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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:361780..364357- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11925.1.p1 ID=MSTRG.11925.1.p1|Name=MSTRG.11925.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2578bp|location=Sequence derived from alignment at sc0000088_pilon:361780..364357- (Clytia hemisphaerica_ch_hm2_pilon)
GCTAGCGATGTTCCGATTTTTAAAAATGGCGGTTTCAGTACATAAACACA
AGGAAAACTGGCTGACTGACTCGAAGTATCTTGTCTGAAATTCAAACTGT
TATCATCAAATCATTGCTCACAACTGTTATTTTACAACAACTATACAACT
GTTATTTTTATAACAACATATACAACTGTTATTTTTATAACAACATAAAC
CAAAACTCAACAATGGCTCATAGCACATTGGACATAGAGAACCAGCAGCC
AGAGGATTATGAGCTGGAAACTGAAGATTTTGAAGAACTCAAAATCGTTG
GTGAGTCAATTTAAATATAACTGAATTTAGACTATGCATGAGCTTCACTA
CTTCAGTCAGCTTACCTTCTTCTGTCTGCAAGTGCTCATTTAGCTGAGTG
CAAAGCCCCTCTTCTGGACTCTGGTCTGAATGATCTCTGATTCTGATGTT
ATGATCTGATTCTTTTCTCAGGGTAAGGTTTGTTTGACTGATGTACATAA
CCCTAACACTACTTTTCTCTCTTTTCTCTACAGATGCTGAGTCTATCAAG
TTGACTGAAGTAGATATTGACGATCCACACGTTCACGTTGACATGTCAGT
ATTATCAAAATACAAGGTTGAACATTTAAAAAGGTGGCTGCTCTATCGTG
GTGACAAACTCCACAACATCGAAACATTAAAAAGTGCCCAAGTCAGAGTT
TTGGATTATTTTGAAAACAATACGCATGGCATAATTATAGATCCAACAAC
GGACAAAAAATGGATCAGAAAGAAAGCAGATTCGATGGGAGTGATATTGA
GCCCCATTTGGAAGGTTAAAACTTTACCATCTACACCGTCTATACTTGCT
GATCAAAAGCTAAACGCAGCTGACACAAATATGGATGGATGGTCCAAATC
TCTTGATGGTATGCCAAATTTTACGGTTGACAATATCAAGGCGTATAATG
AAAAAATCACCAAACTATTTTGTCAAAAATCGACAGCAATCAAAAAACAT
TTCATTAGAGGAACACAATTTTCAGAGGAGAGGTTCATTGACTTACCCTC
TACATTTTCCAAGTCAGACGAGGATTTATTTTGTGTAAAAACTATAATTG
GCGCTAGCTTGAAAAAAGACTGTCGCTGGGCTGTTGTCGCTCTGTCAAAA
ACAGATGGGGAGATAAAATTTGCTAGTTGTGCCTGTGTTGCTGGAAAAGC
TGGGACATGTTCACATAGCTATGCATTAATGAAAACAATTTTGAAATGGG
TTATTGATCGCCGCACCATAATCCCTGAGGAGAAAGCTTGCACTTCGCAA
CGCTGTGCTTGGAACCAGGTCCAAATGAGGAAACATGAGGAAAATATTAA
TCGCATGCCACTTAGTGAACTGACATTTAAATCACCACCATGCTTAAAGC
GTAAGAGATCTGTCAATAAGGATGACAAGGAGGAGCCAGGACCATCCAAA
GAATCAAAAGGGATAACTTCATCTCTGTACGAATCTCGAAAACACCCTGC
TGCATGTCCACCAAATCTTGCAGTCCTCTCTAACCTATTAGGTGGAATAA
TCGACATTCCTGGTCCAAAACTGATTAATGCCAGCCCGGAATATTACCGC
AAAACGACCTTTGGTGATGCACCATCAGGATCAATGTTGAGTTACCAGTG
CCCGTTGATGCCACCTAATTTTAAGGTGTATTGTAGCATTGAACGTGAAC
CTGTTGACTGTGAGCCAAAATTTTTACTACCCAACATTTCCTTTTAAAGA
AATAAATAACAAAATGGCAAGTTATGAAGAGGACATACATATTATTGAAA
TAAAGAAAATAACTCTTTTGGAAAATTTAAAGATCAGTGCGAGAGAGAGT
GAATCAATCGAAGAGGATACCAGAGAGCAAGCCAGTAATCCCAAATGGTT
CGAATATCGAAAAAATCGTTTTACAGCGTCGTTGTGCAATCGCCTTACAG
GGAGAAATGCACCGAAAACCCCCAGAGGTTTGACAACTCTGGCTAAAAAT
TTTGTCCATCCAAAGGAAGTGAACAAAATTGTAAAACTTAAGATGGACTA
CGGGAAATTTTATGAACCGATAGCCATAAGACATTATGAAACTTATATGA
AACTTTCTGGTTTCAAAATCAACGTCGAGGCTTCTGGCTTAGTGTTGGAT
GAGACCAATTACATTCTAGGTGCAACACCTGATGGTAAAGTCACTTGTGA
TGGTGAAATGGGGATTTTGGAAGTAAAATGTTCTGACCAGTACAAAGATA
TTGACCCAAAAGCAATATGTGTAATTTCGCCAAACCCCATGGTGATAAAA
GATAAAGACGGTATTTTCCGAATTAGTAAGGAACATTCTTACTATAACCA
AGTACAGATGCAATTGGCACTTACTTGTCAGACTTGGTGTGACTTTGTTT
TTTATATACATCTCAAGGACTGATTATTGACAGGGTGAAATTTGATCCCC
TGTACTGGGAAGTATTACAAAAAAAATTTTAGATTTTTATTTTACATATA
TGTTGCCTCAAATTGTAGATTCATAGATATTATTTATTATTTTTATTTAT
TTTTTTACAGGTTTTTTTGTCTTTTGGG Coding sequence (CDS) from alignment at sc0000088_pilon:361780..364357- >MSTRG.11925.1.p1 ID=MSTRG.11925.1.p1|Name=MSTRG.11925.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2604bp|location=Sequence derived from alignment at sc0000088_pilon:361780..364357- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGAGTCTATCAAGTTGACTGAAGTAGATATTGACGATCCACACGTT
CACGTTGACATGTCAGTATTATCAAAATACAAGGTTGAACATTTAAAAAG
GTGGCTGCTCTATCGTGGTGACAAACTCCACAACATCGAAACATTAAAAA
GTGCCCAAGTCAGAGTTTTGGATTATTTTGAAAACAATACGCATGGCATA
ATTATAGATCCAACAACGGACAAAAAATGGATCAGAAAGAAAGCAGATTC
GATGGGAGTGATATTGAGCCCCATTTGGAAGGTTAAAACTTTACCATCTA
CACCGTCTATACTTGCTGATCAAAAGCTAAACGCAGCTGACACAAATATG
GATGGATGGTCCAAATCTCTTGATGGTATGCCAAATTTTACGGTTGACAA
TATCAAGGCGTATAATGAAAAAATCACCAAACTATTTTGTCAAAAATCGA
CAGCAATCAAAAAACATTTCATTAGAGGAACACAATTTTCAGAGGAGAGG
TTCATTGACTTACCCTCTACATTTTCCAAGTCAGACGAGGATTTATTTTG
TGTAAAAACTATAATTGGCGCTAGCTTGAAAAAAGACTGTCGCTGGGCTG
TTGTCGCTCTGTCAAAAACAGATGGGGAGATAAAATTTGCTAGTTGTGCC
TGTGTTGCTGGAAAAGCTGGGACATGTTCACATAGCTATGCATTAATGAA
AACAATTTTGAAATGGGTTATTGATCGCCGCACCATAATCCCTGAGGAGA
AAGCTTGCACTTCGCAACGCTGTGCTTGGAACCAGGTCCAAATGAGGAAA
CATGAGGAAAATATTAATCGCATGCCACTTAGTGAACTGACATTTAAATC
ACCACCATGCTTAAAGCGTAAGAGATCTGTCAATAAGGATGACAAGGAGG
AGCCAGGACCATCCAAAGAATCAAAAGGGATAACTTCATCTCTGTACGAA
TCTCGAAAACACCCTGCTGCATGTCCACCAAATCTTGCAGTCCTCTCTAA
CCTATTAGGTGGAATAATCGACATTCCTGGTCCAAAACTGATTAATGCCA
GCCCGGAATATTACCGCAAAACGACCTTTGGTGATGCACCATCAGGATCA
ATGTTGAGTTACCAGTGCCCGTTGATGCCACCTAATTTTAAGGTGTATTG
TAGCATTGAACGTGAACCTGTTGACTGTGAGCCAAAATTTTTACTACCCA
ACATTTCCTTTTAAATGGCTCATAGCACATTGGACATAGAGAACCAGCAG
CCAGAGGATTATGAGCTGGAAACTGAAGATTTTGAAGAACTCAAAATCGT
TGATGCTGAGTCTATCAAGTTGACTGAAGTAGATATTGACGATCCACACG
TTCACGTTGACATGTCAGTATTATCAAAATACAAGGTTGAACATTTAAAA
AGGTGGCTGCTCTATCGTGGTGACAAACTCCACAACATCGAAACATTAAA
AAGTGCCCAAGTCAGAGTTTTGGATTATTTTGAAAACAATACGCATGGCA
TAATTATAGATCCAACAACGGACAAAAAATGGATCAGAAAGAAAGCAGAT
TCGATGGGAGTGATATTGAGCCCCATTTGGAAGGTTAAAACTTTACCATC
TACACCGTCTATACTTGCTGATCAAAAGCTAAACGCAGCTGACACAAATA
TGGATGGATGGTCCAAATCTCTTGATGGTATGCCAAATTTTACGGTTGAC
AATATCAAGGCGTATAATGAAAAAATCACCAAACTATTTTGTCAAAAATC
GACAGCAATCAAAAAACATTTCATTAGAGGAACACAATTTTCAGAGGAGA
GGTTCATTGACTTACCCTCTACATTTTCCAAGTCAGACGAGGATTTATTT
TGTGTAAAAACTATAATTGGCGCTAGCTTGAAAAAAGACTGTCGCTGGGC
TGTTGTCGCTCTGTCAAAAACAGATGGGGAGATAAAATTTGCTAGTTGTG
CCTGTGTTGCTGGAAAAGCTGGGACATGTTCACATAGCTATGCATTAATG
AAAACAATTTTGAAATGGGTTATTGATCGCCGCACCATAATCCCTGAGGA
GAAAGCTTGCACTTCGCAACGCTGTGCTTGGAACCAGGTCCAAATGAGGA
AACATGAGGAAAATATTAATCGCATGCCACTTAGTGAACTGACATTTAAA
TCACCACCATGCTTAAAGCGTAAGAGATCTGTCAATAAGGATGACAAGGA
GGAGCCAGGACCATCCAAAGAATCAAAAGGGATAACTTCATCTCTGTACG
AATCTCGAAAACACCCTGCTGCATGTCCACCAAATCTTGCAGTCCTCTCT
AACCTATTAGGTGGAATAATCGACATTCCTGGTCCAAAACTGATTAATGC
CAGCCCGGAATATTACCGCAAAACGACCTTTGGTGATGCACCATCAGGAT
CAATGTTGAGTTACCAGTGCCCGTTGATGCCACCTAATTTTAAGGTGTAT
TGTAGCATTGAACGTGAACCTGTTGACTGTGAGCCAAAATTTTTACTACC
CAACATTTCCTTTTAAATGGCTCATAGCACATTGGACATAGAGAACCAGC
AGCCAGAGGATTATGAGCTGGAAACTGAAGATTTTGAAGAACTCAAAATC
GTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:361780..364357 - |
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