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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:279427..289060- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11918.7.p1 ID=MSTRG.11918.7.p1|Name=MSTRG.11918.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9634bp|location=Sequence derived from alignment at sc0000088_pilon:279427..289060- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTAGTCTGTGTTTTCTTTGAGAAGTATACAAGTTTTTATATAAGAAAT
TCTTGCATATCAAAAGATTCACTGTGAATGTACTATATCCAGGAATGCAA
AAAGTTTTTGAATGTTCTTGATTTTTACTGTTTGAATGTTAGAGCTTCAC
TTCAATAGGTAACATCTTCGATGGATATTTAGCCAAAAAGAAATATTTCT
GCTAATTCAACAGCAAGACTTAACTTAAATTTGCGTCCCTATGAAAGCGT
TTGTATTCATCAAGAAATAATATATTTAAAAGAATTTGAATCATTCTGTT
TGGCCTGTTAACAAGATGTTTGTTTGAAAGGGGAAGTTGATGATAGTCAA
TGATGATGATGACGAGATCTCAATCACTTACGCAAAAAAATTGAAATTAT
GCGAATGGATGATTACGGTTAGTTTGGTATTCAAAAATGATGAATTGTTT
TATGCTTTAAATTTGACTGAGATGAAAGGTTGATAAATGATTGGCTGAAA
GAAAAGTAAGATCGTTATTTAGTATATGTACACGTTTTTTATTTGATAAG
GAACCTTAACTTTGCTCTGAGCCTGGCGTTCCTTATTTTTACAGAGAATT
TCAGTCTCAAAGTTCCTTATCGAGTTCCTTACTACATAGGAAATTTTGAA
CTTTTTGCCCCTTGAAAGATCAAAATTTGGTCAAATTAGTCCCAATAAGG
TACATTATTTTCAAATCCACTTATTCTCAGCCTGAGCAGTTCCTTAACAA
TTCCTTATTTTTTGAACGATTTTCAGCCTCGAGTTCCTTATAAACGTGTT
CCTTATAAAAAAAAAAACGTGTATTGGCTTTATCGAGAAATTCGAATTTT
CAAAGGTTGTTTAGTACTTTCTTTAGTGTGTAAATTGAAACTATCTTCAA
ACTATCTTCAAACTCAACCCGCCGCAAACACTCGAAACTCGAATATCTCC
GTAACTCAAATGATTTTTCTGGTCTTAAGTCATTATCTTTTGTTTAATTT
CCCTTTTTGTGATTCTAACCCTCCGTATCTCGTACAGAGTCCCCTTCTGC
TCGAATTATGGAGAGACGACTTCAGATGACAATTTTGGTTCAACAACTTC
CTCAGCAGACCTTTTCAGTGCAAGCCAAGGAAATTCTGTCGAATTTGCAG
CGAAGTATGAAAACTGTAGAAAATTTTTTTCTCAAGCGTAATACTTTGAT
TCGACCATTTTTTCTTCAAGATGTCTCATTCTAAAGAACTGAAATGGATG
TTCGAACTTTTGAATTCCTCACATTTTACCGACGTAATTTCATGAAGATA
TTACATCACAACGTATACAATAGTCATGCTCTACTTATACGCATACCTAT
AATATTTGTCAACGGCCATCATGCTTCTAAACTTATCTCCACGAGCTAGA
TCATTATCTGAAAATGAGTGACGTCATTTATCTGGTCAGAATACCATAAA
ACACGAATTTCTTCGAGAATGGGAACGATTCGGTGCTAACTAGTTTTGAA
TGTCGAGTTATTTTGCTGCAATGGTATTATCAAGGTGTTTGTAGTCTTTA
ACAAAGTTGTTTTGATGAATATATATATATGGTGAAGATCAGAGATCTGA
CCTCAAGGAGAGAAAGTGTTGAAAATACTAAATAAGATAAAGATGAAACA
TAAAAAGGGACTAATATTTTTATAATTATACGGTGAAGATCAGAGATCTG
AGCTCAAGGGAAAAGAGTGTTGAAAGCGCTCAACAAAATAAAAATGAAAC
ATAAAAATAGAGGGACTAATAATATTTTTATGATTATACAGTTTTTTTTA
GATAGCATTTTGTACATGTAGGTCTTCCTCTGGACTTTATTTCCAAAATA
TTTCGAACTTTTTCTTCAAATCCCGTTGAATATTCACATAACGTCTTTTC
TAGTGTCCTTTTTTTAACATTCATTGCCCAATATATAATGGCTACTCAAA
GTAATTAATAAGTTTCATGGTCGTTAACTTCAATTAATGGTCTATACTCT
TAATTATCTTAATTCTTTCTTTTTTCGTCAGTCAGACTAAAAGCTTCTTC
TTTCGTCATTTATAATGACCACCTTATATAACCAGCCTCGTTTCCATGGT
ACATTCCAAGAACAAAGGCTACTTCACTTTGATCTTTTTTTTTTCCATTT
GAGAGGAAATTTAAAGGAGGTCAACAATCAAGATAAAGCAGAACCAGTTG
ATTTAGTTCAACATTTTCTTGTACTGAACAGCAGAGGTTGTGGACGCGTC
GAAAAGTGAATTCTGTTGCTACCACCATTAAACAATTTGTGAAACTTTCT
TAGTTGGAATCAAAGTACCAAAGTCATGAGAGAGGGAAAAGTCATTAAAC
ACTTTGTTTGGAAGTTAAGAGGTGAGCGGTGGCATTTATTTTCTTGTTAC
GAAAAATTTGTATGGCTATTTGGTTGTTTTTAGGCCCGGTGGAAGCGGGA
AATGAGATTTTTCTTGAAATCCTAGCAAATTTTATCTCATTTTGAGCCTT
CAGCCTCCCCATTTTAACGGTTGTTCCGCCGTGCCTGGTTGTTGTAATTT
CTGAAACCCAGAAAACGCATCTTTTTTTCTCAGCAGTTTTTCTCAATAGT
TTTTCTCAATAGTTTTTCTCAATAGTCCTTATTTTCGGAACCCTCAGACA
TTTTGCCGACGTTTGTTTCAATTTTAGTACTAAAACCTTTAAAGAGTCAA
GGGGCTATTTTTCCTTTTCTACTCCAATCCATGGGCGACCACCTGTTGCT
CAAACCCTGCAAACAAACAATTTCAAATCAATCACAAATCATTGAATATG
TAACTGTGAAACTCCTCACTGTTCACTTTTATAGGTGTGTTCTCATCAAA
GATTTATTAAGTTTCTTCCAAATTTGAACCACACATGAATACATTCTTGA
GAGGAATAATTATTTTTGATATTTTCTTCTTAACAAGATACTTTTCATCT
CTCTCTTGCACCACGGAAGCTCTTTACGTTAAAATTTACATGATATTTTA
TTACCTGAGCATCATAAGGAGGTTTTATGAGTCAGAATGTATTATCTAAC
CAGCTGCTTTTCTGCTTTTCAAACAGAGAGTTTTGAAGGTAGGTTGTTCT
TCCCTTTTCTTCATACCATTTGGTAGATCAGCTCTGTCAATGTAAAATTG
AATTAAATCTTGGTAACTCAAAATATGAATTTTGCGAAAATGACTTTTTG
AGTTAAAAATAAATCTGTTTATCCTTCAGGGTTTTTCAATAATGAAGGAA
AAGCCTTTCCTACGAAATTTCAACTTTGAGAGGATATGGAGCCATTCATA
TTTGCTAATTCTTAGCTTCTTTCCAAAGTCTATCTAATTTTAGAGTGGAA
TATTGTCGGGTTGAATTTTCGTGCCGGATGAACAAACAATGTAACGAATT
TCGTAACAGACATTTTACGAATTTTCAAACTGGAATGATCTCGTTGAACT
TCTAGCGAGTCTGTCAGTTTTACAATTTCTTCATTCTTGTCTTGTTTCTG
CAATCAGCCTTTCCGAAAATTAATTGGAGGGCTACATTGATACCCTACCC
ATGCTGACAAAAAACCTCTTTACCATGGAAACTGGTGAACAATAATGGTG
GCAAAGGTGTTTCCGCCTACCCGCATGTACGCAGGAAGTGTTTAGTGCGG
AAATTCAATAAAAAGTGTGTTTCTGAGCATGGAAAAGATGAATAGAATCT
GTTTCCGTATTATATTGGTATTACAGTTAATGAGTTTTACGCATTTGTTA
ACGAGTTAGTAATCCTGTTAATGGCTTTCACGATCCTTTTCCTGAGATTT
CCATTCGTGTTTCGTAACGAATTGTCGTTGTAGAGATTGTATTAGAAGTA
ATTTGTTCTTGTAAATATCTCGGGAAAATGTCGTATTATATGTTCGCCTC
TTCGACCAAAACAGTTACTGTATATTTCGTTTTGAGGTTTAGCTTTCAGC
TGCTTGAAGAGTATCGACCTTTATTTAGATTTTGAATCTCTAAATAGAAC
CTTTTATCACGTCTTTTTGTTGTTAGTCACCATATTTCTTAAAATAAACG
ATAATTTTAGATGCTTATAAATAGCAGGAAGATAATTACTTTATTGTCTA
TTTGACAATAAGTGATCATGCAGTTCCTAATTTATATTAATTGTTCATGA
TATCATTGAGAGAAGTATTACAATTTAGTTTTTTGAATGTTTATTAGAGC
TTGTGTTACTACTCCTCATTGAAATGTGCGCCAAAGGTTTTGGCTTTTAT
TTGAAGTTCTTGACTGGCAATCGAGAAGAATTTTATTCGAGTTATTATCG
ATTGAAGCTCAAAAGTCGAAGAGGTGAGAACGTGTCTTGACTCTCGGACA
TTTCTTTGTACACTCACTTTTTAGTTTTACGATTACAAGATTTGTTAGAG
AGCTTCAGAAGTATTCTGCAACAAGGAATAAAATAATTAACTTCGTCACC
ATTATACTGTAGAGGGGCTTCATGCTTTGTGTAGAATCTAGTGATTTATT
CCATCCATTACAGAATCAATCACCAAAAAAGTATTTGTTTCACAAATCAT
GGATCAGTAATTTTGTAGGGAGAGGAGGTGTTGACTTTCCTTCTGTTTTG
AATGCTACCGTAAGTTGGTCTAATGTCGACATCTGTCTTCTAATTTCGAC
ATCCTTCGTTGGAATCGCTGATTGAGACTAATTGTCTTTGCTTAATGTTC
AGAGAGGAAAAAATCTTTTGTCCATCAGTGATTCCAACCTTCCTATTATT
CCTATCTCTAAGGATTAAGGGTGTCGAAATCAGAAGACAGATGTCGACAT
TTGACCAACTTACGGGTAGTAAATAAATTTTACCGGCCATTCTCTAAATA
TTAGAGTCCAGTCTCCTTGAATGCGAGCATATGAATGTTTCAGTTTCACA
CAAATTCTCTTCTTACTCGAAAAAAAGCAAAAGAACAAATGAATAAAAGA
AATTCTTGTCATCTTCCTTCTTCTCGGAAAGGAAATTCGATTTTTGAAAA
AGCCTCTCTACGTTGAAGTGTACGGGAAAAGGAAGAACTGTATTCTTTTG
TTTTGCTTGCTTGCACTCCACCCTACAGCTTCATTCATTGAAAACAATTT
ACGTTAATGCTTTTACGAATTACTTGAAACTTTCGGCATGTTTTCTATAC
TCTCATTATTGCTCGAAAATATCGTCGTTCAAAAAAACAAACTTTGTCTT
TTTATGATTCTTTGCCAAATAAAGTTGCCAAGAGTAGTATAGACCAGGCT
TCAAAGACTCTTGTTTGTTAAGCAAAAAAAACGTGTTTGATTTACTTATT
ATAATGGCTAGGAAATCTTCAGGTAATAACATGAAACTAGTATTATACAT
GTTTTCGTATACTAATGAAAAATATCTGGTAAAAGTCTTGTATTACAGTT
TGGTGAAACTCTATCGTTTTACGAATTCATGTCTTTCGTGGAAGTTTTGT
GTTTCATTAGCTAGGAAAGAAATCTGTTGGTCACTGAGTAGGGAAAATGC
AAAAAACTCGGTATTCGCTGAGACGAGGTACAGTAACGATTTCGACTATC
GACAGCTCTAACGAAGTTCCAGTGAGACTGGGAAGATTAAGACTATCCGA
ATGAACACTTTCACTATAATAACTATTATCTTTGACTCTTTTTTGAACCT
TCAGTGCCTGCTTTTTAATGATTTTCCGACCCCTAGTCCCTTCTAAAAAC
TAAACAAATATGCCCTCTTTGTATCCTTTGCTCTGAGCTTAAAACTGTCT
GTCTGTCTGTTTGAGCTTAAAAGTCTGGATCGTCGGTAGAGATACTAATG
CTTTCTAGCTTCAAATCACTGGATTAAAATGATCAATTTGACCTCCTTGG
CTTAGAGTTGTGTGAACATACAAAACGATGAATTCGTCTCTTGACCGTTG
TGTTTTGAAGTACACGTTTTTTTTTTTATTAGAACACCTAAAATTTGGCT
GAGCCTGGATGTGCTTATTTTTTTATCAATTTTCAGCCTAGAATGTTCTT
AAATGCGTTCTTAATTTTTCAGACTACTCTAAATCGACAATATGATACAA
AATAAAGAGCACTTAAATTTGGCAAAATATTTGACTCTCGACTTTTGAAG
ATCCACCCCTAAATTCAGTTAAAACTGCTTAAAAAGAGGAAAAAATTGTA
GTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCATGTTCTTAAGATGT
TCTTAATTTTCGACGAATTTCAGCCTATATGTTCTTATAAACTAGGTTCT
AATAAAAAAAAAAACGTGTAAATCTTTCAGATGCTGATTCAGCTTTATCA
ATGGTTGCCATAGTAACACATTGATGACGTCATTATACAAGTTGATTTAT
GAGAGAATTTTAGTTTAAATATTTATGGAGAATAGTATACAAAAAGTTTT
TAATTCAATTCAAAAATGAATTCAAAAATGTTTTTATTGTAGATTTGAGA
GTACTAAAACGGTTTTATTGAGGAAATCCACAACAGCTTCATAAAGAAGT
TTGTATTTTTTGCGTTTTGACTTTCCTGGCTTTTCGTGGAAGCACCTGAA
AGATTTCGAGATAGAGTCGTTTGCTGGGAGTGTTATATAGAATAATTGAG
AGCGAAGCATCGAGGGTATGTTCACATCTTGTTCTCAATACTTTTGGTAA
TCTTTCAGTAAAGATAGTACTGTACACTACAAAATACAAATTCAATGTGC
ATAGATGATTTATAAAAGGCCCCAGTACCAAATTACCTCATCTTCAGTAA
TTTTTATTCGTCCTCCCAATATACTTCTTCCCTTTGGAAATGTGAAAATA
ACAAATATCAGTTGATTGGTCATTTCTATAGAAGTATATTGCGCTCTTGA
TGATATCGTGTTGTTATGAATGAACTGTTCTAAGCACATCCCATTTCGAC
TATCTTCTAGTATTTTCTCCCTCCTCCCTCTTTGACTGTAAGAACAAAAT
TTTTTCTGTTCAATATAATCAAGACTTTCATTGACAAGGTTCAGTTGGTT
GTATGTGGTGATTAGTACACGTTTTTTTTATAATAGAGCAAACTATACGA
GAACATAAGGCTTTGTGGACTCAAAAACACCCGTTTTCTGAGCAAAATGG
GTAAAAATGGTTACGAAATGGTGATTTTAAGAACATTTTTAGGCTTGAAA
CCCAAAAAGTCAAGAACATCCCAAAGCTTTAAAAAAACGTGTATTCCATG
TCGAGTTGTATAAGTCCATTTATTCGAATATTTGTTACTTTTATTTTGGC
AAACGAATATAAATGTAAGAAACAAAAGATATCACAGTTTCTTATAAAAA
ACTTTCTTTGTATGTATATCCCACTTTCTTGTATAAACAGGACAATACTT
CAAAGTTAATTACTTCCACCTTCGAAATAACTGAAATCAGCATTCTAAAA
AACCTAATTGTCAATTATACGTATATCGTTTTCATTAACAAAATTAACAG
CATAAACGAGGCTATTACAAACTGACGTATTTGTAAACTTTTTTAATCTC
TACCAATTTTGAACAGAGCAGTTCATATCATCAATCTTAAGTCGGCGTGT
GAGAGAAAGTTGATGTCAAAATCTTTATTGGATTTTTGTTGTAAATCAGT
TCAAGGCTTCACTCACTGTGCTGAATTTTTGTTATGTTTTGAAATCAAGA
GAAAGAGAAAGTTATTTCATGCTGAAAACTTGCTAAGAAACAGGAAAAGT
TTTGCTGGTTATGTCAAAATTGCACTTTCCATTTAAGTTATGGTAATTGA
AAGTTGTTGATGTCATTTTAAATTCCTGGAAGAAAGAAATTTGGTGATAC
CCACAATAAGTGTTGTATTTTTGTCAGTAAGGTCAATACGTTGTTTTTTG
TTTTCGGTGGTGGAACGGTAGTTTAGTTTTGATGAGAAAAGTTGTGTACT
TGACCTCTGTAAATCCTTAAGGTGAGGTGTTTGGTACAAGCTCAATCAAT
ATTTTTAATTTTATTCCTTTAAGAGATAAATAACTCCTCTTGTATTATAC
ATTTGGGAAGTAAGCAATTCGATACATACACCCTGTAAGGGGTTATAACG
TTGTAAAACTCGAGCCTCTTCATGTCCATATTAAAGGAGTCGAATTATGG
AAGATTTGCCGAATGATACTCTATAATTCGAACTTGAACGGGATATCTTA
TTTGTTCGAATTACAGAGATATTCGGATAGTAGAAAGTTTCTCCTTGTGT
CTGGGACTGGGACATAAGTTCGAATAAGGGAGTCTACTGTCTACTGTATA
AAAATGTCAAATTTTGTTGCTTTTTATTTTGTAGATTTGCACCAAGCTGT
GTTATCAAAAGAAGAGATGACGGTTTTCCAAGTCAGTGGTGCTCTTCAAT
CGCACGAGAGTTACATCCGCATCATGACAGCCATCAATCATGCCGGACTT
GAGCTCTACTTCAAAGCGTTCCATCACAGGGACGAACTACCCGGTGGTCT
TGGTCTTCCAACAGAACCGGAAAAACTTTACAAGCATCTACAAAAACATC
AATCTGAATTTGACGACCTTCGCTCCAAAGGACAAATCACTGAAAGAGAG
TATCTAACCATTTTCCCAGCTGGCAAGAAAGAGACTTATTCTCAGGAATT
CTCATTCCCGCTTTTCCAAAAATTGTTACAAATGTTTGACCGAGCAGGAC
TTGATGCGGAAACAGCAAACTCGGATGACGAGCGAAACGTATTTTTGCAA
GAAATGTCGAAATTTGAATACATATTGAAAGATAAGAAACTGGTCAAAAA
GATTAACAATTCTGATGAGACTTTCAATGAAATTTGGGATGACGTCATTC
AGATCTTGAAAAATGTCAAATATGATATAACACGAATCGAATCCTTACGA
ACAAGCGATCTAGAAGAAAATAATAAATTCCGATTCGCTCTCTTAAAATC
CGAAGTCAACGCTTTATTGTGGGAATGTGATGATTGTTTCAAGACTGTCA
AAATGAACCATCTAGCCTTGGATCGCCTCAAAGGGAACTTCCAGGCTGCA
CTCTCTGAAGTCAAAACAGAAAATAACAACGCTAAAACAGCTAACGAGTT
AAAAGAACTGAATACAGTCACAGATGAACTTCAAAAATCTGAAAATAAAA
TCATGGTTCAAAAACAACAGCTAAACGAAATTGTTCCAAATATTAAATTT
TGGCGGGAAAAGAACATTGAAGGTGACGTCATCATTTGTGACGAGAACAT
TTCGAAATTGAGACATGAAGTAAATGAACAGACCAGACGAGTCGGTGATT
TGTTCAACACCGTATCTTTCGATATCATTCACCTGAAGGAGCGAGCATAC
AGTGCGACTGGAGAAGCTAAAAACATCGGACTTCCTTTACATAAATCGCA
TTGAGTTTTGCGACTGTTTCAGATTTTTTTTTTTGTACATATTATTAAGG
TCTATTATCTTTATATTTATTATTTTAATGCAAGTTTTATTTTTAATTTG
TTCTAGGTCTTTCAATTGATTATTCCGAAATTGATGCTGAATATTTTGGG
AACTTTTTTGGATTGACCGGTTGAACCTTTAGTCTTTTGCTTTATTGATT
TCAGAAAAAAATAAAAGATAGAGAATTTTGTATAGATTTCACTGGCGTGT
CATTTCATTGAGTTACTTTAAACAACACTTCTAC Coding sequence (CDS) from alignment at sc0000088_pilon:279427..289060- >MSTRG.11918.7.p1 ID=MSTRG.11918.7.p1|Name=MSTRG.11918.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000088_pilon:279427..289060- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGTTTTCCAAGTCAGTGGTGCTCTTCAATCGCACGAGAGTTACAT
CCGCATCATGACAGCCATCAATCATGCCGGACTTGAGCTCTACTTCAAAG
CGTTCCATCACAGGGACGAACTACCCGGTGGTCTTGGTCTTCCAACAGAA
CCGGAAAAACTTTACAAGCATCTACAAAAACATCAATCTGAATTTGACGA
CCTTCGCTCCAAAGGACAAATCACTGAAAGAGAGTATCTAACCATTTTCC
CAGCTGGCAAGAAAGAGACTTATTCTCAGGAATTCTCATTCCCGCTTTTC
CAAAAATTGTTACAAATGTTTGACCGAGCAGGACTTGATGCGGAAACAGC
AAACTCGGATGACGAGCGAAACGTATTTTTGCAAGAAATGTCGAAATTTG
AATACATATTGAAAGATAAGAAACTGGTCAAAAAGATTAACAATTCTGAT
GAGACTTTCAATGAAATTTGGGATGACGTCATTCAGATCTTGAAAAATGT
CAAATATGATATAACACGAATCGAATCCTTACGAACAAGCGATCTAGAAG
AAAATAATAAATTCCGATTCGCTCTCTTAAAATCCGAAGTCAACGCTTTA
TTGTGGGAATGTGATGATTGTTTCAAGACTGTCAAAATGAACCATCTAGC
CTTGGATCGCCTCAAAGGGAACTTCCAGGCTGCACTCTCTGAAGTCAAAA
CAGAAAATAACAACGCTAAAACAGCTAACGAGTTAAAAGAACTGAATACA
GTCACAGATGAACTTCAAAAATCTGAAAATAAAATCATGGTTCAAAAACA
ACAGCTAAACGAAATTGTTCCAAATATTAAATTTTGGCGGGAAAAGAACA
TTGAAGGTGACGTCATCATTTGTGACGAGAACATTTCGAAATTGAGACAT
GAAGTAAATGAACAGACCAGACGAGTCGGTGATTTGTTCAACACCGTATC
TTTCGATATCATTCACCTGAAGGAGCGAGCATACAGTGCGACTGGAGAAG
CTAAAAACATCGGACTTCCTTTACATAAATCGCATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:279427..289060 - |
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