|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:734151..741666+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11954.1.p1 ID=MSTRG.11954.1.p1|Name=MSTRG.11954.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7516bp|location=Sequence derived from alignment at sc0000088_pilon:734151..741666+ (Clytia hemisphaerica_ch_hm2_pilon)
cggctattaggtacccgagagtacttgtTTGAATGTGCATGAGTGGAACT
AAGTGTTCTCGTCAAAGTAGGTTGGCATCTTACTCTATGTTTAACATAAA
CAAATCCAACAATGATTTCTTTCTCtaacaacaatattttttttatcacc
gttttttggtttcaagtggattttttCAGATCATCGTTTGCGGTCTATGG
CCATCGTGAACAGGATACTTAGCAAAAATGTGTGTATATTCTGTTAATTT
TACAATTAGTGTTTGCTTAATCTGATTTCTGGTTTTGGATTTTCTTTAGT
GTTGTTACTTTCCAAGTTAGCAAAGCATGTTTTCGTTGCTTCGATTTGAA
AACGCTTGGCCAGCCTAAATTGACTTCGTTTACCATTGTTGATTCTTATC
TAGATACAAATATCTAACTTCTTTACCTTAAATGACCCGATTGACCCTTT
TTAGAAGCGTGTCCTTATTGGTATGCAGTGGTTTATAAGAGCTAGCAAAA
CGGGGTAGAGTAAAAAAGTATCTGACCGTCTGTTTATTTCTATCTTCTAA
TCCTCTCAtttttttAGAGACAAACAAACTAAAACTCGCCAGTCAACAAA
CATGAATACTTTCAATTTGTTTCTAATCCTATCAATGTCGGTGACCGCAA
CATTTTGTTTACCGACTACCAGCATCGTTAGCATAGACGACAATTGTCGT
CAAGAGTTCGTTCCAAAAACTATCCATATCAACGGCTGCCGAGATCGTCA
TTTCCCGAGATTCCCCGTATGCAAAGGATCTTGTTTCAGTAGTGAAGGCT
TGGAAGGAGTGCTTGTGCTTGATGATAACTACATGGCTTCAAGAAAGAAA
GACACTTGTGAATGCTGTGAACCTATTGCTCACAAGATTTTCAATGTTGA
ATTTTCTTGTCTGTTCAACCaaaaaaaaCTGGTTCCTATTCACGTGCCGA
CCACGTGTAAATGTACGGCTTGTAGGGCTGATGATTATGATATCGTGGAA
AAATCACCGCCAACTATGAAGCGAAAACGTAAATGGCGTCGTTATTAgat
tttttatcaactttttgacGATTGAGGGATGAAAGCATTATGGTTTAAAG
ACATAAATGGTGGTGAAAATCCGTGGTTCATATAGGAATAATACATCGAT
GGATATTCTGGTCAAATCTATACAGGAGCCTATATGTGCAATGAGCAGAT
TAACGGTTTTCTGCAGTGTATCTACACTCCATATGGATCGCCCCTTCACT
GTCACTTTCAAAACTAACTTAACTACAATTTTGAGACAATGTGCATGGGA
TCTTCAATTATGTTTAAATCGCAAATTCAGAGGAATCTTTTCAAAgttga
agaaaacaaaaaatgtttggtGGAGATGTTGTACAGGAACTTGTAATGTC
GTAtttatgaaaacatttttgaacattAAAAATATGATTGGTGACATATA
GCGGAAAACCTAACGGCCCATCGACAGTTGGTGGAACTACCTTGAAGGAC
AATATAACGCTGAAAGTAAAAAACAACCGGATCAAAGAGTTGCCCGTTAT
AGACAATCATTTGTTTCAAACAACGCATGTATCTGAATTCTGATTTTCGT
TGAAGAAGGACTTTGGATTATTTCCCTTAAGGTACGTCATGCTAATGAAT
TGAGTTAAAGAATtttcatttctaaattttaataatttaatcGTTTTATG
AAATCCAAAAGAATATAGTTATCAAAATTTGtttgtaaattttaaaagtt
aatgACGATAAAGAAAGTACAAGTATCACTTTCAATGAATATACAGTAGT
TGTAATACAAAAATAGGCAGAGGTATCTTTATAAAGGTCTTTATGGTGTC
TCAGCTTTATTCATCTGGTAAACTTTATTCATCGAATTAGggagacattt
tgaaaaactcatCTGCTACGCGAATGTCCCCTTATCTCTAATAATGTCTC
TCTCTTATGTCCCCCCTCTACTGACTGCAATTTTGAGATTTGACTGAGAT
TCGATTATATTCGACTGAAATTTGATCTCTGTCGATTGTGTTCAATCGTG
TTTAAAGACGGTCGAAATATACCCGTGTTTTTTCAACGAATTTTTGCATT
GCATTTTTCCTGTGACGGGGGAGGTTAGTTTTTCATTTGTCTAGATACTG
AAAGTAACAATTGGCATTAAGGGACTCCTTATACCCTCACAGACACgtat
gtttttttggaaaaacactTGAACTTATTTATAAAGTCCAACTTTTTCAA
AGGGTCTTTCTGATGGAAAATGACGGCTAGAATCAAAGATGAGAAAGTGG
AACAATGTACTTAAAGCCAGGAAGGTAAACACCTTATTCATTCTAACAAT
CCAGGAAATATCAAAGAGATAATCCAAATTACAATTTTCCACTTTCTGAT
CTTTTATTTGGAAAGACGGGAAACTTGTAAGAATTAAATATTGGCATTTT
ATAATACAGGAAAcaccaaaaaatgaaaaaaaaaaaagattgcttTTTTC
CACATTCTTTATACTCTACCCGTCAGGCCGttcaacgttgtttcaatgtt
cccATATAACATTTTATGAATGTTCTGTGTCAACTGACCATTTCTGGCCg
atgtaaaaattttcttcaggCATGTAAAAGGTTTTGACGATCTGAAAAAT
GTTTAACATCATAAGTGTGTTTACAGTACAATGGAATTTAGTCTGAGTGC
GCCAcaaattttacagtaagtgGTCTGGGGACATCCTCATTTTCGGTTCC
AACCGTTGAGGCAGTGATACAGTATATGACCCAgacaagaaagttttaaa
taaaatcttCATAATCTATCACTGCGATGTGAATTATTGAAATCCCTAAA
TGGAACTTAATTCTGTCTAATCACAAGGTTCTactcgcaaaaaaaaatta
ccaccAACCTTGTCACTCATCAGTGTCACCAAGGATTTAAATTAGGGAAA
GGGATGACccaaaaaaactgaataatctTTAAgtaacatccctgtctcat
tgaCCTGGTGAGATTCTTCTAGTTATTGGGAATAAAATGGTGTTGAAATT
CAACGGCGGGGGAAGTCACttgagcttttgaatttttagattcCAGGGTT
TCCAGTGAAAAAGGGTCTCACTCGGGTTTGTTATAGGGGTTTTATCAGTT
AAATTTGTACTGGTTAATTTTGAATTGTCTTCGAATTTTGACTAGTAGTT
AATGACCCAATGTAAAGTGCCCTGAGAGATTGATGGTCGGTATAGCATTA
ATAGATTTATGTATCATAGGCTAAAATTTTAGCCGAATGACTGATGGCCC
ATAAATCTTACAACTGTTACATTATCTTGACAGTTAGAACAGGATTAGTT
TAATTGATATTTAATGGGCATTATCTTAACCAGTTAGATTTAAGCGACAT
AATTTTGATTATTATACGCATACAcatcattgtttaaaaatagGATAGAT
AACGGTTTGAATACTTGCTAACCAGAATCAAAGCTCCTATAGTACATTCT
TAAACCGCAACTGTGATAAACTATCGATTTAGGTAATTGTAAATTTCAGT
CAGATCTACCATTAGAAACTATTAATCGGTGCTATAAAGTGTTTTTTGAT
TGATGTCAATTTAATTGAGACCTGGAACACtacgtttttgaaaaaaaaca
aaaaagcttaGTCGAGCCTCAAGAGGTCTAAATTCATGGTATAATTTTAG
GGATTTTTCCACGTGCCTGGAAGTGATGCAATACTCTGCTTCAGATTTTG
AAGGATAAGTGGCTGACAACTATCTTTCATCTTCTGAGTCATGGAGtcaa
aaaaactaaataaactCGTCAACAAACATGAATACTCATAATCTGCTTCT
AATCCTCTCAATGTCGGTGACCGCAACATTTTGTTTACCGACTACCAGCA
TCGTTAGCATAGACGACAATTGTCGTCAAGAGTTCGTTCCAAAAACTATC
CATATCAACGGCTGCCGAGATCGTCATTTCCCGAGATTCCCCGTATGCAA
AGGATCTTGTTTCAGTAGTGAAGGCTTGGAAGGAGTGCTTGTGCTTGATG
ATAACTACATGGCTACAAGAAAGAAAGACACTTGTGAATGCTGTGAACCA
ATTgctcacaaaattttcaatgttgaaTTTTCTTGTCTGTTCAACCaaaa
aaaTCTGGTCCCTATTCACGTGCCGACCACGTGTAAATGTACGGCTTGTA
GGGCTGATGATTATGATATTGTGGGAAAATCACTGCCAACTATGAAGCGA
AAACGTAAATGGCGTCGTTATTAGATTTTGAAGACGCTTTTGGAGTTTCT
TTTGGATCTGAATTTATCAACCTTTTGACGATTGAGGGATGAAAGTATTA
TGGTTTAAAGACATAAATGGTGGTGAAAATCCGTGGTTCATATAGGAATA
ATAGATCGATGGAGATTCTAGTCAAATCTATACGGGGACCTATATGCGTG
CAATGATCAGATTAACGGTTTTCTGCAGTGTGGCTGCGTCCTATATGGAT
CGTACCCCTTCCACTGTCGCTTTCAAAACTAACTAAACTAAAATTTTGAG
ACAATGTGCATGGGATTTTCAACCATGTCTTCATCCCAAAGtcggagaat
tttttttttcaaagttttgaagaaaacaaaaaatgtttggtGGATATGTT
GTACAGGAACTTGCAATGTCGTATttatgaacatatttttgtacATTAGA
AGTATGATATTGATAACATATAATGGAAAACCTAACGACCCATTGACAAT
TGCTGGAACTACCTTGAAGGACAATATTACGTTACAAGTCAAAAACAACC
GGATCAAAGGGTTTCCCATTATAGGAAATCATTTGTTTCAAACAACGTAT
GTATCTGAATTCTGATTTTCGGATTTTCTTTAAAGAAGGACCTTAGAGTA
TTGTTTGTGCTGCGAACGTGTTGTATTGCACAcccagggggtactaggtt
tgcgaggtgacgggtatgtccgagccgaaaatcgaaaatcgaccctttga
aagactttttcctaaattttgatccattttttccaaattttggtttgatt
ttcatcgcgaaatcgtgacccttttagagagaaatttttgattttcgtga
ttttgagactaacttttgaatttgtaccccttttgagagacttttgagga
atgagaaaaggtacccttatggctcacacatacccggcacccattttgcc
taagtaccccccccccgggattgcACATAACCTTAATTGACTgttgcaaa
aatatttcaagaagtAGTTTCTCTTTACAATCAAAAGAGAGAAGCTCTTT
GAATTTCTTTGCTCTAGACCATGCGAAATTAAAGGTCAACTAGTTTTTAG
TCTGGAGTTATACATTCTTATACACGTATACGCAAAAATAAGACTGACTC
TAATACATTTGTAATGGCTTCAATGATTTATCTACGTCTTTGTGCGGTCG
GGAATAATGCGGGACATTTTTTAACACAAGACACcacaaatcaaaattca
attatcatttGGCTATAGTTTCTAATTCCTTTCCACGCagaattgaaatt
tctttttttccggAATAAATCAAAGGAGAAAGCTTTCGGATGGATgtgat
attttttgacttttttccgGGAAATATTCCGTAGGTACCTTGAAATATTT
ACCATCACTTAACTTTTCAATACCGAAGACAAAAGTATCCCTccacctta
agggaactaattttctcgaaaataaaatagttcccttaaggtacgtCATG
CTAATGAATTGAGTTAAAGAATtttcatttctaaattttaataatttaat
cGTTTTATAAAATCCAAAAGAATATAGTTATCAAAATTTGtttgtaaatt
ttaaaagttaatgACGATAAAGAAAGTACAAGTATCACTTTCAATGAATA
TACAGtagttttcatgaaaaataggcAGAGGTATCTTTATAAAGGTCTTT
ATGGTGTCTCAGCTTTATTCATCTGGTAAACTTTGTTCATTGAATAaggg
agaaattttgaaaaactcatCTGCTACTCGAATGTCCccttatggagact
ctactgactgcaattttgagatttgactgagattcgattatgttcgactG
AAATTTGATCTctttcgattgtgttcaatcaTGTTTAAAGACGCTCGAAA
TTTAGCCGTGtttttcaacgaatttttgcattgcatttttcctgtgacgg
ggaggttattttttcatttgtctaGATACTGAAAGTAACGATTGGCATTA
AGGGACTCCTCATAGCCTCACAGACACgtatgtttttttggaaaaacact
TGAACTTATTTCGTCTAATAGCTAGCAGTTGTATATAAAGTCCAACTTTT
TCAAAGGGTCTTTCTGATGGAAAGTGACGGCTAGAATCAAAGATGAGAAA
GTGGAACAATGTACTTAAAGCCAGGAAGGTAAACACCTTTTTCATTCTAA
CAATCCAGGAAATATCAAAGAGATAATCCTAATTACAATTTTCCACTTTC
TGATCTTTTATTTGGAAAGACGGGAATCTTGTAAGAATTAAATATCGGCA
TTTTATAATACAGGAAAcaccaaaaaatgaagaaaaaaaagattactTTT
TTCCACATTCTTTAAACTCTACCCGTCAGGTTGttcaacgttgtttcaat
gttcccATATAACATTACATGAATGTCCTGTGTCAACTGGCcatttctga
ctgatgtaaaaaaaaatttcaggcgTGTAAAAGGCAGTGCAAAGTGTAAA
GTTCCAGTACAATGGAATTTAGTCTGAGTGCACCACAAATTTTACAGTAA
GAGGTCTGGGGACCCTCATTTTCGGTTCCAACCGTTGAGGCAGTGATACA
GTATATGACCcacataaaaagttttaaataaaatcttCATAACCTATCAT
TGTGATGTGAATTAGTTATGATTATGATATAGGGGGCCTATATGTGCAAT
GAGCAGATTAACGGTTGGAGATGTTGTACAGGAACTTGTAATGTCGTATt
tatgaacatatttttgtacATTGAAAGTATAATTGATGACATATAACGGA
AAACCTAACGACCCATTGACAATTGCTGGAACTACCTTGAAGAACAATAT
AATGCTGAAAGTCAAAAACAACCGGATCAAAGGTTGCCCATTATAGGAAA
TCATTTGTTTCAAACAACATATGTATCTGAATACTGATTTTCGTTGAAGA
AGCACTATGGATTagagtatttttttgtgatgtGAACGTGTTGCATTGCA
CGTAACTTTAAACTGACTGTTGCAAAAACATTTACAATCAAAAGAGAAAA
TCTCTTTGAAATTCTTAGCTCTAGACCATGGGAAATTAAAGATCAACTAG
TTTTTAGTCTGGAGTAGTCAAGTTAAACAATCTTATACATGTAAACGTAA
GAATAAGACTGACTTTATACATCTGATGATTTCAATAATTTATCTATGTA
CGTCTTTGTGCGGTCGGCAATAATGTGGGACATTTTTAACACAAGACACC
ACAAATCAAAGTTCAA Coding sequence (CDS) from alignment at sc0000088_pilon:734151..741666+ >MSTRG.11954.1.p1 ID=MSTRG.11954.1.p1|Name=MSTRG.11954.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=447bp|location=Sequence derived from alignment at sc0000088_pilon:734151..741666+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATACTTTCAATTTGTTTCTAATCCTATCAATGTCGGTGACCGCAAC
ATTTTGTTTACCGACTACCAGCATCGTTAGCATAGACGACAATTGTCGTC
AAGAGTTCGTTCCAAAAACTATCCATATCAACGGCTGCCGAGATCGTCAT
TTCCCGAGATTCCCCGTATGCAAAGGATCTTGTTTCAGTAGTGAAGGCTT
GGAAGGAGTGCTTGTGCTTGATGATAACTACATGGCTTCAAGAAAGAAAG
ACACTTGTGAATGCTGTGAACCTATTGCTCACAAGATTTTCAATGTTGAA
TTTTCTTGTCTGTTCAACCaaaaaaaaCTGGTTCCTATTCACGTGCCGAC
CACGTGTAAATGTACGGCTTGTAGGGCTGATGATTATGATATCGTGGAAA
AATCACCGCCAACTATGAAGCGAAAACGTAAATGGCGTCGTTATTAg
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:734151..741666 + |
|
