MSTRG.11929.2.p1 (mRNA) -

Overview
NameMSTRG.11929.2.p1
Unique NameMSTRG.11929.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000088_pilon:428959..430115+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11929.2.p1 ID=MSTRG.11929.2.p1|Name=MSTRG.11929.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1157bp|location=Sequence derived from alignment at sc0000088_pilon:428959..430115+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCAAAAAATGTCGATACTTGATGGCATTCCAAAGGTAGAGATCGtggaa
gaattgaaaaaacGTGGCGTCCAAGTCAACAAAGACCAAAATAAAGACGT
GGTTTTGAAACAGCTCGAAGATATTTTCGCAGGTAAACACGATGTTTCAA
TCCGAAAATGTTGAagcaaaaacatgaaaacagcacaaaacgttgttttt
aATTCTCGTCTCGGTTTCTTGTTTAGGAGTCCAACACCTTCCAGCATTAC
TGTTCGAATCGGGAAAGACAAGCCTTGAAAAGGTCGGTTTGGAATCGTAC
GAAGTACTTGCATGCGACCCTTTACACACCTTCAAAGGTTTGACGACCAA
TCTTTACCAAGAGATCCCTCGTCACCTTCAGggcgaagaaaaaaatcttt
ttaaggaCTCGGCGCGAGCATCCTTTCATGGCAAAGAGGCAAAAAATGGT
GGAGACTACAGGCGAAGCCTGGTGGACCTGACGATTTACTTGGATGGAGA
AATGACTGATGCGTACGTCAAACTCATGAGGCAGCTCGCTGAATTACAAG
AAATTGCATATTCCGGTGAAGAAAAGCGTACAGCCAAGTCGATTTTACGC
TTCCACAACGTGTCATTCTTGCACGCAGACTTGATGATTGAGCTTTTCGA
AAAGCAGAAATCCATGAGCCGAAGAAAACTGTTTGGACAGTACAACCATT
CGCTGACCAGTCATGCGCCAATCCAATATCGGATTCTGGATTTGGTTTCG
GCAAATACTGAGCAAGAGGAGGCTGCATTCAATTTCATGAAAGAAGTCAG
TAAACACGCTTCCAATCATCATCCCGATAATATACTGCTGACCTGCTTTC
TTCGTATCCAAATCCGAGAAGACTGGCAACGTCACTTGGGCATCCTGAAA
AAGGAAACAAGAAATGCTATTAGCAAACACGGCGATTTGTTAACATCGGA
GAGATCGAATACTTTCGTTCCATTCAAACTGATGCgactaaaaccgcgaa
aatggCAAAGCCAGCTAGAGAGGATATGTGATTATTTATTAATTGATGGA
ATTTGGGAGGAGATTCAAAATGGGATAATATTTCACGACCTTGACGAAAC
CATCAACTACCCTCCCCCTCACCATTTTCGTAGCTACACTATATCACAAG
AACGCCA

Coding sequence (CDS) from alignment at sc0000088_pilon:428959..430115+

>MSTRG.11929.2.p1 ID=MSTRG.11929.2.p1|Name=MSTRG.11929.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2118bp|location=Sequence derived from alignment at sc0000088_pilon:428959..430115+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAAATGTCGATACTTGATGGCATTCCAAAGGTAGAGATCGtggaaga
attgaaaaaacGTGGCGTCCAAGTCAACAAAGACCAAAATAAAGACGTGG
TTTTGAAACAGCTCGAAGATATTTTCGCAGGAGTCCAACACCTTCCAGCA
TTACTGTTCGAATCGGGAAAGACAAGCCTTGAAAAGGTCGGTTTGGAATC
GTACGAAGTACTTGCATGCGACCCTTTACACACCTTCAAAGGTTTGACGA
CCAATCTTTACCAAGAGATCCCTCGTCACCTTCAGggcgaagaaaaaaat
ctttttaaggaCTCGGCGCGAGCATCCTTTCATGGCAAAGAGGCAAAAAA
TGGTGGAGACTACAGGCGAAGCCTGGTGGACCTGACGATTTACTTGGATG
GAGAAATGACTGATGCGTACGTCAAACTCATGAGGCAGCTCGCTGAATTA
CAAGAAATTGCATATTCCGGTGAAGAAAAGCGTACAGCCAAGTCGATTTT
ACGCTTCCACAACGTGTCATTCTTGCACGCAGACTTGATGATTGAGCTTT
TCGAAAAGCAGAAATCCATGAGCCGAAGAAAACTGTTTGGACAGTACAAC
CATTCGCTGACCAGTCATGCGCCAATCCAATATCGGATTCTGGATTTGGT
TTCGGCAAATACTGAGCAAGAGGAGGCTGCATTCAATTTCATGAAAGAAG
TCAGTAAACACGCTTCCAATCATCATCCCGATAATATACTGCTGACCTGC
TTTCTTCGTATCCAAATCCGAGAAGACTGGCAACGTCACTTGGGCATCCT
GAAAAAGGAAACAAGAAATGCTATTAGCAAACACGGCGATTTGTTAACAT
CGGAGAGATCGAATACTTTCGTTCCATTCAAACTGATGCgactaaaaccg
cgaaaatggCAAAGCCAGCTAGAGAGGATATGTGATTATTTATTAATTGA
TGGAATTTGGGAGGAGATTCAAAATGGGATAATATTTCACGACCTTGACG
AAACCATCAACTACCCTCCCCCTCACCATTTTCGTAGCTACACTATATCA
CAAGAACGCCAAAAAATGTCGATACTTGATGGCATTCCAAAGGTAGAGAT
CGtggaagaattgaaaaaacGTGGCGTCCAAGTCAACAAAGACCAAAATA
AAGACGTGGTTTTGAAACAGCTCGAAGATATTTTCGCAGGAGTCCAACAC
CTTCCAGCATTACTGTTCGAATCGGGAAAGACAAGCCTTGAAAAGGTCGG
TTTGGAATCGTACGAAGTACTTGCATGCGACCCTTTACACACCTTCAAAG
GTTTGACGACCAATCTTTACCAAGAGATCCCTCGTCACCTTCAGggcgaa
gaaaaaaatctttttaaggaCTCGGCGCGAGCATCCTTTCATGGCAAAGA
GGCAAAAAATGGTGGAGACTACAGGCGAAGCCTGGTGGACCTGACGATTT
ACTTGGATGGAGAAATGACTGATGCGTACGTCAAACTCATGAGGCAGCTC
GCTGAATTACAAGAAATTGCATATTCCGGTGAAGAAAAGCGTACAGCCAA
GTCGATTTTACGCTTCCACAACGTGTCATTCTTGCACGCAGACTTGATGA
TTGAGCTTTTCGAAAAGCAGAAATCCATGAGCCGAAGAAAACTGTTTGGA
CAGTACAACCATTCGCTGACCAGTCATGCGCCAATCCAATATCGGATTCT
GGATTTGGTTTCGGCAAATACTGAGCAAGAGGAGGCTGCATTCAATTTCA
TGAAAGAAGTCAGTAAACACGCTTCCAATCATCATCCCGATAATATACTG
CTGACCTGCTTTCTTCGTATCCAAATCCGAGAAGACTGGCAACGTCACTT
GGGCATCCTGAAAAAGGAAACAAGAAATGCTATTAGCAAACACGGCGATT
TGTTAACATCGGAGAGATCGAATACTTTCGTTCCATTCAAACTGATGCga
ctaaaaccgcgaaaatggCAAAGCCAGCTAGAGAGGATATGTGATTATTT
ATTAATTGATGGAATTTGGGAGGAGATTCAAAATGGGATAATATTTCACG
ACCTTGACGAAACCATCAACTACCCTCCCCCTCACCATTTTCGTAGCTAC
ACTATATCACAAGAACGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11929MSTRG.11929Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11929.2.p1.exon1MSTRG.11929.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11929.2.p1.exon2MSTRG.11929.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11929.2.p1MSTRG.11929.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000088_pilongenomesc0000088_pilon:428959..430115 +