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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:279427..284972- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11918.6.p1 ID=MSTRG.11918.6.p1|Name=MSTRG.11918.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5546bp|location=Sequence derived from alignment at sc0000088_pilon:279427..284972- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTATTGTCTATTTGACAATAAGTGATCATGCAGTTCCTAATTTATATT
AATTGTTCATGATATCATTGAGAGAAGTATTACAATTTAGTTTTTTGAAT
GTTTATTAGAGCTTGTGTTACTACTCCTCATTGAAATGTGCGCCAAAGGT
TTTGGCTTTTATTTGAAGTTCTTGACTGGCAATCGAGAAGAATTTTATTC
GAGTTATTATCGATTGAAGCTCAAAAGTCGAAGAGGTGAGAACGTGTCTT
GACTCTCGGACATTTCTTTGTACACTCACTTTTTAGTTTTACGATTACAA
GATTTGTTAGAGAGCTTCAGAAGTATTCTGCAACAAGGAATAAAATAATT
AACTTCGTCACCATTATACTGTAGAGGGGCTTCATGCTTTGTGTAGAATC
TAGTGATTTATTCCATCCATTACAGAATCAATCACCAAAAAAGTATTTGT
TTCACAAATCATGGATCAGTAATTTTGTAGGGAGAGGAGGTGTTGACTTT
CCTTCTGTTTTGAATGCTACCGTAAGTTGGTCTAATGTCGACATCTGTCT
TCTAATTTCGACATCCTTCGTTGGAATCGCTGATTGAGACTAATTGTCTT
TGCTTAATGTTCAGAGAGGAAAAAATCTTTTGTCCATCAGTGATTCCAAC
CTTCCTATTATTCCTATCTCTAAGGATTAAGGGTGTCGAAATCAGAAGAC
AGATGTCGACATTTGACCAACTTACGGGTAGTAAATAAATTTTACCGGCC
ATTCTCTAAATATTAGAGTCCAGTCTCCTTGAATGCGAGCATATGAATGT
TTCAGTTTCACACAAATTCTCTTCTTACTCGAAAAAAAGCAAAAGAACAA
ATGAATAAAAGAAATTCTTGTCATCTTCCTTCTTCTCGGAAAGGAAATTC
GATTTTTGAAAAAGCCTCTCTACGTTGAAGTGTACGGGAAAAGGAAGAAC
TGTATTCTTTTGTTTTGCTTGCTTGCACTCCACCCTACAGCTTCATTCAT
TGAAAACAATTTACGTTAATGCTTTTACGAATTACTTGAAACTTTCGGCA
TGTTTTCTATACTCTCATTATTGCTCGAAAATATCGTCGTTCAAAAAAAC
AAACTTTGTCTTTTTATGATTCTTTGCCAAATAAAGTTGCCAAGAGTAGT
ATAGACCAGGCTTCAAAGACTCTTGTTTGTTAAGCAAAAAAAACGTGTTT
GATTTACTTATTATAATGGCTAGGAAATCTTCAGGTAATAACATGAAACT
AGTATTATACATGTTTTCGTATACTAATGAAAAATATCTGGTAAAAGTCT
TGTATTACAGTTTGGTGAAACTCTATCGTTTTACGAATTCATGTCTTTCG
TGGAAGTTTTGTGTTTCATTAGCTAGGAAAGAAATCTGTTGGTCACTGAG
TAGGGAAAATGCAAAAAACTCGGTATTCGCTGAGACGAGGTACAGTAACG
ATTTCGACTATCGACAGCTCTAACGAAGTTCCAGTGAGACTGGGAAGATT
AAGACTATCCGAATGAACACTTTCACTATAATAACTATTATCTTTGACTC
TTTTTTGAACCTTCAGTGCCTGCTTTTTAATGATTTTCCGACCCCTAGTC
CCTTCTAAAAACTAAACAAATATGCCCTCTTTGTATCCTTTGCTCTGAGC
TTAAAACTGTCTGTCTGTCTGTTTGAGCTTAAAAGTCTGGATCGTCGGTA
GAGATACTAATGCTTTCTAGCTTCAAATCACTGGATTAAAATGATCAATT
TGACCTCCTTGGCTTAGAGTTGTGTGAACATACAAAACGATGAATTCGTC
TCTTGACCGTTGTGTTTTGAAGTACACGTTTTTTTTTTTATTAGAACACC
TAAAATTTGGCTGAGCCTGGATGTGCTTATTTTTTTATCAATTTTCAGCC
TAGAATGTTCTTAAATGCGTTCTTAATTTTTCAGACTACTCTAAATCGAC
AATATGATACAAAATAAAGAGCACTTAAATTTGGCAAAATATTTGACTCT
CGACTTTTGAAGATCCACCCCTAAATTCAGTTAAAACTGCTTAAAAAGAG
GAAAAAATTGTAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCATG
TTCTTAAGATGTTCTTAATTTTCGACGAATTTCAGCCTATATGTTCTTAT
AAACTAGGTTCTAATAAAAAAAAAAACGTGTAAATCTTTCAGATGCTGAT
TCAGCTTTATCAATGGTTGCCATAGTAACACATTGATGACGTCATTATAC
AAGTTGATTTATGAGAGAATTTTAGTTTAAATATTTATGGAGAATAGTAT
ACAAAAAGTTTTTAATTCAATTCAAAAATGAATTCAAAAATGTTTTTATT
GTAGATTTGAGAGTACTAAAACGGTTTTATTGAGGAAATCCACAACAGCT
TCATAAAGAAGTTTGTATTTTTTGCGTTTTGACTTTCCTGGCTTTTCGTG
GAAGCACCTGAAAGATTTCGAGATAGAGTCGTTTGCTGGGAGTGTTATAT
AGAATAATTGAGAGCGAAGCATCGAGGGTATGTTCACATCTTGTTCTCAA
TACTTTTGGTAATCTTTCAGTAAAGATAGTACTGTACACTACAAAATACA
AATTCAATGTGCATAGATGATTTATAAAAGGCCCCAGTACCAAATTACCT
CATCTTCAGTAATTTTTATTCGTCCTCCCAATATACTTCTTCCCTTTGGA
AATGTGAAAATAACAAATATCAGTTGATTGGTCATTTCTATAGAAGTATA
TTGCGCTCTTGATGATATCGTGTTGTTATGAATGAACTGTTCTAAGCACA
TCCCATTTCGACTATCTTCTAGTATTTTCTCCCTCCTCCCTCTTTGACTG
TAAGAACAAAATTTTTTCTGTTCAATATAATCAAGACTTTCATTGACAAG
GTTCAGTTGGTTGTATGTGGTGATTAGTACACGTTTTTTTTATAATAGAG
CAAACTATACGAGAACATAAGGCTTTGTGGACTCAAAAACACCCGTTTTC
TGAGCAAAATGGGTAAAAATGGTTACGAAATGGTGATTTTAAGAACATTT
TTAGGCTTGAAACCCAAAAAGTCAAGAACATCCCAAAGCTTTAAAAAAAC
GTGTATTCCATGTCGAGTTGTATAAGTCCATTTATTCGAATATTTGTTAC
TTTTATTTTGGCAAACGAATATAAATGTAAGAAACAAAAGATATCACAGT
TTCTTATAAAAAACTTTCTTTGTATGTATATCCCACTTTCTTGTATAAAC
AGGACAATACTTCAAAGTTAATTACTTCCACCTTCGAAATAACTGAAATC
AGCATTCTAAAAAACCTAATTGTCAATTATACGTATATCGTTTTCATTAA
CAAAATTAACAGCATAAACGAGGCTATTACAAACTGACGTATTTGTAAAC
TTTTTTAATCTCTACCAATTTTGAACAGAGCAGTTCATATCATCAATCTT
AAGTCGGCGTGTGAGAGAAAGTTGATGTCAAAATCTTTATTGGATTTTTG
TTGTAAATCAGTTCAAGGCTTCACTCACTGTGCTGAATTTTTGTTATGTT
TTGAAATCAAGAGAAAGAGAAAGTTATTTCATGCTGAAAACTTGCTAAGA
AACAGGAAAAGTTTTGCTGGTTATGTCAAAATTGCACTTTCCATTTAAGT
TATGGTAATTGAAAGTTGTTGATGTCATTTTAAATTCCTGGAAGAAAGAA
ATTTGGTGATACCCACAATAAGTGTTGTATTTTTGTCAGTAAGGTCAATA
CGTTGTTTTTTGTTTTCGGTGGTGGAACGGTAGTTTAGTTTTGATGAGAA
AAGTTGTGTACTTGACCTCTGTAAATCCTTAAGGTGAGGTGTTTGGTACA
AGCTCAATCAATATTTTTAATTTTATTCCTTTAAGAGATAAATAACTCCT
CTTGTATTATACATTTGGGAAGTAAGCAATTCGATACATACACCCTGTAA
GGGGTTATAACGTTGTAAAACTCGAGCCTCTTCATGTCCATATTAAAGGA
GTCGAATTATGGAAGATTTGCCGAATGATACTCTATAATTCGAACTTGAA
CGGGATATCTTATTTGTTCGAATTACAGAGATATTCGGATAGTAGAAAGT
TTCTCCTTGTGTCTGGGACTGGGACATAAGTTCGAATAAGGGAGTCTACT
GTCTACTGTATAAAAATGTCAAATTTTGTTGCTTTTTATTTTGTAGATTT
GCACCAAGCTGTGTTATCAAAAGAAGAGATGACGGTTTTCCAAGTCAGTG
GTGCTCTTCAATCGCACGAGAGTTACATCCGCATCATGACAGCCATCAAT
CATGCCGGACTTGAGCTCTACTTCAAAGCGTTCCATCACAGGGACGAACT
ACCCGGTGGTCTTGGTCTTCCAACAGAACCGGAAAAACTTTACAAGCATC
TACAAAAACATCAATCTGAATTTGACGACCTTCGCTCCAAAGGACAAATC
ACTGAAAGAGAGTATCTAACCATTTTCCCAGCTGGCAAGAAAGAGACTTA
TTCTCAGGAATTCTCATTCCCGCTTTTCCAAAAATTGTTACAAATGTTTG
ACCGAGCAGGACTTGATGCGGAAACAGCAAACTCGGATGACGAGCGAAAC
GTATTTTTGCAAGAAATGTCGAAATTTGAATACATATTGAAAGATAAGAA
ACTGGTCAAAAAGATTAACAATTCTGATGAGACTTTCAATGAAATTTGGG
ATGACGTCATTCAGATCTTGAAAAATGTCAAATATGATATAACACGAATC
GAATCCTTACGAACAAGCGATCTAGAAGAAAATAATAAATTCCGATTCGC
TCTCTTAAAATCCGAAGTCAACGCTTTATTGTGGGAATGTGATGATTGTT
TCAAGACTGTCAAAATGAACCATCTAGCCTTGGATCGCCTCAAAGGGAAC
TTCCAGGCTGCACTCTCTGAAGTCAAAACAGAAAATAACAACGCTAAAAC
AGCTAACGAGTTAAAAGAACTGAATACAGTCACAGATGAACTTCAAAAAT
CTGAAAATAAAATCATGGTTCAAAAACAACAGCTAAACGAAATTGTTCCA
AATATTAAATTTTGGCGGGAAAAGAACATTGAAGGTGACGTCATCATTTG
TGACGAGAACATTTCGAAATTGAGACATGAAGTAAATGAACAGACCAGAC
GAGTCGGTGATTTGTTCAACACCGTATCTTTCGATATCATTCACCTGAAG
GAGCGAGCATACAGTGCGACTGGAGAAGCTAAAAACATCGGACTTCCTTT
ACATAAATCGCATTGAGTTTTGCGACTGTTTCAGATTTTTTTTTTTGTAC
ATATTATTAAGGTCTATTATCTTTATATTTATTATTTTAATGCAAGTTTT
ATTTTTAATTTGTTCTAGGTCTTTCAATTGATTATTCCGAAATTGATGCT
GAATATTTTGGGAACTTTTTTGGATTGACCGGTTGAACCTTTAGTCTTTT
GCTTTATTGATTTCAGAAAAAAATAAAAGATAGAGAATTTTGTATAGATT
TCACTGGCGTGTCATTTCATTGAGTTACTTTAAACAACACTTCTAC Coding sequence (CDS) from alignment at sc0000088_pilon:279427..284972- >MSTRG.11918.6.p1 ID=MSTRG.11918.6.p1|Name=MSTRG.11918.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2340bp|location=Sequence derived from alignment at sc0000088_pilon:279427..284972- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGCACCAAGCTGTGTTATCAAAAGAAGAGATGACGGTTTTCCAAGTC
AGTGGTGCTCTTCAATCGCACGAGAGTTACATCCGCATCATGACAGCCAT
CAATCATGCCGGACTTGAGCTCTACTTCAAAGCGTTCCATCACAGGGACG
AACTACCCGGTGGTCTTGGTCTTCCAACAGAACCGGAAAAACTTTACAAG
CATCTACAAAAACATCAATCTGAATTTGACGACCTTCGCTCCAAAGGACA
AATCACTGAAAGAGAGTATCTAACCATTTTCCCAGCTGGCAAGAAAGAGA
CTTATTCTCAGGAATTCTCATTCCCGCTTTTCCAAAAATTGTTACAAATG
TTTGACCGAGCAGGACTTGATGCGGAAACAGCAAACTCGGATGACGAGCG
AAACGTATTTTTGCAAGAAATGTCGAAATTTGAATACATATTGAAAGATA
AGAAACTGGTCAAAAAGATTAACAATTCTGATGAGACTTTCAATGAAATT
TGGGATGACGTCATTCAGATCTTGAAAAATGTCAAATATGATATAACACG
AATCGAATCCTTACGAACAAGCGATCTAGAAGAAAATAATAAATTCCGAT
TCGCTCTCTTAAAATCCGAAGTCAACGCTTTATTGTGGGAATGTGATGAT
TGTTTCAAGACTGTCAAAATGAACCATCTAGCCTTGGATCGCCTCAAAGG
GAACTTCCAGGCTGCACTCTCTGAAGTCAAAACAGAAAATAACAACGCTA
AAACAGCTAACGAGTTAAAAGAACTGAATACAGTCACAGATGAACTTCAA
AAATCTGAAAATAAAATCATGGTTCAAAAACAACAGCTAAACGAAATTGT
TCCAAATATTAAATTTTGGCGGGAAAAGAACATTGAAGGTGACGTCATCA
TTTGTGACGAGAACATTTCGAAATTGAGACATGAAGTAAATGAACAGACC
AGACGAGTCGGTGATTTGTTCAACACCGTATCTTTCGATATCATTCACCT
GAAGGAGCGAGCATACAGTGCGACTGGAGAAGCTAAAAACATCGGACTTC
CTTTACATAAATCGCATTGAATGTGCGCCAAAGGTTTTGGCTTTTATTTG
AAGTTCTTGACTGGCAATCGAGAAGAATTTTATTCGAGTTATTATCGATT
GAAGCTCAAAAGTCGAAGAGATTTGCACCAAGCTGTGTTATCAAAAGAAG
AGATGACGGTTTTCCAAGTCAGTGGTGCTCTTCAATCGCACGAGAGTTAC
ATCCGCATCATGACAGCCATCAATCATGCCGGACTTGAGCTCTACTTCAA
AGCGTTCCATCACAGGGACGAACTACCCGGTGGTCTTGGTCTTCCAACAG
AACCGGAAAAACTTTACAAGCATCTACAAAAACATCAATCTGAATTTGAC
GACCTTCGCTCCAAAGGACAAATCACTGAAAGAGAGTATCTAACCATTTT
CCCAGCTGGCAAGAAAGAGACTTATTCTCAGGAATTCTCATTCCCGCTTT
TCCAAAAATTGTTACAAATGTTTGACCGAGCAGGACTTGATGCGGAAACA
GCAAACTCGGATGACGAGCGAAACGTATTTTTGCAAGAAATGTCGAAATT
TGAATACATATTGAAAGATAAGAAACTGGTCAAAAAGATTAACAATTCTG
ATGAGACTTTCAATGAAATTTGGGATGACGTCATTCAGATCTTGAAAAAT
GTCAAATATGATATAACACGAATCGAATCCTTACGAACAAGCGATCTAGA
AGAAAATAATAAATTCCGATTCGCTCTCTTAAAATCCGAAGTCAACGCTT
TATTGTGGGAATGTGATGATTGTTTCAAGACTGTCAAAATGAACCATCTA
GCCTTGGATCGCCTCAAAGGGAACTTCCAGGCTGCACTCTCTGAAGTCAA
AACAGAAAATAACAACGCTAAAACAGCTAACGAGTTAAAAGAACTGAATA
CAGTCACAGATGAACTTCAAAAATCTGAAAATAAAATCATGGTTCAAAAA
CAACAGCTAAACGAAATTGTTCCAAATATTAAATTTTGGCGGGAAAAGAA
CATTGAAGGTGACGTCATCATTTGTGACGAGAACATTTCGAAATTGAGAC
ATGAAGTAAATGAACAGACCAGACGAGTCGGTGATTTGTTCAACACCGTA
TCTTTCGATATCATTCACCTGAAGGAGCGAGCATACAGTGCGACTGGAGA
AGCTAAAAACATCGGACTTCCTTTACATAAATCGCATTGAATGTGCGCCA
AAGGTTTTGGCTTTTATTTGAAGTTCTTGACTGGCAATCGAGAAGAATTT
TATTCGAGTTATTATCGATTGAAGCTCAAAAGTCGAAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:279427..284972 - |
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