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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:1231936..1234844- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11884.1.p1 ID=MSTRG.11884.1.p1|Name=MSTRG.11884.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2909bp|location=Sequence derived from alignment at sc0000087_pilon:1231936..1234844- (Clytia hemisphaerica_ch_hm2_pilon)
AAAACAATTTTCAAATAGATGTCAAAGAATCTGGAGTAGTTCATTAATCA
TCGAAAGAGTAAGTCAAGCCTTAGCACCTTATTTAAAGAAAGACAAACTT
TAGAGGCCCTGTTCTTTGTTTGTTTAGGTACTCCTAAGGGTTACTTCAGC
ACGCAAAAATTCGTTGGAATTCTTCCAACAAGTTTTCAAGGAAAATCGGA
TTTAGTTTAAAAGCTTCCAAAAAATCACTTCATCAAATTCTAAATACAAT
ACATGCAAATATGATTGCTTTTGTTGGTACACATAAAGTGTAACCTATAT
ATTCTTTGTTCATCAGATCTCGAGTTTGCTTGTGGATTAGCAGTTGCTTA
ATAAATGATATTTTGCTTGCATGCAAACTCCTTCAAGCCGCGTTCAACTT
TATTATATAAATTTGTCACAAAAAGGGATGTTTACTTTTCACGTTTCATA
TGTTTCAATTACGGTTTAAAGTAGCTTGGTTCGTTTAAACTTATACACTT
TTCAGATTTAATCAGATGCAAAAACTAGATTTCATTGCGATATAAAGAAT
TGAAATACACAATGTCACTTGTAAAGGTATGTATGTGAATGATACTTAAT
TTCCATATTCTCCCTTTTTTCTGACAGATATTTTTCAAAACCTTCAGGTC
TTTATCCACTGGAAAGATTCGTTTTCATTCTGATTGAGAAAACTCCGAAA
GTTTAACCCATTGTAATACTGTACTTAGCTGTCACACTCATCAGGAGAGG
CTGTGTGGTTGTAACTCGGGAGGGGGGTACTAGGTTTGCGAGTTGACGGG
TACTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGCGAGGACGAAA
AATCGCGAAATTCACGACATTTACTTTCGCGAATTTAACGGAAAAATATA
TTTCGCGAGCATAAACTTTCGCGAATCAAGACGTAGAATTGAGAATTTTC
ACATGAAAAAATGGCTTAGAGGGACAAATACTTCTTGGATTGGCTTGAAA
CATTTGTCCTTTGACTTATTAGTCTCACAGCAGGCAAAAAAGTGCCATAA
AAGTTACATTTTATTCAAAGTTTGAAGATTTACAAATTATCTACTTTGTC
AAGAATTTTTCGCGAGCATAAACTTTCGCGAATGGCCCTTCCTAGAATTT
TTAAATACATTTATTTTCGCGAAAAGGGCCAAAATTCGCGAAAATCGCGA
AAGTTTCTGCTCGCGAAAGTTTCTACGCCTAAAGTATGTCCGAGCAAAAA
ATCGAAAATCGATACCCTTAGAGAGGGGAAAAACTGGCGTTTTTGGGACT
CTTAGAGTTTCGAGGGTGTAAGAAAGGGACCCTTATGGCTAGCACATATC
TGCGGCACCCATTTTGCCTAAGTACCCCCCCCCCCCGGGATTGTAAGAAG
AATCCCTACTTGACTTTTGAGATAAACATATACAGTGATCTCGCTAATTG
GAACTAGAACGGAGAATTTTATATGTTCAAATTACAGAGAGATTTGAATT
ATGGAAAGGAATAAGTTCAAATTATAGAAGAATTCGAGTGATAGGCAGCT
CTAACCAGGTCACAGAGGCAGGGGAGCTCTATGGAATGAATAAAGGAGAT
GTGAACTTTGGTTGTGTTACTGCCAATGTCGAGTATTCAAATATGAATAT
GTAAAAGATTAATAAAAGTTAGTCTAATATACCCCTAGTTTTCAATCTGA
ATCATAAAATTTCAAATTATTATCCTCAACATATGTTTTAATTGCATTTT
AACTTTATAGCATCCATTACAACGACGCAGCTCTTCCAAACTCAGTGTTG
CTAAAATCGAGAGTGTATCATTATCACATGGTCATAAGAAAGATGATTCG
AGTCTTTTTCACGTCACCAACAGTTTATTACCGACGACGACCAAAATTAA
GAAAATCCGACGTCGTACGACAGAAGAGGATCTCGAAAATCACAGACACG
AACATTTAAAGAAAGGTTTATTAATGGTTCACAGTAATGAAAGTATCTTT
TCTTCATCTTCCTTACCTGATACAGATCCTCATGACTTGATGCGCGATTA
TCTTGGCCGCCGACGTCGCTCGAACACCTTACCTGAACCAGTAGGTCCTG
TTCTATTAGCGCCCGTTTCGCTGTTGACCGCTCACCAAAAAACAAGAAGT
CATGAATTTTCGACCACGTCATCAGCAGCAGTTGACGTAATATCACGTAA
AGAATTTTCATCTTCGACAGAAAAAATCAAACCCATAAGTTTAAACATCG
AACGTAAATCTAAGAGTGTGAAAAAACTACGCGAGTTAGTTGGAAAAGTG
TTACGTAAAAATTTAGAACATTGTCGATATGATGCTAAAAAGTCGCGCAA
AAGGTGTACACATTTGAGTCAGATATTAGAAACGACACTGAAATCAAGTT
TAAATTCTGGTGAGTTTGAATATAAAGTCGTGGCTTTGGTTTATATCGGG
GAATTTCGGGATGACGGTATGAAGCAGTCGTGTCAATATTTTTGTAATCC
GGTATCCGATTTATGTGTGATGGAGCACTATCGGGGTGAAGATATGTTTG
CGACAGGGATTGTCTTCGCGACGTTAGTGGAGAGTCAAAAACAATACTTG
GTACCTTCTTATAATAACCTGCAATCGTCGAGACGAGACCCTGTAATGGT
TTAGCTTGGTGATTGGATATCAAAAGAGGCAAACTTCAAACAGGTCATAT
ATCAGGAATTTGTTCAGACGTGTTTAAGTAAAAGGAGGGAGGACACAATT
TTGCAAAAGACGTTGTATAAAAACCTTACTTAAGGGAGCTAATTTTGAGG
AGAACCATTTTTTGACGAAATTTGCCAAAACTTTTGGCAAATCTATTGTG
AATGTTTTTAGATTTCGAAATTTCCTAATACATGTTTCTGCCCCTATATC
AGGCTCGCA Coding sequence (CDS) from alignment at sc0000087_pilon:1231936..1234844- >MSTRG.11884.1.p1 ID=MSTRG.11884.1.p1|Name=MSTRG.11884.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000087_pilon:1231936..1234844- (Clytia hemisphaerica_ch_hm2_pilon)
CATCCATTACAACGACGCAGCTCTTCCAAACTCAGTGTTGCTAAAATCGA
GAGTGTATCATTATCACATGGTCATAAGAAAGATGATTCGAGTCTTTTTC
ACGTCACCAACAGTTTATTACCGACGACGACCAAAATTAAGAAAATCCGA
CGTCGTACGACAGAAGAGGATCTCGAAAATCACAGACACGAACATTTAAA
GAAAGGTTTATTAATGGTTCACAGTAATGAAAGTATCTTTTCTTCATCTT
CCTTACCTGATACAGATCCTCATGACTTGATGCGCGATTATCTTGGCCGC
CGACGTCGCTCGAACACCTTACCTGAACCAGTAGGTCCTGTTCTATTAGC
GCCCGTTTCGCTGTTGACCGCTCACCAAAAAACAAGAAGTCATGAATTTT
CGACCACGTCATCAGCAGCAGTTGACGTAATATCACGTAAAGAATTTTCA
TCTTCGACAGAAAAAATCAAACCCATAAGTTTAAACATCGAACGTAAATC
TAAGAGTGTGAAAAAACTACGCGAGTTAGTTGGAAAAGTGTTACGTAAAA
ATTTAGAACATTGTCGATATGATGCTAAAAAGTCGCGCAAAAGGTGTACA
CATTTGAGTCAGATATTAGAAACGACACTGAAATCAAGTTTAAATTCTGG
TGAGTTTGAATATAAAGTCGTGGCTTTGGTTTATATCGGGGAATTTCGGG
ATGACGGTATGAAGCAGTCGTGTCAATATTTTTGTAATCCGGTATCCGAT
TTATGTGTGATGGAGCACTATCGGGGTGAAGATATGTTTGCGACAGGGAT
TGTCTTCGCGACGTTAGTGGAGAGTCAAAAACAATACTTGGTACCTTCTT
ATAATAACCTGCAATCGTCGAGACGAGACCCTGTAATGGTTTAGATGTCA
CTTGTAAAGCATCCATTACAACGACGCAGCTCTTCCAAACTCAGTGTTGC
TAAAATCGAGAGTGTATCATTATCACATGGTCATAAGAAAGATGATTCGA
GTCTTTTTCACGTCACCAACAGTTTATTACCGACGACGACCAAAATTAAG
AAAATCCGACGTCGTACGACAGAAGAGGATCTCGAAAATCACAGACACGA
ACATTTAAAGAAAGGTTTATTAATGGTTCACAGTAATGAAAGTATCTTTT
CTTCATCTTCCTTACCTGATACAGATCCTCATGACTTGATGCGCGATTAT
CTTGGCCGCCGACGTCGCTCGAACACCTTACCTGAACCAGTAGGTCCTGT
TCTATTAGCGCCCGTTTCGCTGTTGACCGCTCACCAAAAAACAAGAAGTC
ATGAATTTTCGACCACGTCATCAGCAGCAGTTGACGTAATATCACGTAAA
GAATTTTCATCTTCGACAGAAAAAATCAAACCCATAAGTTTAAACATCGA
ACGTAAATCTAAGAGTGTGAAAAAACTACGCGAGTTAGTTGGAAAAGTGT
TACGTAAAAATTTAGAACATTGTCGATATGATGCTAAAAAGTCGCGCAAA
AGGTGTACACATTTGAGTCAGATATTAGAAACGACACTGAAATCAAGTTT
AAATTCTGGTGAGTTTGAATATAAAGTCGTGGCTTTGGTTTATATCGGGG
AATTTCGGGATGACGGTATGAAGCAGTCGTGTCAATATTTTTGTAATCCG
GTATCCGATTTATGTGTGATGGAGCACTATCGGGGTGAAGATATGTTTGC
GACAGGGATTGTCTTCGCGACGTTAGTGGAGAGTCAAAAACAATACTTGG
TACCTTCTTATAATAACCTGCAATCGTCGAGACGAGACCCTGTAATGGTT
TAGATGTCACTTGTAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:1231936..1234844 - |
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