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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:112424..114796+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11905.2.p1 ID=MSTRG.11905.2.p1|Name=MSTRG.11905.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2373bp|location=Sequence derived from alignment at sc0000088_pilon:112424..114796+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTAGGCATCCCATTTTCAagcattcgaatgttttgtaaacAAAGTTAGG
AAATGGCCACCGTACTAACCGTACGTACGTACACGTTATGGTGAGCAAAT
AAGAACTtacattaaaaatcaataaaacagtttttttttcacaccgttta
tgacctggtttttttcgacaactgtatttcgttttttctttcGATGGTTG
CAATATACATCGAACATTTGTCTAAATGTAAAATGGTTTTCAATCACCAA
CCAGTAATTTTGGATTGTGTTTTTGATGCTCATTTTTAGATAGAACTTTC
TTTTTACTTGCATACATTCAGGTATTTGAAGCACATGATACACTTCAAGA
ATAAAGCActaaaagtctttttcaaacaAGAAATCGACCCTGGCTCCGAA
AATTTACGgtaaatattttatgttcttatCTGTAATTGTATCGTACATGA
TTCAGAGACAGTAAGTGTAAACTAGCCCGGgggctttttgatagacttgg
TGGCGCTTATAAAAGTGGCCCGTCGTAATATGGTGAactttatttttggg
ttttgcTTGTGCACACAGCAAATCCataccactagatccagtcccttttt
agGAGAAAAACACGAGAGAATAATTAATAGCTAAGTGaccattttctttc
aaagttgGGATGTATTATGTGTTTTTATgatagttttttaaattctaatg
ttgtttttgaaatataatttatCGTTTCGCAGCGTTTCGGTGTTTTCATA
TaactttcgaaaacaaaagtggaaattttgataattacGGACTCCCCTAC
tgtagtctacttcactggacttgGGCGCTATTACattcaaaatcatcaga
aaataAAGTTCAGTCAGAACTAGAATCTTAATGTATTTCCATGTTGTATT
GTTTAGCTTCGCCGAGATGAATATTGAAGGAACAATCAAAGATGGTCTGC
AGAGTAAATCCATACTGGAGTATCCTGTCTTCTATCTCGTCCTCGCAGAA
AACGTCCAACAGTTTCGTGAAGAACCCTACCTGCAAGGTAtaaaacacgt
tttttatcTTGGAtagtattcttacttttttagggAAGATCATTCTTAAC
GTTATGATCTAACCTAGATTTAACACACAACTAAACGctaaagcataaaa
tggcatttctGTAAGATAATTgtcaatctacaggttaaaatgctctaaaa
gtggaatacacctttcccgtaattcgtaaaactaatgcgcgcgcattagt
ttgATGCTCTCcgccgtttggtctctggaggtaaacaaacctgtttttgc
ctgcgtttccttagggaaagttggttttttgagcttttcttaagttctgt
cgaacaaaatcccctcaaattttagtatgttcaatctattcatgatatta
taccaccctgaaaatcttttgccaaaagaagatcgctatcaaaagttaga
agctgaaaacccactttccctaacccctcgcaggcgttcatttacctccc
aaacaattttatacacatcGGTGGAGTGCACATtatcccgggccatttct
gagaagtttgaattacgggaaagttgtattcttaggttcagttgccaaat
ccATGATGAAAACGTCGCGATATTCCTAgcatattcttgattttttgcca
atttcatcatgaaccGTCATGAACATTTTTATTGTGTCTCACAGGCACAT
TAGGATAAAAATGTGATCCTCGACTAAAAAATTTAATCAGTACGTCAACT
TTCAATTCAGTTCCAGCGAGTGATAGCGACGAGGAAGAAGTAATTGAAGA
GaaaacacaacaacaacaactacgGCACAATATGAATCCTTTCAACAACA
CTatcatcaaacaagaaaaacacAGTGACGACGAATCAGACGATGACGTC
ACAAGACCTGTTGCTAAGCAACGTAGACTTGATGTCACGTGACAATAACG
TCGTGAGTCATTGTTATTGTAATTGttggtttattttttttacttgatgg
TAATTAATATGGTAAATAAGAGTTTAAACTGAAGAGTTccaaaaatgaat
ttctaaCGAGAAAATGTTATTTCGTTTTTACCCTTAACACgacctctttt
ttttttaatttgattatttcgcTCGATAGTGCTCGTGAACGTGCatgcca
gaaaaaaattttgaactcTGCCGACTTTTTTATCCGGCCGAACCGGGCTC
TTTGAAATAGTGAGAAAAAATGACAACGACTTGCAATCAAATAGGAAAAA
CTAAGGTTATTTAgactttcttaaatttttctcaGTTCTTGGTTATGACA
TTGAAAGTCTTTAAAACAGCTTTGAATTTCGCCTGAAAACCAAAAAGAGG
GATATCCCAAGAATATCAACTTA Coding sequence (CDS) from alignment at sc0000088_pilon:112424..114796+ >MSTRG.11905.2.p1 ID=MSTRG.11905.2.p1|Name=MSTRG.11905.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000088_pilon:112424..114796+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCACCGTACTAACCGTACGTACGTACACGTTATGGTATTTGAAGCA
CATGATACACTTCAAGAATAAAGCActaaaagtctttttcaaacaAGAAA
TCGACCCTGGCTCCGAAAATTTACGCTTCGCCGAGATGAATATTGAAGGA
ACAATCAAAGATGGTCTGCAGAGTAAATCCATACTGGAGTATCCTGTCTT
CTATCTCGTCCTCGCAGAAAACGTCCAACAGTTTCGTGAAGAACCCTACC
TGCAAGTTCCAGCGAGTGATAGCGACGAGGAAGAAGTAATTGAAGAGaaa
acacaacaacaacaactacgGCACAATATGAATCCTTTCAACAACACTat
catcaaacaagaaaaacacAGTGACGACGAATCAGACGATGACGTCACAA
GACCTGTTGCTAAGCAACGTAGACTTGATGTCACGTGAATGGCCACCGTA
CTAACCGTACGTACGTACACGTTATGGTATTTGAAGCACATGATACACTT
CAAGAATAAAGCActaaaagtctttttcaaacaAGAAATCGACCCTGGCT
CCGAAAATTTACGCTTCGCCGAGATGAATATTGAAGGAACAATCAAAGAT
GGTCTGCAGAGTAAATCCATACTGGAGTATCCTGTCTTCTATCTCGTCCT
CGCAGAAAACGTCCAACAGTTTCGTGAAGAACCCTACCTGCAAGTTCCAG
CGAGTGATAGCGACGAGGAAGAAGTAATTGAAGAGaaaacacaacaacaa
caactacgGCACAATATGAATCCTTTCAACAACACTatcatcaaacaaga
aaaacacAGTGACGACGAATCAGACGATGACGTCACAAGACCTGTTGCTA
AGCAACGTAGACTTGATGTCACGTGAATGGCCACCGTACTAACCGTACGT
ACGTACACGTTATGGTATTTGAAGCACATGATACACTTCAAGAATAAAGC
ActaaaagtctttttcaaacaAGAAATCGACCCTGGCTCCGAAAATTTAC
GCTTCGCCGAGATGAATATTGAAGGAACAATCAAAGATGGTCTGCAGAGT
AAATCCATACTGGAGTATCCTGTCTTCTATCTCGTCCTCGCAGAAAACGT
CCAACAGTTTCGTGAAGAACCCTACCTGCAAGTTCCAGCGAGTGATAGCG
ACGAGGAAGAAGTAATTGAAGAGaaaacacaacaacaacaactacgGCAC
AATATGAATCCTTTCAACAACACTatcatcaaacaagaaaaacacAGTGA
CGACGAATCAGACGATGACGTCACAAGACCTGTTGCTAAGCAACGTAGAC
TTGATGTCACGTGAATGGCCACCGTACTAACCGTACGTACGTACACGTTA
TGGTATTTGAAGCACATGATACACTTCAAGAATAAAGCActaaaagtctt
tttcaaacaAGAAATCGACCCTGGCTCCGAAAATTTACGCTTCGCCGAGA
TGAATATTGAAGGAACAATCAAAGATGGTCTGCAGAGTAAATCCATACTG
GAGTATCCTGTCTTCTATCTCGTCCTCGCAGAAAACGTCCAACAGTTTCG
TGAAGAACCCTACCTGCAAGTTCCAGCGAGTGATAGCGACGAGGAAGAAG
TAATTGAAGAGaaaacacaacaacaacaactacgGCACAATATGAATCCT
TTCAACAACACTatcatcaaacaagaaaaacacAGTGACGACGAATCAGA
CGATGACGTCACAAGACCTGTTGCTAAGCAACGTAGACTTGATGTCACGT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:112424..114796 + |
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