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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:768448..772508+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11958.1.p1 ID=MSTRG.11958.1.p1|Name=MSTRG.11958.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4061bp|location=Sequence derived from alignment at sc0000088_pilon:768448..772508+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGTAATTTGAAATTGGAAAGTAATTGTGTTAATATACACTATACATGTT
ATTTAATTGTTTGTTAATTTGGTGTGGGAATTACTGTCtcataatgaaaa
aaaaagaattttatctACTTATGTcacatgttttttttcattaaatttgg
aATTGATGGCAAGGATGTTTCATGTCTTCCAACATTTTGGTCATTGTTTA
ACCATGGTATATTTTATATGTATTTTATATCCTTATGCTCATGCAAATTC
ATTGTAGATTTACAAAGAGACTGGGTTCACAGAATTTATTTCaaacaaaa
ccaaaatattttggaaatacaTCCACCTTCTCTTGTACCAAAAACTGTAT
GAAATAAGCAGGGATTGAGTTTATTAGGGTGTCTAATGTGAATTGATACA
TATTCacataccttattacacttataaCTACCTAAgttatttgtactagt
aatctcatggttatgaggAGTATTTAGGATAAGATTCCTgaggtcacttt
tgaaatttaaaatatttcgaaatttgactgagggtaatttatccagaatt
tcacgaaaacaagcatgagATTCCTggttgaaattctaacaattttgAAA
GACGTCAAAACACTGGAGATCAAtctgaaacttaaaaaaaagagGTCTCC
AAAAAGTCATACAAAGGCGATTCGAGTTTTAATTGGGTAATATTCCATTT
ACTTAGTCTTAAGCCttcgaagttagtaagaaattcgaaaaaggCGATGA
ATTTCCAAAGGATGGGAATTTCACTTTTgtgggaaattacaaaatttagg
agggaaattacaagtttgtgggaaattacaaattaacgtaagcaaaaacg
tcgatcaaatttcaatcaaccatgagattataaCGCTAATTGGCTACCCT
CTGCCTTTTGCGTTAATTAATTGTTGCACTCAtttttttCTGCATTTAAC
TCTTGATTTATAATATAAGTGTAATAAGTTATACTCGCTTTTGGCTCTGG
TAAACTCAGAACTCATAACCCATCCCATTATTgggtaattttatttcttt
attgtggcacatcttttttcatttagagtttaaattttatctttCAGGGT
aagttaaattctttttttactaaTTAATACATAAAATCCACCATGAGGGA
TAATGCACTTCCATACCATAACACTAAACGTCCCATCATTATGGCAATGT
TCAGTGGCCCTGGACCCGCCTGCGTCGGTCGACTTGGTCTTGACAATGGG
CCTAAATATTCATTTGGTTTGAAACCTGGTCAGCGGGTAGATGCTTTCAC
TCCTGGTCCTGCTGCATACACAGTTCATGATAAGTCAACACGGTTTGGTA
GTGATGGTTCCCCTAAATACACACTTCACTCACGCACGAAACAAGGAAAC
TCCTTCACCACTCCGGGACCAggtaaaataaacaattttctaCAAAactt
ttacaagaatttttcatCCCAAGCTGAGTAAATACTAAATGCCTGAACGG
AAAGAATCTTAATGTACAACCTTATACTAATTTGTAGCTTACGTACTTCG
ATCAAATAATCCAttttaaactaattttttaAGTGCGTTtcctaaatttc
ttttgaacTGATCGTTTTGGTAATAAACTTTATTTCCTATTCATATCATT
ATAGCTGCCTATTCAACAGAAAAAGTAAAGATATTCAAGCAACCAACACC
ACCCAGTTATTCATTCGGATCAAGAACTCGTTTCAATAAACGTGATGGGT
CACCGGCACCTAATGCTTATACCGTACCTCCCATTTTCGGCTCCAAAACG
CCCACTAAACGTTCGCCACCCGCTTATGTAATGACGGGTCGAGGGCGTGT
GGGTGGATTCAGTGAAGACTTGAGTAAGGTCAGACATCTTTGCTTATTCT
TCAACCTACAAAGCAGTCTTTCTTGAGTTAGGGAACAATTCTAGTCGAGA
AGTTGCTAGTTGCTACTTTCGAGTTCGGAAGTTGCTAGTTTCAGTTGGTC
AGACGTCTTTGGTTGTTTGTCAATCTAATAAATAATCTTAGATTTATCCA
TGAGCGAATCTAATACGATTCTGCTCATCAAAGTTTATCCATTCCTTATT
GAACAAAAAGAAGTCTTTCGTTACGTCGCACTTCAATTATTTGAACCTTT
CTATAATTGGAAATAATTATCAGTCCTCGCCAAGGTGGAACCCTCTCAAA
ATACTTCCTATCATTTGATATCTCTAATGTTTTTCGACCAAAAGCAAATT
TCGAATTAGTGACAGTCAACTTTTTATACTCGATTGTTTAATCGTTTCAG
ACACCTGGGCCGGGGACTTATAAAGTGAACGATCCAAATTCATGGAAACA
TCGGGCGCCAAGCTACTCAATCAGTGGTCGATTTATGATGCCTGGTGATT
CAACACAAAAGCCTGGACCTGCGCATTACAGTCCTCATAAGGTAACATTT
GTGTTTTGTTAATTACTGTTTGCTTTGTGTTGTTTCGGTCGATGTTGGTT
ATATTCGAGCTTAATTTGAGTGAAAAGAATTCATATTTTTCTATTCAAGA
TTGTTTTAAATAATGAATTAATTAGTGGGTGAAAAAGAAGTAATCAATTT
TATCCACTATCCTTTGTGTTGTCGAAGTGGGCAAGATTTCATTTTTCGGA
CTAAGATTAAAATTAAGACTCGCTTTTTCGGAATACCagcgaaaagaatt
tttttttcaagaggtACGGAAAACAGCCTTCTGCCAAATGGCTGACTGAA
GTTCATTTATCAAATACCCGAAATGTTGATCTTTTTCTGCTGGAAAATTG
CAGTGAAATCTTCATGAAGTCATCAGACTCATTTCGACGGACGGTATTCG
TCatatagataatttaaaatattaaaataaaatattaaagtattaaaata
tataCAGATACATTTATCATGATTTGACTTGGCCAAAAAACAAGAAGACC
TACTAAAGTAAGCTTTTTTGCTAGTgttgatttgattgaaattgTTCTAT
ATTTCCGTTTCTCATTTCAGCAAAGATCCGGAACTGGTCCATCTTTTGGT
GTACGGCATTCAGAATATACCGCACCTGTTCTTTTCTCTACATGCTGATT
GGTTGTCGCCTGCAATTTGAttggatttgaaaatgttttatctGCAAGCT
GATTGGTTAAAGATGTTGACAATGCgaactgattggttgaaaatatTAAC
TATGCAAGCTGATTGGTTTGTTTAAAGTGTTATTTGTGGATGGGAAGTTC
TGATTAAATTACATTCCAGAGATAAATTGAAGTGTGCTTTCATGGTTCTT
TGTTGTGTGCTttttagtttgattttaaataaataGTTTTTATCCACTCT
GTCTTAGTAATATACTAATTCATAGATACTTTGATTAACTGCTCTGTTCT
TTTGTGCTTACTTGTAGTGGATGGGGCTATACTGGATTTTTTATGCTGTT
ACTCattccccagctggcacacaacgtcttGTACACGCTGGGTCTGAAAC
AGTTTAAATATTTGACGAATCGAAAGCGAAAGTATAACTTTAGAAATAAC
TTTCTTTTTCCGCAATCCCTTATTCCTAGTTCCTTATGACCCTTCCCTCA
CTACACTCAAGCACCAGAGATCTCCATGTAGGGTAAGtatatcttttact
ttcgactattttttcttgtcttgtattattattttgttattctttctaaa
atcaaattttacagGAAGGCTTTACTCCaaattttataatctttttctgT
AACATATACAactcaaatttttttaacaaattattttatttttaagtgat
ttatatatttttttcttcttaacaaatttatatacacgttttttttatta
gaacccagtttataagaacattgaggctgaaattcgtcgaaaaattaata
acatcgtaagaacatgcccagcctcagtttggaaaaaaatgacgagAAAC
TACAATTCTAACTGAACTTAGAGATGAATTTCCTAAAACCGAAAGTCAag
tattgtccaaattttaccaattttaagtgctctttattttgcatgatatt
gtcgatttaca Coding sequence (CDS) from alignment at sc0000088_pilon:768448..772508+ >MSTRG.11958.1.p1 ID=MSTRG.11958.1.p1|Name=MSTRG.11958.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2892bp|location=Sequence derived from alignment at sc0000088_pilon:768448..772508+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGATAATGCACTTCCATACCATAACACTAAACGTCCCATCATTAT
GGCAATGTTCAGTGGCCCTGGACCCGCCTGCGTCGGTCGACTTGGTCTTG
ACAATGGGCCTAAATATTCATTTGGTTTGAAACCTGGTCAGCGGGTAGAT
GCTTTCACTCCTGGTCCTGCTGCATACACAGTTCATGATAAGTCAACACG
GTTTGGTAGTGATGGTTCCCCTAAATACACACTTCACTCACGCACGAAAC
AAGGAAACTCCTTCACCACTCCGGGACCAgCTGCCTATTCAACAGAAAAA
GTAAAGATATTCAAGCAACCAACACCACCCAGTTATTCATTCGGATCAAG
AACTCGTTTCAATAAACGTGATGGGTCACCGGCACCTAATGCTTATACCG
TACCTCCCATTTTCGGCTCCAAAACGCCCACTAAACGTTCGCCACCCGCT
TATGTAATGACGGGTCGAGGGCGTGTGGGTGGATTCAGTGAAGACTTGAG
TAAGACACCTGGGCCGGGGACTTATAAAGTGAACGATCCAAATTCATGGA
AACATCGGGCGCCAAGCTACTCAATCAGTGGTCGATTTATGATGCCTGGT
GATTCAACACAAAAGCCTGGACCTGCGCATTACAGTCCTCATAAGCAAAG
ATCCGGAACTGGTCCATCTTTTGGTGTACGGCATTCAGAATATACCGCAC
CTGTTCTTTTCTCTACATGCTGAATGAGGGATAATGCACTTCCATACCAT
AACACTAAACGTCCCATCATTATGGCAATGTTCAGTGGCCCTGGACCCGC
CTGCGTCGGTCGACTTGGTCTTGACAATGGGCCTAAATATTCATTTGGTT
TGAAACCTGGTCAGCGGGTAGATGCTTTCACTCCTGGTCCTGCTGCATAC
ACAGTTCATGATAAGTCAACACGGTTTGGTAGTGATGGTTCCCCTAAATA
CACACTTCACTCACGCACGAAACAAGGAAACTCCTTCACCACTCCGGGAC
CAgCTGCCTATTCAACAGAAAAAGTAAAGATATTCAAGCAACCAACACCA
CCCAGTTATTCATTCGGATCAAGAACTCGTTTCAATAAACGTGATGGGTC
ACCGGCACCTAATGCTTATACCGTACCTCCCATTTTCGGCTCCAAAACGC
CCACTAAACGTTCGCCACCCGCTTATGTAATGACGGGTCGAGGGCGTGTG
GGTGGATTCAGTGAAGACTTGAGTAAGACACCTGGGCCGGGGACTTATAA
AGTGAACGATCCAAATTCATGGAAACATCGGGCGCCAAGCTACTCAATCA
GTGGTCGATTTATGATGCCTGGTGATTCAACACAAAAGCCTGGACCTGCG
CATTACAGTCCTCATAAGCAAAGATCCGGAACTGGTCCATCTTTTGGTGT
ACGGCATTCAGAATATACCGCACCTGTTCTTTTCTCTACATGCTGAATGA
GGGATAATGCACTTCCATACCATAACACTAAACGTCCCATCATTATGGCA
ATGTTCAGTGGCCCTGGACCCGCCTGCGTCGGTCGACTTGGTCTTGACAA
TGGGCCTAAATATTCATTTGGTTTGAAACCTGGTCAGCGGGTAGATGCTT
TCACTCCTGGTCCTGCTGCATACACAGTTCATGATAAGTCAACACGGTTT
GGTAGTGATGGTTCCCCTAAATACACACTTCACTCACGCACGAAACAAGG
AAACTCCTTCACCACTCCGGGACCAgCTGCCTATTCAACAGAAAAAGTAA
AGATATTCAAGCAACCAACACCACCCAGTTATTCATTCGGATCAAGAACT
CGTTTCAATAAACGTGATGGGTCACCGGCACCTAATGCTTATACCGTACC
TCCCATTTTCGGCTCCAAAACGCCCACTAAACGTTCGCCACCCGCTTATG
TAATGACGGGTCGAGGGCGTGTGGGTGGATTCAGTGAAGACTTGAGTAAG
ACACCTGGGCCGGGGACTTATAAAGTGAACGATCCAAATTCATGGAAACA
TCGGGCGCCAAGCTACTCAATCAGTGGTCGATTTATGATGCCTGGTGATT
CAACACAAAAGCCTGGACCTGCGCATTACAGTCCTCATAAGCAAAGATCC
GGAACTGGTCCATCTTTTGGTGTACGGCATTCAGAATATACCGCACCTGT
TCTTTTCTCTACATGCTGAATGAGGGATAATGCACTTCCATACCATAACA
CTAAACGTCCCATCATTATGGCAATGTTCAGTGGCCCTGGACCCGCCTGC
GTCGGTCGACTTGGTCTTGACAATGGGCCTAAATATTCATTTGGTTTGAA
ACCTGGTCAGCGGGTAGATGCTTTCACTCCTGGTCCTGCTGCATACACAG
TTCATGATAAGTCAACACGGTTTGGTAGTGATGGTTCCCCTAAATACACA
CTTCACTCACGCACGAAACAAGGAAACTCCTTCACCACTCCGGGACCAgC
TGCCTATTCAACAGAAAAAGTAAAGATATTCAAGCAACCAACACCACCCA
GTTATTCATTCGGATCAAGAACTCGTTTCAATAAACGTGATGGGTCACCG
GCACCTAATGCTTATACCGTACCTCCCATTTTCGGCTCCAAAACGCCCAC
TAAACGTTCGCCACCCGCTTATGTAATGACGGGTCGAGGGCGTGTGGGTG
GATTCAGTGAAGACTTGAGTAAGACACCTGGGCCGGGGACTTATAAAGTG
AACGATCCAAATTCATGGAAACATCGGGCGCCAAGCTACTCAATCAGTGG
TCGATTTATGATGCCTGGTGATTCAACACAAAAGCCTGGACCTGCGCATT
ACAGTCCTCATAAGCAAAGATCCGGAACTGGTCCATCTTTTGGTGTACGG
CATTCAGAATATACCGCACCTGTTCTTTTCTCTACATGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000088_pilon | genome | sc0000088_pilon:768448..772508 + |
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