTTTGCTAACTGGAACGTTCGCATATAGAGCACC
GGAGCTGCATCGGGGTTTATCACCCACGCCAGAGTGCGATGTTTACGCCG
TAGGAATTTGCTTGTGGCAATTTTGGAGTCGAGAGATGCCATTTGGTGGA
ACCAACCAACATGTTGTAATATATAATGtggttcaaaataatttacgaCC
TGATTTTGAGCTTGACCATATCGACACCCCGAACGAGACTTATAAAGAAC
TTGCAACCCAATGCTGGTCCAATGAACCATTTAATCGACCTACACTTTGT
ACTGTTATCGAGACTCTAAGCTCATTATCGTCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:916973..918884 + |
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