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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:279475..284019- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11918.10.p1 ID=MSTRG.11918.10.p1|Name=MSTRG.11918.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4545bp|location=Sequence derived from alignment at sc0000088_pilon:279475..284019- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCTTTTGTTTTGCTTGCTTGCACTCCACCCTACAGCTTCATTCATTGA
AAACAATTTACGTTAATGCTTTTACGAATTACTTGAAACTTTCGGCATGT
TTTCTATACTCTCATTATTGCTCGAAAATATCGTCGTTCAAAAAAACAAA
CTTTGTCTTTTTATGATTCTTTGCCAAATAAAGTTGCCAAGAGTAGTATA
GACCAGGCTTCAAAGACTCTTGTTTGTTAAGCAAAAAAAACGTGTTTGAT
TTACTTATTATAATGGCTAGGAAATCTTCAGGTAATAACATGAAACTAGT
ATTATACATGTTTTCGTATACTAATGAAAAATATCTGGTAAAAGTCTTGT
ATTACAGTTTGGTGAAACTCTATCGTTTTACGAATTCATGTCTTTCGTGG
AAGTTTTGTGTTTCATTAGCTAGGAAAGAAATCTGTTGGTCACTGAGTAG
GGAAAATGCAAAAAACTCGGTATTCGCTGAGACGAGGTACAGTAACGATT
TCGACTATCGACAGCTCTAACGAAGTTCCAGTGAGACTGGGAAGATTAAG
ACTATCCGAATGAACACTTTCACTATAATAACTATTATCTTTGACTCTTT
TTTGAACCTTCAGTGCCTGCTTTTTAATGATTTTCCGACCCCTAGTCCCT
TCTAAAAACTAAACAAATATGCCCTCTTTGTATCCTTTGCTCTGAGCTTA
AAACTGTCTGTCTGTCTGTTTGAGCTTAAAAGTCTGGATCGTCGGTAGAG
ATACTAATGCTTTCTAGCTTCAAATCACTGGATTAAAATGATCAATTTGA
CCTCCTTGGCTTAGAGTTGTGTGAACATACAAAACGATGAATTCGTCTCT
TGACCGTTGTGTTTTGAAGTACACGTTTTTTTTTTTATTAGAACACCTAA
AATTTGGCTGAGCCTGGATGTGCTTATTTTTTTATCAATTTTCAGCCTAG
AATGTTCTTAAATGCGTTCTTAATTTTTCAGACTACTCTAAATCGACAAT
ATGATACAAAATAAAGAGCACTTAAATTTGGCAAAATATTTGACTCTCGA
CTTTTGAAGATCCACCCCTAAATTCAGTTAAAACTGCTTAAAAAGAGGAA
AAAATTGTAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCATGTTC
TTAAGATGTTCTTAATTTTCGACGAATTTCAGCCTATATGTTCTTATAAA
CTAGGTTCTAATAAAAAAAAAAACGTGTAAATCTTTCAGATGCTGATTCA
GCTTTATCAATGGTTGCCATAGTAACACATTGATGACGTCATTATACAAG
TTGATTTATGAGAGAATTTTAGTTTAAATATTTATGGAGAATAGTATACA
AAAAGTTTTTAATTCAATTCAAAAATGAATTCAAAAATGTTTTTATTGTA
GATTTGAGAGTACTAAAACGGTTTTATTGAGGAAATCCACAACAGCTTCA
TAAAGAAGTTTGTATTTTTTGCGTTTTGACTTTCCTGGCTTTTCGTGGAA
GCACCTGAAAGATTTCGAGATAGAGTCGTTTGCTGGGAGTGTTATATAGA
ATAATTGAGAGCGAAGCATCGAGGGTATGTTCACATCTTGTTCTCAATAC
TTTTGGTAATCTTTCAGTAAAGATAGTACTGTACACTACAAAATACAAAT
TCAATGTGCATAGATGATTTATAAAAGGCCCCAGTACCAAATTACCTCAT
CTTCAGTAATTTTTATTCGTCCTCCCAATATACTTCTTCCCTTTGGAAAT
GTGAAAATAACAAATATCAGTTGATTGGTCATTTCTATAGAAGTATATTG
CGCTCTTGATGATATCGTGTTGTTATGAATGAACTGTTCTAAGCACATCC
CATTTCGACTATCTTCTAGTATTTTCTCCCTCCTCCCTCTTTGACTGTAA
GAACAAAATTTTTTCTGTTCAATATAATCAAGACTTTCATTGACAAGGTT
CAGTTGGTTGTATGTGGTGATTAGTACACGTTTTTTTTATAATAGAGCAA
ACTATACGAGAACATAAGGCTTTGTGGACTCAAAAACACCCGTTTTCTGA
GCAAAATGGGTAAAAATGGTTACGAAATGGTGATTTTAAGAACATTTTTA
GGCTTGAAACCCAAAAAGTCAAGAACATCCCAAAGCTTTAAAAAAACGTG
TATTCCATGTCGAGTTGTATAAGTCCATTTATTCGAATATTTGTTACTTT
TATTTTGGCAAACGAATATAAATGTAAGAAACAAAAGATATCACAGTTTC
TTATAAAAAACTTTCTTTGTATGTATATCCCACTTTCTTGTATAAACAGG
ACAATACTTCAAAGTTAATTACTTCCACCTTCGAAATAACTGAAATCAGC
ATTCTAAAAAACCTAATTGTCAATTATACGTATATCGTTTTCATTAACAA
AATTAACAGCATAAACGAGGCTATTACAAACTGACGTATTTGTAAACTTT
TTTAATCTCTACCAATTTTGAACAGAGCAGTTCATATCATCAATCTTAAG
TCGGCGTGTGAGAGAAAGTTGATGTCAAAATCTTTATTGGATTTTTGTTG
TAAATCAGTTCAAGGCTTCACTCACTGTGCTGAATTTTTGTTATGTTTTG
AAATCAAGAGAAAGAGAAAGTTATTTCATGCTGAAAACTTGCTAAGAAAC
AGGAAAAGTTTTGCTGGTTATGTCAAAATTGCACTTTCCATTTAAGTTAT
GGTAATTGAAAGTTGTTGATGTCATTTTAAATTCCTGGAAGAAAGAAATT
TGGTGATACCCACAATAAGTGTTGTATTTTTGTCAGTAAGGTCAATACGT
TGTTTTTTGTTTTCGGTGGTGGAACGGTAGTTTAGTTTTGATGAGAAAAG
TTGTGTACTTGACCTCTGTAAATCCTTAAGGTGAGGTGTTTGGTACAAGC
TCAATCAATATTTTTAATTTTATTCCTTTAAGAGATAAATAACTCCTCTT
GTATTATACATTTGGGAAGTAAGCAATTCGATACATACACCCTGTAAGGG
GTTATAACGTTGTAAAACTCGAGCCTCTTCATGTCCATATTAAAGGAGTC
GAATTATGGAAGATTTGCCGAATGATACTCTATAATTCGAACTTGAACGG
GATATCTTATTTGTTCGAATTACAGAGATATTCGGATAGTAGAAAGTTTC
TCCTTGTGTCTGGGACTGGGACATAAGTTCGAATAAGGGAGTCTACTGTC
TACTGTATAAAAATGTCAAATTTTGTTGCTTTTTATTTTGTAGATTTGCA
CCAAGCTGTGTTATCAAAAGAAGAGATGACGGTTTTCCAAGTCAGTGGTG
CTCTTCAATCGCACGAGAGTTACATCCGCATCATGACAGCCATCAATCAT
GCCGGACTTGAGCTCTACTTCAAAGCGTTCCATCACAGGGACGAACTACC
CGGTGGTCTTGGTCTTCCAACAGAACCGGAAAAACTTTACAAGCATCTAC
AAAAACATCAATCTGAATTTGACGACCTTCGCTCCAAAGGACAAATCACT
GAAAGAGAGTATCTAACCATTTTCCCAGCTGGCAAGAAAGAGACTTATTC
TCAGGAATTCTCATTCCCGCTTTTCCAAAAATTGTTACAAATGTTTGACC
GAGCAGGACTTGATGCGGAAACAGCAAACTCGGATGACGAGCGAAACGTA
TTTTTGCAAGAAATGTCGAAATTTGAATACATATTGAAAGATAAGAAACT
GGTCAAAAAGATTAACAATTCTGATGAGACTTTCAATGAAATTTGGGATG
ACGTCATTCAGATCTTGAAAAATGTCAAATATGATATAACACGAATCGAA
TCCTTACGAACAAGCGATCTAGAAGAAAATAATAAATTCCGATTCGCTCT
CTTAAAATCCGAAGTCAACGCTTTATTGTGGGAATGTGATGATTGTTTCA
AGACTGTCAAAATGAACCATCTAGCCTTGGATCGCCTCAAAGGGAACTTC
CAGGCTGCACTCTCTGAAGTCAAAACAGAAAATAACAACGCTAAAACAGC
TAACGAGTTAAAAGAACTGAATACAGTCACAGATGAACTTCAAAAATCTG
AAAATAAAATCATGGTTCAAAAACAACAGCTAAACGAAATTGTTCCAAAT
ATTAAATTTTGGCGGGAAAAGAACATTGAAGGTGACGTCATCATTTGTGA
CGAGAACATTTCGAAATTGAGACATGAAGTAAATGAACAGACCAGACGAG
TCGGTGATTTGTTCAACACCGTATCTTTCGATATCATTCACCTGAAGGAG
CGAGCATACAGTGCGACTGGAGAAGCTAAAAACATCGGACTTCCTTTACA
TAAATCGCATTGAGTTTTGCGACTGTTTCAGATTTTTTTTTTTGTACATA
TTATTAAGGTCTATTATCTTTATATTTATTATTTTAATGCAAGTTTTATT
TTTAATTTGTTCTAGGTCTTTCAATTGATTATTCCGAAATTGATGCTGAA
TATTTTGGGAACTTTTTTGGATTGACCGGTTGAACCTTTAGTCTTTTGCT
TTATTGATTTCAGAAAAAAATAAAAGATAGAGAATTTTGTATAGA Coding sequence (CDS) from alignment at sc0000088_pilon:279475..284019- >MSTRG.11918.10.p1 ID=MSTRG.11918.10.p1|Name=MSTRG.11918.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2178bp|location=Sequence derived from alignment at sc0000088_pilon:279475..284019- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGCACCAAGCTGTGTTATCAAAAGAAGAGATGACGGTTTTCCAAGTC
AGTGGTGCTCTTCAATCGCACGAGAGTTACATCCGCATCATGACAGCCAT
CAATCATGCCGGACTTGAGCTCTACTTCAAAGCGTTCCATCACAGGGACG
AACTACCCGGTGGTCTTGGTCTTCCAACAGAACCGGAAAAACTTTACAAG
CATCTACAAAAACATCAATCTGAATTTGACGACCTTCGCTCCAAAGGACA
AATCACTGAAAGAGAGTATCTAACCATTTTCCCAGCTGGCAAGAAAGAGA
CTTATTCTCAGGAATTCTCATTCCCGCTTTTCCAAAAATTGTTACAAATG
TTTGACCGAGCAGGACTTGATGCGGAAACAGCAAACTCGGATGACGAGCG
AAACGTATTTTTGCAAGAAATGTCGAAATTTGAATACATATTGAAAGATA
AGAAACTGGTCAAAAAGATTAACAATTCTGATGAGACTTTCAATGAAATT
TGGGATGACGTCATTCAGATCTTGAAAAATGTCAAATATGATATAACACG
AATCGAATCCTTACGAACAAGCGATCTAGAAGAAAATAATAAATTCCGAT
TCGCTCTCTTAAAATCCGAAGTCAACGCTTTATTGTGGGAATGTGATGAT
TGTTTCAAGACTGTCAAAATGAACCATCTAGCCTTGGATCGCCTCAAAGG
GAACTTCCAGGCTGCACTCTCTGAAGTCAAAACAGAAAATAACAACGCTA
AAACAGCTAACGAGTTAAAAGAACTGAATACAGTCACAGATGAACTTCAA
AAATCTGAAAATAAAATCATGGTTCAAAAACAACAGCTAAACGAAATTGT
TCCAAATATTAAATTTTGGCGGGAAAAGAACATTGAAGGTGACGTCATCA
TTTGTGACGAGAACATTTCGAAATTGAGACATGAAGTAAATGAACAGACC
AGACGAGTCGGTGATTTGTTCAACACCGTATCTTTCGATATCATTCACCT
GAAGGAGCGAGCATACAGTGCGACTGGAGAAGCTAAAAACATCGGACTTC
CTTTACATAAATCGCATTGAATGGCTAGGAAATCTTCAGATTTGCACCAA
GCTGTGTTATCAAAAGAAGAGATGACGGTTTTCCAAGTCAGTGGTGCTCT
TCAATCGCACGAGAGTTACATCCGCATCATGACAGCCATCAATCATGCCG
GACTTGAGCTCTACTTCAAAGCGTTCCATCACAGGGACGAACTACCCGGT
GGTCTTGGTCTTCCAACAGAACCGGAAAAACTTTACAAGCATCTACAAAA
ACATCAATCTGAATTTGACGACCTTCGCTCCAAAGGACAAATCACTGAAA
GAGAGTATCTAACCATTTTCCCAGCTGGCAAGAAAGAGACTTATTCTCAG
GAATTCTCATTCCCGCTTTTCCAAAAATTGTTACAAATGTTTGACCGAGC
AGGACTTGATGCGGAAACAGCAAACTCGGATGACGAGCGAAACGTATTTT
TGCAAGAAATGTCGAAATTTGAATACATATTGAAAGATAAGAAACTGGTC
AAAAAGATTAACAATTCTGATGAGACTTTCAATGAAATTTGGGATGACGT
CATTCAGATCTTGAAAAATGTCAAATATGATATAACACGAATCGAATCCT
TACGAACAAGCGATCTAGAAGAAAATAATAAATTCCGATTCGCTCTCTTA
AAATCCGAAGTCAACGCTTTATTGTGGGAATGTGATGATTGTTTCAAGAC
TGTCAAAATGAACCATCTAGCCTTGGATCGCCTCAAAGGGAACTTCCAGG
CTGCACTCTCTGAAGTCAAAACAGAAAATAACAACGCTAAAACAGCTAAC
GAGTTAAAAGAACTGAATACAGTCACAGATGAACTTCAAAAATCTGAAAA
TAAAATCATGGTTCAAAAACAACAGCTAAACGAAATTGTTCCAAATATTA
AATTTTGGCGGGAAAAGAACATTGAAGGTGACGTCATCATTTGTGACGAG
AACATTTCGAAATTGAGACATGAAGTAAATGAACAGACCAGACGAGTCGG
TGATTTGTTCAACACCGTATCTTTCGATATCATTCACCTGAAGGAGCGAG
CATACAGTGCGACTGGAGAAGCTAAAAACATCGGACTTCCTTTACATAAA
TCGCATTGAATGGCTAGGAAATCTTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000088_pilon | genome | sc0000088_pilon:279475..284019 - |
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