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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:30235..34388+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1196.2.p1 ID=MSTRG.1196.2.p1|Name=MSTRG.1196.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4154bp|location=Sequence derived from alignment at sc0000006_pilon:30235..34388+ (Clytia hemisphaerica_ch_hm2_pilon)
atATGACATGACTACATATGATTTTGAAACGTGTAACGAATTTATCTTTA
GGATGTTGTAGCAAATTTTACCTCTCTCAAACAGGCGACTACCTTTGCTG
ACCGACGGGGGTGTGCTGCTAAGGTTTGAAAAATCGACTCTACATGGGAC
tcgttttttgaatattttgccaaaaattggggaaagaaaaacctaaataa
gaaagaaattccaaaattatctcaaaattttccacttttttcccAATccc
ccaaaaaggtaccctacgaaGGATTAATTTTCTATTTAGGTATTGTTGTG
ACTCTACAGACTCCTGGacgtgaaaaaaggtaccctgaccagcggcacat
cctcgtacccctttttgcccaagtGCCCACCACCCGATCCTTTAAACCAT
AGCAGACAGTGGAGATATTTTCAACGTTGTTTCTGCATGTCATAATTCTA
CATCCTTTATATtggactcttccagaaaaaatctgtTCATGGGTGAAAGA
AAGTCCTAACTGTCCAAGGGATAAATCtgcgatgtccaggggtaaacttt
ggtgtccagggggttaaattgATGAGTGTCCATGGggtggaaaatgaaaa
tgtccaggggtaattcattgaaaaaataatatatcctccacccccaatga
acggattttttctggaagagcccattgcacGATTGCACAGATAATAcagt
tttaaaaatcatataCAGCATGAACAAGCAAGTTCTGTCATTGCTACGTC
TATTTACTTTATCTGTTCCAAATTTTAAAGCATATAAGATAATTGTTGCT
TAACTTTAGTAAACAGAATCCATATCTCTCAATATTCACAACAGCTAAGT
TGCAATATATGTTTGTCCAACGACAAGTTGAACTTTAGAATAAATTgctt
catgttttttttatagatCGCTTCTCAGCTGCTTCCGAAAAATCGACAGA
AACCGAAAGTGGACAAATCGTATACCGTAAAATATCGAACAACAAAAAcc
ctgaatctgaaaaattaTCGATAACAGCCACGACAACTTCTTATATCACC
GACGACTCCCAGACTGGTGAATTggagaaagatttttcaatagATGATGA
TTCTTTGAAGCCAGGATCAGATACTGACTCAGCATTTTCTGTTGAGCAAA
TCCCTACCGAAGAGCTTTTATACATTCTTGGTCCATATCGTCTGTACAGT
ACTATTAACGAGGAAGAGAGCATCGATCAACTCAATAATATCGATTACAA
CGAGAATGTAATTATATCGGATATCAAATTATCGAGACGCCAACAACATA
GCCGAGAAAATAGTTTCGAGTATTTTCCACCTAAAACCACATGTTACGCT
GTGGGTGgtaaaaacaaaccaaaaaagaaaacagacttaaatttccaact
gaaatttgataaacctaacaaacaaaaaacaaaatccgAAAGTTCCGATC
TTAGCCCGATTGATGTTTCCGAAAATTACGCTGGAACTTCGAATGAAGTG
AAAAAAGAACCAAAGAAGAAATCCAGTGGAATCAAGAAAACACCCTCGTT
TAAGGACCGCATTATTTCACCTTTGatgaaaaaaagattcaatAAAAGAT
CAGCAAGCGAATCGAAATTatcgaaaatttccaaatcgATTGAATCGGAA
GAATCGATACAACGAAGTGCAACTGTAGGGAACACAAGCAATATTGCTAG
ATCACCAATCGATAATAACACGAATTTCAAACgatttgacgattttcgaa
aacatatCAATCGACAAACTGTTAAAAATCGACATCCTAGTAGTCAATCA
TCGACAAAATCTTCGAACAAATCAACCGAAAGTTTTGACGAAAGTTTACC
AGAGAACCTGACATTAAATAGACTTGTGGATGAAAACAACGATACAGTTT
TCGAAGATCAATCCAACTTAACGCATAGCGATTGCAGTTTTTCGGAAAGC
GATATCAACGATATGAAAGGACACCGACAACAACGTCAGAAATATTACCG
TAAAAAGGCAAATTCACCGCATCCCAATACTCCTTTGCGGACGGCGTCTC
CAGGCTCTTCAGTCGATTCCCAGTACGGTGGAAGTACATCAAGTTTATCA
ACGGTCAGTTATCAATCAATTAGCACCACGGATGTGTCCTGCTTACCTGA
TAAATTGCTCATCCGTATCTTCACATATCTCGATACAAGTGACGTATgcc
gtttatcaagagtttgTCGCAGGTGGAGCGAATtatatttatcagaaaaa
ctATGGGAACATATCAAAGTTACGAACATGACTAGTCTGGATATTGATTC
GACATTGAATGTAATGTTACAGAGGCTTGCGTATACGACTTCTTGCTTAA
ATATTCGTCAAATGAAACTAGATGGATGTAAGGAGCTCACAGATGAAGGA
ATTCAAACTATGGCTTTAAGATGTCCCGAACTTCGCGCTCTTGAAATTGC
ATCATGTGATCAAGTCACGGCCCGTGGGGTGTATAATGTACTTGTAAACT
GCCCTAACTTAGCATTCCTAAACTTATCAGGCTGTGAAGGCGTTTCGAGT
TTCTCAAACCGTTCTGATATCATAAGTTCACCGTTCAGTTTTGGCGAGTT
GAAATATTTGGATTTGAGCTCATGCTCTTGTTTCACTGATAGCGATATTG
AAATTTTACTCGGACGAGCTCCTTCACTCGAATATCTTTATTTACGACTA
TGCGATTCCATTTCTAACATTGGTATTGAAACAATAGCTAGACGGTGTCC
TAATTTAAAGGAGATTAGTCTTAACGATTGTGTTAATATCACTGACCATG
GCGTGTTGAAGTTACTAGATTCCTGTCATAATTTACGATATGTCAGTCTC
GCAAAATGTCCCATTACAAATATGGTTTTGGAACAAATTGCATCATCGCC
AAATAATTTATTGAGACATTTAAACCTTTACGATTGTGAATATATTACTG
ATATTGCTATCATGAAATTGTCTGCATCATGTCCTAGACTACGCTCTCTT
GATATTGGAAAATGTAGAAAATTAACGGACGCTTCGTTGTACGGACTGTC
TCGTTGTACATTGTTACGGAGATTGAACTTAAAAGGTTGTTGCAAAGTTA
CAGATGCTGGGTTGAGGAAATTAGCCACTATTTGTAAGAATCTGCGACAT
CTTGATGTTAGAGACTGTTTATTCTCACCAGAGACTTACGAATATGTTCG
ACTTCGTTGCCCGTTGTGTGATATACAACGCTCGTATATACATGAATGCT
AAAATTGATATAATAATTACTGCAtattatacacccccttctcacagaca
cggtaagattttttcagccagtggaggGTAAAAATAAGGGACCATAACTC
AATAGGGACTGTTatttccatgttttttatggcttgggatttaaattcca
ttgtttttgagcgggaaaattcagttgggatggaaaaatagaacaaatat
tttgcagtggggatggaaaaatataacaatattCTGCATTGGGGATTGGC
TTATCTGAATATTTTCagcagggacaaaaattagagtataattttccaat
ggggacgatatttttgccaatttttccagtgggaaggattccaagtgggt
ctgtgagaagggtgtgttattatatatttcaaagattataatatatatat
tctaccatgaacatataaacgactggacatccatatcctttgtctttttg
tagaaagggctgctagcttcgttgccgcctcgttaaaagcataaaatgaa
acaatagattttgataatataccacttgggagtacgttgctaacaacgtc
aaaacttcgacaaaagtctctgttgttctactcttctcaactcttttatc
tatatcataacaaagataacagaggcaaaatcatcgtcagcttgtcaaaa
ctccgactattatttctaaattttgacttaaaagtgtctaataattttag
tgagtgtcgcattctaatttcgatattcttatgacacaggctctaaaCTT
TGGCAAACTAtctttttcaagtcataaaaaaattattggagtgattcaaa
agtatacacgcagttgaaattctgcattttagagttgaaaatgttgatat
aatatattacaaacttgtgaaaaaattcgaaaataatttttttgtacatt
agta Coding sequence (CDS) from alignment at sc0000006_pilon:30235..34388+ >MSTRG.1196.2.p1 ID=MSTRG.1196.2.p1|Name=MSTRG.1196.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4734bp|location=Sequence derived from alignment at sc0000006_pilon:30235..34388+ (Clytia hemisphaerica_ch_hm2_pilon)
tATGACATGACTACATATGATTTTGAAACGTatCGCTTCTCAGCTGCTTC
CGAAAAATCGACAGAAACCGAAAGTGGACAAATCGTATACCGTAAAATAT
CGAACAACAAAAAccctgaatctgaaaaattaTCGATAACAGCCACGACA
ACTTCTTATATCACCGACGACTCCCAGACTGGTGAATTggagaaagattt
ttcaatagATGATGATTCTTTGAAGCCAGGATCAGATACTGACTCAGCAT
TTTCTGTTGAGCAAATCCCTACCGAAGAGCTTTTATACATTCTTGGTCCA
TATCGTCTGTACAGTACTATTAACGAGGAAGAGAGCATCGATCAACTCAA
TAATATCGATTACAACGAGAATGTAATTATATCGGATATCAAATTATCGA
GACGCCAACAACATAGCCGAGAAAATAGTTTCGAGTATTTTCCACCTAAA
ACCACATGTTACGCTGTGGGTGgtaaaaacaaaccaaaaaagaaaacaga
cttaaatttccaactgaaatttgataaacctaacaaacaaaaaacaaaat
ccgAAAGTTCCGATCTTAGCCCGATTGATGTTTCCGAAAATTACGCTGGA
ACTTCGAATGAAGTGAAAAAAGAACCAAAGAAGAAATCCAGTGGAATCAA
GAAAACACCCTCGTTTAAGGACCGCATTATTTCACCTTTGatgaaaaaaa
gattcaatAAAAGATCAGCAAGCGAATCGAAATTatcgaaaatttccaaa
tcgATTGAATCGGAAGAATCGATACAACGAAGTGCAACTGTAGGGAACAC
AAGCAATATTGCTAGATCACCAATCGATAATAACACGAATTTCAAACgat
ttgacgattttcgaaaacatatCAATCGACAAACTGTTAAAAATCGACAT
CCTAGTAGTCAATCATCGACAAAATCTTCGAACAAATCAACCGAAAGTTT
TGACGAAAGTTTACCAGAGAACCTGACATTAAATAGACTTGTGGATGAAA
ACAACGATACAGTTTTCGAAGATCAATCCAACTTAACGCATAGCGATTGC
AGTTTTTCGGAAAGCGATATCAACGATATGAAAGGACACCGACAACAACG
TCAGAAATATTACCGTAAAAAGGCAAATTCACCGCATCCCAATACTCCTT
TGCGGACGGCGTCTCCAGGCTCTTCAGTCGATTCCCAGTACGGTGGAAGT
ACATCAAGTTTATCAACGGTCAGTTATCAATCAATTAGCACCACGGATGT
GTCCTGCTTACCTGATAAATTGCTCATCCGTATCTTCACATATCTCGATA
CAAGTGACGTATgccgtttatcaagagtttgTCGCAGGTGGAGCGAATta
tatttatcagaaaaactATGGGAACATATCAAAGTTACGAACATGACTAG
TCTGGATATTGATTCGACATTGAATGTAATGTTACAGAGGCTTGCGTATA
CGACTTCTTGCTTAAATATTCGTCAAATGAAACTAGATGGATGTAAGGAG
CTCACAGATGAAGGAATTCAAACTATGGCTTTAAGATGTCCCGAACTTCG
CGCTCTTGAAATTGCATCATGTGATCAAGTCACGGCCCGTGGGGTGTATA
ATGTACTTGTAAACTGCCCTAACTTAGCATTCCTAAACTTATCAGGCTGT
GAAGGCGTTTCGAGTTTCTCAAACCGTTCTGATATCATAAGTTCACCGTT
CAGTTTTGGCGAGTTGAAATATTTGGATTTGAGCTCATGCTCTTGTTTCA
CTGATAGCGATATTGAAATTTTACTCGGACGAGCTCCTTCACTCGAATAT
CTTTATTTACGACTATGCGATTCCATTTCTAACATTGGTATTGAAACAAT
AGCTAGACGGTGTCCTAATTTAAAGGAGATTAGTCTTAACGATTGTGTTA
ATATCACTGACCATGGCGTGTTGAAGTTACTAGATTCCTGTCATAATTTA
CGATATGTCAGTCTCGCAAAATGTCCCATTACAAATATGGTTTTGGAACA
AATTGCATCATCGCCAAATAATTTATTGAGACATTTAAACCTTTACGATT
GTGAATATATTACTGATATTGCTATCATGAAATTGTCTGCATCATGTCCT
AGACTACGCTCTCTTGATATTGGAAAATGTAGAAAATTAACGGACGCTTC
GTTGTACGGACTGTCTCGTTGTACATTGTTACGGAGATTGAACTTAAAAG
GTTGTTGCAAAGTTACAGATGCTGGGTTGAGGAAATTAGCCACTATTTGT
AAGAATCTGCGACATCTTGATGTTAGAGACTGTTTATTCTCACCAGAGAC
TTACGAATATGTTCGACTTCGTTGCCCGTTGTGTGATATACAACGCTCGT
ATATACATGAATGCTAAtATGACATGACTACATATGATTTTGAAACGTat
CGCTTCTCAGCTGCTTCCGAAAAATCGACAGAAACCGAAAGTGGACAAAT
CGTATACCGTAAAATATCGAACAACAAAAAccctgaatctgaaaaattaT
CGATAACAGCCACGACAACTTCTTATATCACCGACGACTCCCAGACTGGT
GAATTggagaaagatttttcaatagATGATGATTCTTTGAAGCCAGGATC
AGATACTGACTCAGCATTTTCTGTTGAGCAAATCCCTACCGAAGAGCTTT
TATACATTCTTGGTCCATATCGTCTGTACAGTACTATTAACGAGGAAGAG
AGCATCGATCAACTCAATAATATCGATTACAACGAGAATGTAATTATATC
GGATATCAAATTATCGAGACGCCAACAACATAGCCGAGAAAATAGTTTCG
AGTATTTTCCACCTAAAACCACATGTTACGCTGTGGGTGgtaaaaacaaa
ccaaaaaagaaaacagacttaaatttccaactgaaatttgataaacctaa
caaacaaaaaacaaaatccgAAAGTTCCGATCTTAGCCCGATTGATGTTT
CCGAAAATTACGCTGGAACTTCGAATGAAGTGAAAAAAGAACCAAAGAAG
AAATCCAGTGGAATCAAGAAAACACCCTCGTTTAAGGACCGCATTATTTC
ACCTTTGatgaaaaaaagattcaatAAAAGATCAGCAAGCGAATCGAAAT
TatcgaaaatttccaaatcgATTGAATCGGAAGAATCGATACAACGAAGT
GCAACTGTAGGGAACACAAGCAATATTGCTAGATCACCAATCGATAATAA
CACGAATTTCAAACgatttgacgattttcgaaaacatatCAATCGACAAA
CTGTTAAAAATCGACATCCTAGTAGTCAATCATCGACAAAATCTTCGAAC
AAATCAACCGAAAGTTTTGACGAAAGTTTACCAGAGAACCTGACATTAAA
TAGACTTGTGGATGAAAACAACGATACAGTTTTCGAAGATCAATCCAACT
TAACGCATAGCGATTGCAGTTTTTCGGAAAGCGATATCAACGATATGAAA
GGACACCGACAACAACGTCAGAAATATTACCGTAAAAAGGCAAATTCACC
GCATCCCAATACTCCTTTGCGGACGGCGTCTCCAGGCTCTTCAGTCGATT
CCCAGTACGGTGGAAGTACATCAAGTTTATCAACGGTCAGTTATCAATCA
ATTAGCACCACGGATGTGTCCTGCTTACCTGATAAATTGCTCATCCGTAT
CTTCACATATCTCGATACAAGTGACGTATgccgtttatcaagagtttgTC
GCAGGTGGAGCGAATtatatttatcagaaaaactATGGGAACATATCAAA
GTTACGAACATGACTAGTCTGGATATTGATTCGACATTGAATGTAATGTT
ACAGAGGCTTGCGTATACGACTTCTTGCTTAAATATTCGTCAAATGAAAC
TAGATGGATGTAAGGAGCTCACAGATGAAGGAATTCAAACTATGGCTTTA
AGATGTCCCGAACTTCGCGCTCTTGAAATTGCATCATGTGATCAAGTCAC
GGCCCGTGGGGTGTATAATGTACTTGTAAACTGCCCTAACTTAGCATTCC
TAAACTTATCAGGCTGTGAAGGCGTTTCGAGTTTCTCAAACCGTTCTGAT
ATCATAAGTTCACCGTTCAGTTTTGGCGAGTTGAAATATTTGGATTTGAG
CTCATGCTCTTGTTTCACTGATAGCGATATTGAAATTTTACTCGGACGAG
CTCCTTCACTCGAATATCTTTATTTACGACTATGCGATTCCATTTCTAAC
ATTGGTATTGAAACAATAGCTAGACGGTGTCCTAATTTAAAGGAGATTAG
TCTTAACGATTGTGTTAATATCACTGACCATGGCGTGTTGAAGTTACTAG
ATTCCTGTCATAATTTACGATATGTCAGTCTCGCAAAATGTCCCATTACA
AATATGGTTTTGGAACAAATTGCATCATCGCCAAATAATTTATTGAGACA
TTTAAACCTTTACGATTGTGAATATATTACTGATATTGCTATCATGAAAT
TGTCTGCATCATGTCCTAGACTACGCTCTCTTGATATTGGAAAATGTAGA
AAATTAACGGACGCTTCGTTGTACGGACTGTCTCGTTGTACATTGTTACG
GAGATTGAACTTAAAAGGTTGTTGCAAAGTTACAGATGCTGGGTTGAGGA
AATTAGCCACTATTTGTAAGAATCTGCGACATCTTGATGTTAGAGACTGT
TTATTCTCACCAGAGACTTACGAATATGTTCGACTTCGTTGCCCGTTGTG
TGATATACAACGCTCGTATATACATGAATGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:30235..34388 + |
|
