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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:279490..287103- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11918.12.p1 ID=MSTRG.11918.12.p1|Name=MSTRG.11918.12.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7614bp|location=Sequence derived from alignment at sc0000088_pilon:279490..287103- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAGTTTCATGGTCGTTAACTTCAATTAATGGTCTATACTCTTAATTAT
CTTAATTCTTTCTTTTTTCGTCAGTCAGACTAAAAGCTTCTTCTTTCGTC
ATTTATAATGACCACCTTATATAACCAGCCTCGTTTCCATGGTACATTCC
AAGAACAAAGGCTACTTCACTTTGATCTTTTTTTTTTCCATTTGAGAGGA
AATTTAAAGGAGGTCAACAATCAAGATAAAGCAGAACCAGTTGATTTAGT
TCAACATTTTCTTGTACTGAACAGCAGAGGTTGTGGACGCGTCGAAAAGT
GAATTCTGTTGCTACCACCATTAAACAATTTGTGAAACTTTCTTAGTTGG
AATCAAAGTACCAAAGTCATGAGAGAGGGAAAAGTCATTAAACACTTTGT
TTGGAAGTTAAGAGGTGAGCGGTGGCATTTATTTTCTTGTTACGAAAAAT
TTGTATGGCTATTTGGTTGTTTTTAGGCCCGGTGGAAGCGGGAAATGAGA
TTTTTCTTGAAATCCTAGCAAATTTTATCTCATTTTGAGCCTTCAGCCTC
CCCATTTTAACGGTTGTTCCGCCGTGCCTGGTTGTTGTAATTTCTGAAAC
CCAGAAAACGCATCTTTTTTTCTCAGCAGTTTTTCTCAATAGTTTTTCTC
AATAGTTTTTCTCAATAGTCCTTATTTTCGGAACCCTCAGACATTTTGCC
GACGTTTGTTTCAATTTTAGTACTAAAACCTTTAAAGAGTCAAGGGGCTA
TTTTTCCTTTTCTACTCCAATCCATGGGCGACCACCTGTTGCTCAAACCC
TGCAAACAAACAATTTCAAATCAATCACAAATCATTGAATATGTAACTGT
GAAACTCCTCACTGTTCACTTTTATAGGTGTGTTCTCATCAAAGATTTAT
TAAGTTTCTTCCAAATTTGAACCACACATGAATACATTCTTGAGAGGAAT
AATTATTTTTGATATTTTCTTCTTAACAAGATACTTTTCATCTCTCTCTT
GCACCACGGAAGCTCTTTACGTTAAAATTTACATGATATTTTATTACCTG
AGCATCATAAGGAGGTTTTATGAGTCAGAATGTATTATCTAACCAGCTGC
TTTTCTGCTTTTCAAACAGAGAGTTTTGAAGGTAGGTTGTTCTTCCCTTT
TCTTCATACCATTTGGTAGATCAGCTCTGTCAATGTAAAATTGAATTAAA
TCTTGGTAACTCAAAATATGAATTTTGCGAAAATGACTTTTTGAGTTAAA
AATAAATCTGTTTATCCTTCAGGGTTTTTCAATAATGAAGGAAAAGCCTT
TCCTACGAAATTTCAACTTTGAGAGGATATGGAGCCATTCATATTTGCTA
ATTCTTAGCTTCTTTCCAAAGTCTATCTAATTTTAGAGTGGAATATTGTC
GGGTTGAATTTTCGTGCCGGATGAACAAACAATGTAACGAATTTCGTAAC
AGACATTTTACGAATTTTCAAACTGGAATGATCTCGTTGAACTTCTAGCG
AGTCTGTCAGTTTTACAATTTCTTCATTCTTGTCTTGTTTCTGCAATCAG
CCTTTCCGAAAATTAATTGGAGGGCTACATTGATACCCTACCCATGCTGA
CAAAAAACCTCTTTACCATGGAAACTGGTGAACAATAATGGTGGCAAAGG
TGTTTCCGCCTACCCGCATGTACGCAGGAAGTGTTTAGTGCGGAAATTCA
ATAAAAAGTGTGTTTCTGAGCATGGAAAAGATGAATAGAATCTGTTTCCG
TATTATATTGGTATTACAGTTAATGAGTTTTACGCATTTGTTAACGAGTT
AGTAATCCTGTTAATGGCTTTCACGATCCTTTTCCTGAGATTTCCATTCG
TGTTTCGTAACGAATTGTCGTTGTAGAGATTGTATTAGAAGTAATTTGTT
CTTGTAAATATCTCGGGAAAATGTCGTATTATATGTTCGCCTCTTCGACC
AAAACAGTTACTGTATATTTCGTTTTGAGGTTTAGCTTTCAGCTGCTTGA
AGAGTATCGACCTTTATTTAGATTTTGAATCTCTAAATAGAACCTTTTAT
CACGTCTTTTTGTTGTTAGTCACCATATTTCTTAAAATAAACGATAATTT
TAGATGCTTATAAATAGCAGGAAGATAATTACTTTATTGTCTATTTGACA
ATAAGTGATCATGCAGTTCCTAATTTATATTAATTGTTCATGATATCATT
GAGAGAAGTATTACAATTTAGTTTTTTGAATGTTTATTAGAGCTTGTGTT
ACTACTCCTCATTGAAATGTGCGCCAAAGGTTTTGGCTTTTATTTGAAGT
TCTTGACTGGCAATCGAGAAGAATTTTATTCGAGTTATTATCGATTGAAG
CTCAAAAGTCGAAGAGGTGAGAACGTGTCTTGACTCTCGGACATTTCTTT
GTACACTCACTTTTTAGTTTTACGATTACAAGATTTGTTAGAGAGCTTCA
GAAGTATTCTGCAACAAGGAATAAAATAATTAACTTCGTCACCATTATAC
TGTAGAGGGGCTTCATGCTTTGTGTAGAATCTAGTGATTTATTCCATCCA
TTACAGAATCAATCACCAAAAAAGTATTTGTTTCACAAATCATGGATCAG
TAATTTTGTAGGGAGAGGAGGTGTTGACTTTCCTTCTGTTTTGAATGCTA
CCGTAAGTTGGTCTAATGTCGACATCTGTCTTCTAATTTCGACATCCTTC
GTTGGAATCGCTGATTGAGACTAATTGTCTTTGCTTAATGTTCAGAGAGG
AAAAAATCTTTTGTCCATCAGTGATTCCAACCTTCCTATTATTCCTATCT
CTAAGGATTAAGGGTGTCGAAATCAGAAGACAGATGTCGACATTTGACCA
ACTTACGGGTAGTAAATAAATTTTACCGGCCATTCTCTAAATATTAGAGT
CCAGTCTCCTTGAATGCGAGCATATGAATGTTTCAGTTTCACACAAATTC
TCTTCTTACTCGAAAAAAAGCAAAAGAACAAATGAATAAAAGAAATTCTT
GTCATCTTCCTTCTTCTCGGAAAGGAAATTCGATTTTTGAAAAAGCCTCT
CTACGTTGAAGTGTACGGGAAAAGGAAGAACTGTATTCTTTTGTTTTGCT
TGCTTGCACTCCACCCTACAGCTTCATTCATTGAAAACAATTTACGTTAA
TGCTTTTACGAATTACTTGAAACTTTCGGCATGTTTTCTATACTCTCATT
ATTGCTCGAAAATATCGTCGTTCAAAAAAACAAACTTTGTCTTTTTATGA
TTCTTTGCCAAATAAAGTTGCCAAGAGTAGTATAGACCAGGCTTCAAAGA
CTCTTGTTTGTTAAGCAAAAAAAACGTGTTTGATTTACTTATTATAATGG
CTAGGAAATCTTCAGGTAATAACATGAAACTAGTATTATACATGTTTTCG
TATACTAATGAAAAATATCTGGTAAAAGTCTTGTATTACAGTTTGGTGAA
ACTCTATCGTTTTACGAATTCATGTCTTTCGTGGAAGTTTTGTGTTTCAT
TAGCTAGGAAAGAAATCTGTTGGTCACTGAGTAGGGAAAATGCAAAAAAC
TCGGTATTCGCTGAGACGAGGTACAGTAACGATTTCGACTATCGACAGCT
CTAACGAAGTTCCAGTGAGACTGGGAAGATTAAGACTATCCGAATGAACA
CTTTCACTATAATAACTATTATCTTTGACTCTTTTTTGAACCTTCAGTGC
CTGCTTTTTAATGATTTTCCGACCCCTAGTCCCTTCTAAAAACTAAACAA
ATATGCCCTCTTTGTATCCTTTGCTCTGAGCTTAAAACTGTCTGTCTGTC
TGTTTGAGCTTAAAAGTCTGGATCGTCGGTAGAGATACTAATGCTTTCTA
GCTTCAAATCACTGGATTAAAATGATCAATTTGACCTCCTTGGCTTAGAG
TTGTGTGAACATACAAAACGATGAATTCGTCTCTTGACCGTTGTGTTTTG
AAGTACACGTTTTTTTTTTTATTAGAACACCTAAAATTTGGCTGAGCCTG
GATGTGCTTATTTTTTTATCAATTTTCAGCCTAGAATGTTCTTAAATGCG
TTCTTAATTTTTCAGACTACTCTAAATCGACAATATGATACAAAATAAAG
AGCACTTAAATTTGGCAAAATATTTGACTCTCGACTTTTGAAGATCCACC
CCTAAATTCAGTTAAAACTGCTTAAAAAGAGGAAAAAATTGTAGTTTCTT
GTCATTTTTTTCCAAACTGAGGCTGGGCATGTTCTTAAGATGTTCTTAAT
TTTCGACGAATTTCAGCCTATATGTTCTTATAAACTAGGTTCTAATAAAA
AAAAAAACGTGTAAATCTTTCAGATGCTGATTCAGCTTTATCAATGGTTG
CCATAGTAACACATTGATGACGTCATTATACAAGTTGATTTATGAGAGAA
TTTTAGTTTAAATATTTATGGAGAATAGTATACAAAAAGTTTTTAATTCA
ATTCAAAAATGAATTCAAAAATGTTTTTATTGTAGATTTGAGAGTACTAA
AACGGTTTTATTGAGGAAATCCACAACAGCTTCATAAAGAAGTTTGTATT
TTTTGCGTTTTGACTTTCCTGGCTTTTCGTGGAAGCACCTGAAAGATTTC
GAGATAGAGTCGTTTGCTGGGAGTGTTATATAGAATAATTGAGAGCGAAG
CATCGAGGGTATGTTCACATCTTGTTCTCAATACTTTTGGTAATCTTTCA
GTAAAGATAGTACTGTACACTACAAAATACAAATTCAATGTGCATAGATG
ATTTATAAAAGGCCCCAGTACCAAATTACCTCATCTTCAGTAATTTTTAT
TCGTCCTCCCAATATACTTCTTCCCTTTGGAAATGTGAAAATAACAAATA
TCAGTTGATTGGTCATTTCTATAGAAGTATATTGCGCTCTTGATGATATC
GTGTTGTTATGAATGAACTGTTCTAAGCACATCCCATTTCGACTATCTTC
TAGTATTTTCTCCCTCCTCCCTCTTTGACTGTAAGAACAAAATTTTTTCT
GTTCAATATAATCAAGACTTTCATTGACAAGGTTCAGTTGGTTGTATGTG
GTGATTAGTACACGTTTTTTTTATAATAGAGCAAACTATACGAGAACATA
AGGCTTTGTGGACTCAAAAACACCCGTTTTCTGAGCAAAATGGGTAAAAA
TGGTTACGAAATGGTGATTTTAAGAACATTTTTAGGCTTGAAACCCAAAA
AGTCAAGAACATCCCAAAGCTTTAAAAAAACGTGTATTCCATGTCGAGTT
GTATAAGTCCATTTATTCGAATATTTGTTACTTTTATTTTGGCAAACGAA
TATAAATGTAAGAAACAAAAGATATCACAGTTTCTTATAAAAAACTTTCT
TTGTATGTATATCCCACTTTCTTGTATAAACAGGACAATACTTCAAAGTT
AATTACTTCCACCTTCGAAATAACTGAAATCAGCATTCTAAAAAACCTAA
TTGTCAATTATACGTATATCGTTTTCATTAACAAAATTAACAGCATAAAC
GAGGCTATTACAAACTGACGTATTTGTAAACTTTTTTAATCTCTACCAAT
TTTGAACAGAGCAGTTCATATCATCAATCTTAAGTCGGCGTGTGAGAGAA
AGTTGATGTCAAAATCTTTATTGGATTTTTGTTGTAAATCAGTTCAAGGC
TTCACTCACTGTGCTGAATTTTTGTTATGTTTTGAAATCAAGAGAAAGAG
AAAGTTATTTCATGCTGAAAACTTGCTAAGAAACAGGAAAAGTTTTGCTG
GTTATGTCAAAATTGCACTTTCCATTTAAGTTATGGTAATTGAAAGTTGT
TGATGTCATTTTAAATTCCTGGAAGAAAGAAATTTGGTGATACCCACAAT
AAGTGTTGTATTTTTGTCAGTAAGGTCAATACGTTGTTTTTTGTTTTCGG
TGGTGGAACGGTAGTTTAGTTTTGATGAGAAAAGTTGTGTACTTGACCTC
TGTAAATCCTTAAGGTGAGGTGTTTGGTACAAGCTCAATCAATATTTTTA
ATTTTATTCCTTTAAGAGATAAATAACTCCTCTTGTATTATACATTTGGG
AAGTAAGCAATTCGATACATACACCCTGTAAGGGGTTATAACGTTGTAAA
ACTCGAGCCTCTTCATGTCCATATTAAAGGAGTCGAATTATGGAAGATTT
GCCGAATGATACTCTATAATTCGAACTTGAACGGGATATCTTATTTGTTC
GAATTACAGAGATATTCGGATAGTAGAAAGTTTCTCCTTGTGTCTGGGAC
TGGGACATAAGTTCGAATAAGGGAGTCTACTGTCTACTGTATAAAAATGT
CAAATTTTGTTGCTTTTTATTTTGTAGATTTGCACCAAGCTGTGTTATCA
AAAGAAGAGATGACGGTTTTCCAAGTCAGTGGTGCTCTTCAATCGCACGA
GAGTTACATCCGCATCATGACAGCCATCAATCATGCCGGACTTGAGCTCT
ACTTCAAAGCGTTCCATCACAGGGACGAACTACCCGGTGGTCTTGGTCTT
CCAACAGAACCGGAAAAACTTTACAAGCATCTACAAAAACATCAATCTGA
ATTTGACGACCTTCGCTCCAAAGGACAAATCACTGAAAGAGAGTATCTAA
CCATTTTCCCAGCTGGCAAGAAAGAGACTTATTCTCAGGAATTCTCATTC
CCGCTTTTCCAAAAATTGTTACAAATGTTTGACCGAGCAGGACTTGATGC
GGAAACAGCAAACTCGGATGACGAGCGAAACGTATTTTTGCAAGAAATGT
CGAAATTTGAATACATATTGAAAGATAAGAAACTGGTCAAAAAGATTAAC
AATTCTGATGAGACTTTCAATGAAATTTGGGATGACGTCATTCAGATCTT
GAAAAATGTCAAATATGATATAACACGAATCGAATCCTTACGAACAAGCG
ATCTAGAAGAAAATAATAAATTCCGATTCGCTCTCTTAAAATCCGAAGTC
AACGCTTTATTGTGGGAATGTGATGATTGTTTCAAGACTGTCAAAATGAA
CCATCTAGCCTTGGATCGCCTCAAAGGGAACTTCCAGGCTGCACTCTCTG
AAGTCAAAACAGAAAATAACAACGCTAAAACAGCTAACGAGTTAAAAGAA
CTGAATACAGTCACAGATGAACTTCAAAAATCTGAAAATAAAATCATGGT
TCAAAAACAACAGCTAAACGAAATTGTTCCAAATATTAAATTTTGGCGGG
AAAAGAACATTGAAGGTGACGTCATCATTTGTGACGAGAACATTTCGAAA
TTGAGACATGAAGTAAATGAACAGACCAGACGAGTCGGTGATTTGTTCAA
CACCGTATCTTTCGATATCATTCACCTGAAGGAGCGAGCATACAGTGCGA
CTGGAGAAGCTAAAAACATCGGACTTCCTTTACATAAATCGCATTGAGTT
TTGCGACTGTTTCAGATTTTTTTTTTTGTACATATTATTAAGGTCTATTA
TCTTTATATTTATTATTTTAATGCAAGTTTTATTTTTAATTTGTTCTAGG
TCTTTCAATTGATTATTCCGAAATTGATGCTGAATATTTTGGGAACTTTT
TTGGATTGACCGGTTGAACCTTTAGTCTTTTGCTTTATTGATTTCAGAAA
AAAATAAAAGATAG Coding sequence (CDS) from alignment at sc0000088_pilon:279490..287103- >MSTRG.11918.12.p1 ID=MSTRG.11918.12.p1|Name=MSTRG.11918.12.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000088_pilon:279490..287103- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGCACCAAGCTGTGTTATCAAAAGAAGAGATGACGGTTTTCCAAGTC
AGTGGTGCTCTTCAATCGCACGAGAGTTACATCCGCATCATGACAGCCAT
CAATCATGCCGGACTTGAGCTCTACTTCAAAGCGTTCCATCACAGGGACG
AACTACCCGGTGGTCTTGGTCTTCCAACAGAACCGGAAAAACTTTACAAG
CATCTACAAAAACATCAATCTGAATTTGACGACCTTCGCTCCAAAGGACA
AATCACTGAAAGAGAGTATCTAACCATTTTCCCAGCTGGCAAGAAAGAGA
CTTATTCTCAGGAATTCTCATTCCCGCTTTTCCAAAAATTGTTACAAATG
TTTGACCGAGCAGGACTTGATGCGGAAACAGCAAACTCGGATGACGAGCG
AAACGTATTTTTGCAAGAAATGTCGAAATTTGAATACATATTGAAAGATA
AGAAACTGGTCAAAAAGATTAACAATTCTGATGAGACTTTCAATGAAATT
TGGGATGACGTCATTCAGATCTTGAAAAATGTCAAATATGATATAACACG
AATCGAATCCTTACGAACAAGCGATCTAGAAGAAAATAATAAATTCCGAT
TCGCTCTCTTAAAATCCGAAGTCAACGCTTTATTGTGGGAATGTGATGAT
TGTTTCAAGACTGTCAAAATGAACCATCTAGCCTTGGATCGCCTCAAAGG
GAACTTCCAGGCTGCACTCTCTGAAGTCAAAACAGAAAATAACAACGCTA
AAACAGCTAACGAGTTAAAAGAACTGAATACAGTCACAGATGAACTTCAA
AAATCTGAAAATAAAATCATGGTTCAAAAACAACAGCTAAACGAAATTGT
TCCAAATATTAAATTTTGGCGGGAAAAGAACATTGAAGGTGACGTCATCA
TTTGTGACGAGAACATTTCGAAATTGAGACATGAAGTAAATGAACAGACC
AGACGAGTCGGTGATTTGTTCAACACCGTATCTTTCGATATCATTCACCT
GAAGGAGCGAGCATACAGTGCGACTGGAGAAGCTAAAAACATCGGACTTC
CTTTACATAAATCGCATTGAATGAGAGAGGGAAAAGTCATTAAACACTTT
GTTTGGAAGTTAAGAGATTTGCACCAAGCTGTGTTATCAAAAGAAGAGAT
GACGGTTTTCCAAGTCAGTGGTGCTCTTCAATCGCACGAGAGTTACATCC
GCATCATGACAGCCATCAATCATGCCGGACTTGAGCTCTACTTCAAAGCG
TTCCATCACAGGGACGAACTACCCGGTGGTCTTGGTCTTCCAACAGAACC
GGAAAAACTTTACAAGCATCTACAAAAACATCAATCTGAATTTGACGACC
TTCGCTCCAAAGGACAAATCACTGAAAGAGAGTATCTAACCATTTTCCCA
GCTGGCAAGAAAGAGACTTATTCTCAGGAATTCTCATTCCCGCTTTTCCA
AAAATTGTTACAAATGTTTGACCGAGCAGGACTTGATGCGGAAACAGCAA
ACTCGGATGACGAGCGAAACGTATTTTTGCAAGAAATGTCGAAATTTGAA
TACATATTGAAAGATAAGAAACTGGTCAAAAAGATTAACAATTCTGATGA
GACTTTCAATGAAATTTGGGATGACGTCATTCAGATCTTGAAAAATGTCA
AATATGATATAACACGAATCGAATCCTTACGAACAAGCGATCTAGAAGAA
AATAATAAATTCCGATTCGCTCTCTTAAAATCCGAAGTCAACGCTTTATT
GTGGGAATGTGATGATTGTTTCAAGACTGTCAAAATGAACCATCTAGCCT
TGGATCGCCTCAAAGGGAACTTCCAGGCTGCACTCTCTGAAGTCAAAACA
GAAAATAACAACGCTAAAACAGCTAACGAGTTAAAAGAACTGAATACAGT
CACAGATGAACTTCAAAAATCTGAAAATAAAATCATGGTTCAAAAACAAC
AGCTAAACGAAATTGTTCCAAATATTAAATTTTGGCGGGAAAAGAACATT
GAAGGTGACGTCATCATTTGTGACGAGAACATTTCGAAATTGAGACATGA
AGTAAATGAACAGACCAGACGAGTCGGTGATTTGTTCAACACCGTATCTT
TCGATATCATTCACCTGAAGGAGCGAGCATACAGTGCGACTGGAGAAGCT
AAAAACATCGGACTTCCTTTACATAAATCGCATTGAATGAGAGAGGGAAA
AGTCATTAAACACTTTGTTTGGAAGTTAAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:279490..287103 - |
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