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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:28540..34794+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1196.1.p1 ID=MSTRG.1196.1.p1|Name=MSTRG.1196.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6255bp|location=Sequence derived from alignment at sc0000006_pilon:28540..34794+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGCAAACGAGGCtttttttGCTAAGATTTGTTTTCGTTTAGTATTAT
CTTAGTTGTTTTGTTAGCAAATACTTTGAGATTTATACGTATTTATAATA
AAGAAGAACTTTAGTTAGTATGAGAGAAAATGGCTCCATAATCCTCTATC
ACAATATGATTTCCATGTTTTGCAAGGTTCATTTTAGGGATCTGTGAGCA
GCTATATGTGATGacaaaatttaatctttttgCATGAGATTTGGTTTCGA
CTCCTATTCTGTGGTCAACTTCATTCATATTGATTTTTTACTTCATTCTT
CGGTGGTTCGGTAGCCTTGTTGATTTCTCTTCATCGTCACTACAGTATAG
AAGTTtttatattggaagtttatcgtgatttggatcacgagatttacgtt
tcgagagattcttctcccatcatcgggcaatgtgGATAATACCTTCTGAT
AATACCCATAATTATCCAGTGTAACCTCCTTACAAGGTATGAATCCCCTT
GTTACAATAGGTGTAAGATAAATTATTTCTTGAATTTATGAGATTACTCA
TTACTCTGATTCCCATTTCGCCTCTCTGTCTGGATGTTAGGCACTCAAAT
ATCGGGTAGAATGGTTGAAATGCTGTTAATGTGATTCTCATCCTTTAAGG
AATGAATCGtctcttttatctttcttcCTTCTTATACAGTAGTAAGAAGA
TTCAATCCATGATTCGCGATTCAGTTTCATAATTTTCAGGTTGAATTAAA
ATAATAATCTGCATTACATTTCAATATTCATGTTCAAACCCTTCTTCACA
AATGGTCAGATGTTATTTGTTTCTGATGTGATGAAAGCTTCTAAATACCG
GTGTTGATTCACTGACAAATCTTAGATGTAGTTCCCGCAAATTTGTTTTT
CCCAGCGTACTTATACATCTTTGACGACAACACTGTTACTCAAGTTTAAT
TTTTATCTCAGTGAAGGAGAGCCACGATTTCCTTGTTTGGAGCATTGGTA
CTGGATTCCCTCTCTCCTCCATAATGCtttttttAGCTATTTCTCACAGA
TTGTTTGTTTGGCTGAAGCAACTTGATACCTCAATGTAAGAGTATATCCC
ATGCATAGATTTGTTGCTGACGTGTAAAGTAGGCTATATTTCTAACACTT
GACAAAATCGTGATTTCAGATTATTTGCCAAGTCGTTCATGgtagaaaga
attttgtcatatttatgAAATGTTTAGTTTGTGAAAGTTACATCATTATG
TTAGAAATCTGGAAGCATAAGATAATTTTTGTTAGAGTTGGTAACAGAAT
TCAGATCAGTTTGTAGATCAAAATTAGACGTATAACTAGAGGTTTTAAGA
TCTCTATACTCTGTTTTTAATGCTctgtcattttgttttcttttagcaGT
CGATTAAATGAAACAGAGAAAGGAAGTACATAAAAAGCTGACCAAAACTG
CAATTTGATACCCACTTGAAGTTTGAATCAATTGGTTTTTGAAGGCTACT
CGATTTGTCATTCGAAAAAGGGCTGTCTTCATGAGTCTTCATGTTGTTGT
TATTGAAAGCAATAAAAACGTAATTTGACCAAACTATTCTGTTCGTCGTT
GAGAAAATGTTGAAGTTTGCAAAAGCTACTGACAGGAGAGGTAACGtttt
tagagatcactttctgtttggattttctttttaacttgttttttaatATG
ACATGACTACATATGATTTTGAAACGTGTAACGAATTTATCTTTAGGATG
TTGTAGCAAATTTTACCTCTCTCAAACAGGCGACTACCTTTGCTGACCGA
CGGGGGTGTGCTGCTAAGGTTTGAAAAATCGACTCTACATGGGACtcgtt
ttttgaatattttgccaaaaattggggaaagaaaaacctaaataagaaag
aaattccaaaattatctcaaaattttccacttttttcccAATcccccaaa
aaggtaccctacgaaGGATTAATTTTCTATTTAGGTATTGTTGTGACTCT
ACAGACTCCTGGacgtgaaaaaaggtaccctgaccagcggcacatcctcg
tacccctttttgcccaagtGCCCACCACCCGATCCTTTAAACCATAGCAG
ACAGTGGAGATATTTTCAACGTTGTTTCTGCATGTCATAATTCTACATCC
TTTATATtggactcttccagaaaaaatctgtTCATGGGTGAAAGAAAGTC
CTAACTGTCCAAGGGATAAATCtgcgatgtccaggggtaaactttggtgt
ccagggggttaaattgATGAGTGTCCATGGggtggaaaatgaaaatgtcc
aggggtaattcattgaaaaaataatatatcctccacccccaatgaacgga
ttttttctggaagagcccattgcacGATTGCACAGATAATAcagttttaa
aaatcatataCAGCATGAACAAGCAAGTTCTGTCATTGCTACGTCTATTT
ACTTTATCTGTTCCAAATTTTAAAGCATATAAGATAATTGTTGCTTAACT
TTAGTAAACAGAATCCATATCTCTCAATATTCACAACAGCTAAGTTGCAA
TATATGTTTGTCCAACGACAAGTTGAACTTTAGAATAAATTgcttcatgt
tttttttatagatCGCTTCTCAGCTGCTTCCGAAAAATCGACAGAAACCG
AAAGTGGACAAATCGTATACCGTAAAATATCGAACAACAAAAAccctgaa
tctgaaaaattaTCGATAACAGCCACGACAACTTCTTATATCACCGACGA
CTCCCAGACTGGTGAATTggagaaagatttttcaatagATGATGATTCTT
TGAAGCCAGGATCAGATACTGACTCAGCATTTTCTGTTGAGCAAATCCCT
ACCGAAGAGCTTTTATACATTCTTGGTCCATATCGTCTGTACAGTACTAT
TAACGAGGAAGAGAGCATCGATCAACTCAATAATATCGATTACAACGAGA
ATGTAATTATATCGGATATCAAATTATCGAGACGCCAACAACATAGCCGA
GAAAATAGTTTCGAGTATTTTCCACCTAAAACCACATGTTACGCTGTGGG
TGgtaaaaacaaaccaaaaaagaaaacagacttaaatttccaactgaaat
ttgataaacctaacaaacaaaaaacaaaatccgAAAGTTCCGATCTTAGC
CCGATTGATGTTTCCGAAAATTACGCTGGAACTTCGAATGAAGTGAAAAA
AGAACCAAAGAAGAAATCCAGTGGAATCAAGAAAACACCCTCGTTTAAGG
ACCGCATTATTTCACCTTTGatgaaaaaaagattcaatAAAAGATCAGCA
AGCGAATCGAAATTatcgaaaatttccaaatcgATTGAATCGGAAGAATC
GATACAACGAAGTGCAACTGTAGGGAACACAAGCAATATTGCTAGATCAC
CAATCGATAATAACACGAATTTCAAACgatttgacgattttcgaaaacat
atCAATCGACAAACTGTTAAAAATCGACATCCTAGTAGTCAATCATCGAC
AAAATCTTCGAACAAATCAACCGAAAGTTTTGACGAAAGTTTACCAGAGA
ACCTGACATTAAATAGACTTGTGGATGAAAACAACGATACAGTTTTCGAA
GATCAATCCAACTTAACGCATAGCGATTGCAGTTTTTCGGAAAGCGATAT
CAACGATATGAAAGGACACCGACAACAACGTCAGAAATATTACCGTAAAA
AGGCAAATTCACCGCATCCCAATACTCCTTTGCGGACGGCGTCTCCAGGC
TCTTCAGTCGATTCCCAGTACGGTGGAAGTACATCAAGTTTATCAACGGT
CAGTTATCAATCAATTAGCACCACGGATGTGTCCTGCTTACCTGATAAAT
TGCTCATCCGTATCTTCACATATCTCGATACAAGTGACGTATgccgttta
tcaagagtttgTCGCAGGTGGAGCGAATtatatttatcagaaaaactATG
GGAACATATCAAAGTTACGAACATGACTAGTCTGGATATTGATTCGACAT
TGAATGTAATGTTACAGAGGCTTGCGTATACGACTTCTTGCTTAAATATT
CGTCAAATGAAACTAGATGGATGTAAGGAGCTCACAGATGAAGGAATTCA
AACTATGGCTTTAAGATGTCCCGAACTTCGCGCTCTTGAAATTGCATCAT
GTGATCAAGTCACGGCCCGTGGGGTGTATAATGTACTTGTAAACTGCCCT
AACTTAGCATTCCTAAACTTATCAGGCTGTGAAGGCGTTTCGAGTTTCTC
AAACCGTTCTGATATCATAAGTTCACCGTTCAGTTTTGGCGAGTTGAAAT
ATTTGGATTTGAGCTCATGCTCTTGTTTCACTGATAGCGATATTGAAATT
TTACTCGGACGAGCTCCTTCACTCGAATATCTTTATTTACGACTATGCGA
TTCCATTTCTAACATTGGTATTGAAACAATAGCTAGACGGTGTCCTAATT
TAAAGGAGATTAGTCTTAACGATTGTGTTAATATCACTGACCATGGCGTG
TTGAAGTTACTAGATTCCTGTCATAATTTACGATATGTCAGTCTCGCAAA
ATGTCCCATTACAAATATGGTTTTGGAACAAATTGCATCATCGCCAAATA
ATTTATTGAGACATTTAAACCTTTACGATTGTGAATATATTACTGATATT
GCTATCATGAAATTGTCTGCATCATGTCCTAGACTACGCTCTCTTGATAT
TGGAAAATGTAGAAAATTAACGGACGCTTCGTTGTACGGACTGTCTCGTT
GTACATTGTTACGGAGATTGAACTTAAAAGGTTGTTGCAAAGTTACAGAT
GCTGGGTTGAGGAAATTAGCCACTATTTGTAAGAATCTGCGACATCTTGA
TGTTAGAGACTGTTTATTCTCACCAGAGACTTACGAATATGTTCGACTTC
GTTGCCCGTTGTGTGATATACAACGCTCGTATATACATGAATGCTAAAAT
TGATATAATAATTACTGCAtattatacacccccttctcacagacacggta
agattttttcagccagtggaggGTAAAAATAAGGGACCATAACTCAATAG
GGACTGTTatttccatgttttttatggcttgggatttaaattccattgtt
tttgagcgggaaaattcagttgggatggaaaaatagaacaaatattttgc
agtggggatggaaaaatataacaatattCTGCATTGGGGATTGGCTTATC
TGAATATTTTCagcagggacaaaaattagagtataattttccaatgggga
cgatatttttgccaatttttccagtgggaaggattccaagtgggtctgtg
agaagggtgtgttattatatatttcaaagattataatatatatattctac
catgaacatataaacgactggacatccatatcctttgtctttttgtagaa
agggctgctagcttcgttgccgcctcgttaaaagcataaaatgaaacaat
agattttgataatataccacttgggagtacgttgctaacaacgtcaaaac
ttcgacaaaagtctctgttgttctactcttctcaactcttttatctatat
cataacaaagataacagaggcaaaatcatcgtcagcttgtcaaaactccg
actattatttctaaattttgacttaaaagtgtctaataattttagtgagt
gtcgcattctaatttcgatattcttatgacacaggctctaaaCTTTGGCA
AACTAtctttttcaagtcataaaaaaattattggagtgattcaaaagtat
acacgcagttgaaattctgcattttagagttgaaaatgttgatataatat
attacaaacttgtgaaaaaattcgaaaataatttttttgtacattagtag
taatgttcaagctctatcaatccttttacctaaataattcaaagaaataa
aattatgacagaatattgtcggatttttcataccagttttgaaatacagg
cggcaacgaagctcgcttcaaagagacaataaaagataaatgtccagtcg
tttatatgttcatgatacgTCTAACACTCGGGTAACACTCTTTTGTGATT
AAGGgtattttcgattttacaccaacttaaatgggatgagatggagtttt
tacaagctcttatttgatttggttggtcgttagccagtaataaaacaatt
tcgttactttttctaaagaacacgtcatttttattacttcaaatgaccaa
ttattaaggtatcttataaaaactccatctcatctgacttaaatggcaat
ttctg Coding sequence (CDS) from alignment at sc0000006_pilon:28540..34794+ >MSTRG.1196.1.p1 ID=MSTRG.1196.1.p1|Name=MSTRG.1196.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4740bp|location=Sequence derived from alignment at sc0000006_pilon:28540..34794+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAGTTTGCAAAAGCTACTGACAGGAGAGatCGCTTCTCAGCTGC
TTCCGAAAAATCGACAGAAACCGAAAGTGGACAAATCGTATACCGTAAAA
TATCGAACAACAAAAAccctgaatctgaaaaattaTCGATAACAGCCACG
ACAACTTCTTATATCACCGACGACTCCCAGACTGGTGAATTggagaaaga
tttttcaatagATGATGATTCTTTGAAGCCAGGATCAGATACTGACTCAG
CATTTTCTGTTGAGCAAATCCCTACCGAAGAGCTTTTATACATTCTTGGT
CCATATCGTCTGTACAGTACTATTAACGAGGAAGAGAGCATCGATCAACT
CAATAATATCGATTACAACGAGAATGTAATTATATCGGATATCAAATTAT
CGAGACGCCAACAACATAGCCGAGAAAATAGTTTCGAGTATTTTCCACCT
AAAACCACATGTTACGCTGTGGGTGgtaaaaacaaaccaaaaaagaaaac
agacttaaatttccaactgaaatttgataaacctaacaaacaaaaaacaa
aatccgAAAGTTCCGATCTTAGCCCGATTGATGTTTCCGAAAATTACGCT
GGAACTTCGAATGAAGTGAAAAAAGAACCAAAGAAGAAATCCAGTGGAAT
CAAGAAAACACCCTCGTTTAAGGACCGCATTATTTCACCTTTGatgaaaa
aaagattcaatAAAAGATCAGCAAGCGAATCGAAATTatcgaaaatttcc
aaatcgATTGAATCGGAAGAATCGATACAACGAAGTGCAACTGTAGGGAA
CACAAGCAATATTGCTAGATCACCAATCGATAATAACACGAATTTCAAAC
gatttgacgattttcgaaaacatatCAATCGACAAACTGTTAAAAATCGA
CATCCTAGTAGTCAATCATCGACAAAATCTTCGAACAAATCAACCGAAAG
TTTTGACGAAAGTTTACCAGAGAACCTGACATTAAATAGACTTGTGGATG
AAAACAACGATACAGTTTTCGAAGATCAATCCAACTTAACGCATAGCGAT
TGCAGTTTTTCGGAAAGCGATATCAACGATATGAAAGGACACCGACAACA
ACGTCAGAAATATTACCGTAAAAAGGCAAATTCACCGCATCCCAATACTC
CTTTGCGGACGGCGTCTCCAGGCTCTTCAGTCGATTCCCAGTACGGTGGA
AGTACATCAAGTTTATCAACGGTCAGTTATCAATCAATTAGCACCACGGA
TGTGTCCTGCTTACCTGATAAATTGCTCATCCGTATCTTCACATATCTCG
ATACAAGTGACGTATgccgtttatcaagagtttgTCGCAGGTGGAGCGAA
TtatatttatcagaaaaactATGGGAACATATCAAAGTTACGAACATGAC
TAGTCTGGATATTGATTCGACATTGAATGTAATGTTACAGAGGCTTGCGT
ATACGACTTCTTGCTTAAATATTCGTCAAATGAAACTAGATGGATGTAAG
GAGCTCACAGATGAAGGAATTCAAACTATGGCTTTAAGATGTCCCGAACT
TCGCGCTCTTGAAATTGCATCATGTGATCAAGTCACGGCCCGTGGGGTGT
ATAATGTACTTGTAAACTGCCCTAACTTAGCATTCCTAAACTTATCAGGC
TGTGAAGGCGTTTCGAGTTTCTCAAACCGTTCTGATATCATAAGTTCACC
GTTCAGTTTTGGCGAGTTGAAATATTTGGATTTGAGCTCATGCTCTTGTT
TCACTGATAGCGATATTGAAATTTTACTCGGACGAGCTCCTTCACTCGAA
TATCTTTATTTACGACTATGCGATTCCATTTCTAACATTGGTATTGAAAC
AATAGCTAGACGGTGTCCTAATTTAAAGGAGATTAGTCTTAACGATTGTG
TTAATATCACTGACCATGGCGTGTTGAAGTTACTAGATTCCTGTCATAAT
TTACGATATGTCAGTCTCGCAAAATGTCCCATTACAAATATGGTTTTGGA
ACAAATTGCATCATCGCCAAATAATTTATTGAGACATTTAAACCTTTACG
ATTGTGAATATATTACTGATATTGCTATCATGAAATTGTCTGCATCATGT
CCTAGACTACGCTCTCTTGATATTGGAAAATGTAGAAAATTAACGGACGC
TTCGTTGTACGGACTGTCTCGTTGTACATTGTTACGGAGATTGAACTTAA
AAGGTTGTTGCAAAGTTACAGATGCTGGGTTGAGGAAATTAGCCACTATT
TGTAAGAATCTGCGACATCTTGATGTTAGAGACTGTTTATTCTCACCAGA
GACTTACGAATATGTTCGACTTCGTTGCCCGTTGTGTGATATACAACGCT
CGTATATACATGAATGCTAAATGTTGAAGTTTGCAAAAGCTACTGACAGG
AGAGatCGCTTCTCAGCTGCTTCCGAAAAATCGACAGAAACCGAAAGTGG
ACAAATCGTATACCGTAAAATATCGAACAACAAAAAccctgaatctgaaa
aattaTCGATAACAGCCACGACAACTTCTTATATCACCGACGACTCCCAG
ACTGGTGAATTggagaaagatttttcaatagATGATGATTCTTTGAAGCC
AGGATCAGATACTGACTCAGCATTTTCTGTTGAGCAAATCCCTACCGAAG
AGCTTTTATACATTCTTGGTCCATATCGTCTGTACAGTACTATTAACGAG
GAAGAGAGCATCGATCAACTCAATAATATCGATTACAACGAGAATGTAAT
TATATCGGATATCAAATTATCGAGACGCCAACAACATAGCCGAGAAAATA
GTTTCGAGTATTTTCCACCTAAAACCACATGTTACGCTGTGGGTGgtaaa
aacaaaccaaaaaagaaaacagacttaaatttccaactgaaatttgataa
acctaacaaacaaaaaacaaaatccgAAAGTTCCGATCTTAGCCCGATTG
ATGTTTCCGAAAATTACGCTGGAACTTCGAATGAAGTGAAAAAAGAACCA
AAGAAGAAATCCAGTGGAATCAAGAAAACACCCTCGTTTAAGGACCGCAT
TATTTCACCTTTGatgaaaaaaagattcaatAAAAGATCAGCAAGCGAAT
CGAAATTatcgaaaatttccaaatcgATTGAATCGGAAGAATCGATACAA
CGAAGTGCAACTGTAGGGAACACAAGCAATATTGCTAGATCACCAATCGA
TAATAACACGAATTTCAAACgatttgacgattttcgaaaacatatCAATC
GACAAACTGTTAAAAATCGACATCCTAGTAGTCAATCATCGACAAAATCT
TCGAACAAATCAACCGAAAGTTTTGACGAAAGTTTACCAGAGAACCTGAC
ATTAAATAGACTTGTGGATGAAAACAACGATACAGTTTTCGAAGATCAAT
CCAACTTAACGCATAGCGATTGCAGTTTTTCGGAAAGCGATATCAACGAT
ATGAAAGGACACCGACAACAACGTCAGAAATATTACCGTAAAAAGGCAAA
TTCACCGCATCCCAATACTCCTTTGCGGACGGCGTCTCCAGGCTCTTCAG
TCGATTCCCAGTACGGTGGAAGTACATCAAGTTTATCAACGGTCAGTTAT
CAATCAATTAGCACCACGGATGTGTCCTGCTTACCTGATAAATTGCTCAT
CCGTATCTTCACATATCTCGATACAAGTGACGTATgccgtttatcaagag
tttgTCGCAGGTGGAGCGAATtatatttatcagaaaaactATGGGAACAT
ATCAAAGTTACGAACATGACTAGTCTGGATATTGATTCGACATTGAATGT
AATGTTACAGAGGCTTGCGTATACGACTTCTTGCTTAAATATTCGTCAAA
TGAAACTAGATGGATGTAAGGAGCTCACAGATGAAGGAATTCAAACTATG
GCTTTAAGATGTCCCGAACTTCGCGCTCTTGAAATTGCATCATGTGATCA
AGTCACGGCCCGTGGGGTGTATAATGTACTTGTAAACTGCCCTAACTTAG
CATTCCTAAACTTATCAGGCTGTGAAGGCGTTTCGAGTTTCTCAAACCGT
TCTGATATCATAAGTTCACCGTTCAGTTTTGGCGAGTTGAAATATTTGGA
TTTGAGCTCATGCTCTTGTTTCACTGATAGCGATATTGAAATTTTACTCG
GACGAGCTCCTTCACTCGAATATCTTTATTTACGACTATGCGATTCCATT
TCTAACATTGGTATTGAAACAATAGCTAGACGGTGTCCTAATTTAAAGGA
GATTAGTCTTAACGATTGTGTTAATATCACTGACCATGGCGTGTTGAAGT
TACTAGATTCCTGTCATAATTTACGATATGTCAGTCTCGCAAAATGTCCC
ATTACAAATATGGTTTTGGAACAAATTGCATCATCGCCAAATAATTTATT
GAGACATTTAAACCTTTACGATTGTGAATATATTACTGATATTGCTATCA
TGAAATTGTCTGCATCATGTCCTAGACTACGCTCTCTTGATATTGGAAAA
TGTAGAAAATTAACGGACGCTTCGTTGTACGGACTGTCTCGTTGTACATT
GTTACGGAGATTGAACTTAAAAGGTTGTTGCAAAGTTACAGATGCTGGGT
TGAGGAAATTAGCCACTATTTGTAAGAATCTGCGACATCTTGATGTTAGA
GACTGTTTATTCTCACCAGAGACTTACGAATATGTTCGACTTCGTTGCCC
GTTGTGTGATATACAACGCTCGTATATACATGAATGCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:28540..34794 + |
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