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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:1066213..1068062- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11875.1.p1 ID=MSTRG.11875.1.p1|Name=MSTRG.11875.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1850bp|location=Sequence derived from alignment at sc0000087_pilon:1066213..1068062- (Clytia hemisphaerica_ch_hm2_pilon)
AGGAGATGCAACCGTCCTTGTAGAAAAACATTAAGGTTACGAGAGGGGAC
AATATTTTCTAACTGGAGGCGAGTCAGCTTATCTAATCTGTTCTTCATAA
TGTACTTATGGTCAGAAAAGATCAGTTGCGCACGGACCACTGCAATTGTT
AATGTGAAGAAAGACCATGTCATTGCCATGTATCAACTGTTACGGGAGGT
GTGTATGTACTACCTCCAGCGCAACCCAATCAGGGTCGGTGGCGGCGGTG
CTCATTTCGTGGTTCAAATTGACGAAAGCCAATTTCATCACAGGCAAAGA
GTAAGTCTTCACTTGAAATTTCATAGGTTTAGTGTACTTGGAGGTGCGTA
ACCATGCTTCATTGATTTTGGTTAATTACCTGCCGCAATAAAAATTGCAA
CAACTCCTTTCTTGGACACAGTAAGTGTTCTACGTACACGACCAAGGGCG
TAAAAAGGTTTATAATTTGGATTCGTTCATGACTTATTACGAATTAGAAA
TTTTGAGTTTAACTTTTCATTGACTCGTCATTTATGAAAGTATCTTGTTT
TAGGGAGGAGTTGGCCGTGTTGCACAAGCTCCAGTATGGGTCTTTGGTTT
AGCAGACACGAGGTTTGTTCCTGCTAAGGGATATATGGCGATCGTACCTA
ATAGAAACCGCAGGACGTTAACAGCAATAATCAATCAAGTTCTAAACGCC
AACTCGATAATTCACAGCGATCAGTGGCGTGCCTATATTAACCTGCCACA
ATTTGTTCAAAATTGTGTTGGTCACGAAACGGTCAATCACACGAACCATT
TTGTTGATCCACTGACAGGAGCTCACACTCAGGTAATTTTGATATTGCAA
AATGTGAAATACTCTGATTTTCGCAAAACTTTAGTGCTACGATTTCTTTT
TATTTTAGAAAATCAATTTTCATTGTTAACACCTTTAAAAATTAGTCCCC
TTATGGTGTTTTCCAGCACACTTTTAGTATCAAAGACGTATTCATCCAAT
TCAGCTCAGGGTGTTTATAACGTCCACTTAGATTTTCTGATCAAAATTTG
TACAATTTTCCTCAGTAATGGGACAAATCTTATCTGTCATTCTTTGTCAT
CCCTTGTCAGAAAAAACATGAATTTTTTAAATTGTTAATTTTAGAATATT
GAATCCTATTGGAACCGTTTCAAGCTTAAGATCAAGGCAATGAAGGGAAT
CAGGCGCGCAGACCTCCAAAGCTACATGGATGAGTTCATGTGGAGGTAAG
TTACCTATTGTTCATTACATTGACCGAGGAGGTATTCTTTGAGATTTTTT
TCATTATTCTAGGATTTTGAGATTTTTGGGGATTTTTGTGATATTTTAGG
ATTTTTGGGATTTTCGGAAAAGTGAATTAATTTTTTCCAGTGATTTACCC
CTCGATATTTACCTGTGTCTTGACTCATATGACCGCAAAAAGGGGATTAT
TCGAAATTTTGCTGATTCTACTGTGTTAGTATTAGCTCATTCTTCCAATT
TATTTCCGGGACATTGTTATTCCAATTCTCGGCTTTTAAGTCCCCCCACC
CTCTCTAGACGCAATTGTTTTTTTATTCTTTCAGTTTGGGTTTTCTCGGT
TGCAAGGCTACTCTTGCTAGGTCAGGTTGATTTTTTACAGCTTAAAACTT
TGCAGCTCGGTGATAGAAATTTTTTGTAATCGGAGTTTTTCTTCGGATGA
TACATACTGTACTCATACCAAAGGGTATCTTGAATTGACGAAAAATTATT
GATTTCCTCTCGCCTTCTTTTAGAGATTGGTATGGTCTTGATCAGCCTCT
GGATAACATTATTGCAGGAATTAATCATGACTACCCTCAAACTTGACAAC
Coding sequence (CDS) from alignment at sc0000087_pilon:1066213..1068062- >MSTRG.11875.1.p1 ID=MSTRG.11875.1.p1|Name=MSTRG.11875.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3012bp|location=Sequence derived from alignment at sc0000087_pilon:1066213..1068062- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTGGTATGGTCTTGATCAGCCTCTGGATAACATTATTGCAGGAATTA
ATCATGACTACCCTCAAACTTGAAATATTGAATCCTATTGGAACCGTTTC
AAGCTTAAGATCAAGGCAATGAAGGGAATCAGGCGCGCAGACCTCCAAAG
CTACATGGATGAGTTCATGTGGAGGGAGGAGTTGGCCGTGTTGCACAAGC
TCCAGTATGGGTCTTTGGTTTAGCAGACACGAGGTTTGTTCCTGCTAAGG
GATATATGGCGATCGTACCTAATAGAAACCGCAGGACGTTAACAGCAATA
ATCAATCAAGTTCTAAACGCCAACTCGATAATTCACAGCGATCAGTGGCG
TGCCTATATTAACCTGCCACAATTTGTTCAAAATTGTGTTGGTCACGAAA
CGGTCAATCACACGAACCATTTTGTTGATCCACTGACAGGAGCTCACACT
CAGAGGAGATGCAACCGTCCTTGTAGAAAAACATTAAGGTTACGAGAGGG
GACAATATTTTCTAACTGGAGGCGAGTCAGCTTATCTAATCTGTTCTTCA
TAATGTACTTATGGTCAGAAAAGATCAGTTGCGCACGGACCACTGCAATT
GTTAATGTGAAGAAAGACCATGTCATTGCCATGTATCAACTGTTACGGGA
GGTGTGTATGTACTACCTCCAGCGCAACCCAATCAGGGTCGGTGGCGGCG
GTGCTCATTTCGTGGTTCAAATTGACGAAAGCCAATTTCATCACAGGCAA
AGAAGATTGGTATGGTCTTGATCAGCCTCTGGATAACATTATTGCAGGAA
TTAATCATGACTACCCTCAAACTTGAAATATTGAATCCTATTGGAACCGT
TTCAAGCTTAAGATCAAGGCAATGAAGGGAATCAGGCGCGCAGACCTCCA
AAGCTACATGGATGAGTTCATGTGGAGGGAGGAGTTGGCCGTGTTGCACA
AGCTCCAGTATGGGTCTTTGGTTTAGCAGACACGAGGTTTGTTCCTGCTA
AGGGATATATGGCGATCGTACCTAATAGAAACCGCAGGACGTTAACAGCA
ATAATCAATCAAGTTCTAAACGCCAACTCGATAATTCACAGCGATCAGTG
GCGTGCCTATATTAACCTGCCACAATTTGTTCAAAATTGTGTTGGTCACG
AAACGGTCAATCACACGAACCATTTTGTTGATCCACTGACAGGAGCTCAC
ACTCAGAGGAGATGCAACCGTCCTTGTAGAAAAACATTAAGGTTACGAGA
GGGGACAATATTTTCTAACTGGAGGCGAGTCAGCTTATCTAATCTGTTCT
TCATAATGTACTTATGGTCAGAAAAGATCAGTTGCGCACGGACCACTGCA
ATTGTTAATGTGAAGAAAGACCATGTCATTGCCATGTATCAACTGTTACG
GGAGGTGTGTATGTACTACCTCCAGCGCAACCCAATCAGGGTCGGTGGCG
GCGGTGCTCATTTCGTGGTTCAAATTGACGAAAGCCAATTTCATCACAGG
CAAAGAAGATTGGTATGGTCTTGATCAGCCTCTGGATAACATTATTGCAG
GAATTAATCATGACTACCCTCAAACTTGAAATATTGAATCCTATTGGAAC
CGTTTCAAGCTTAAGATCAAGGCAATGAAGGGAATCAGGCGCGCAGACCT
CCAAAGCTACATGGATGAGTTCATGTGGAGGGAGGAGTTGGCCGTGTTGC
ACAAGCTCCAGTATGGGTCTTTGGTTTAGCAGACACGAGGTTTGTTCCTG
CTAAGGGATATATGGCGATCGTACCTAATAGAAACCGCAGGACGTTAACA
GCAATAATCAATCAAGTTCTAAACGCCAACTCGATAATTCACAGCGATCA
GTGGCGTGCCTATATTAACCTGCCACAATTTGTTCAAAATTGTGTTGGTC
ACGAAACGGTCAATCACACGAACCATTTTGTTGATCCACTGACAGGAGCT
CACACTCAGAGGAGATGCAACCGTCCTTGTAGAAAAACATTAAGGTTACG
AGAGGGGACAATATTTTCTAACTGGAGGCGAGTCAGCTTATCTAATCTGT
TCTTCATAATGTACTTATGGTCAGAAAAGATCAGTTGCGCACGGACCACT
GCAATTGTTAATGTGAAGAAAGACCATGTCATTGCCATGTATCAACTGTT
ACGGGAGGTGTGTATGTACTACCTCCAGCGCAACCCAATCAGGGTCGGTG
GCGGCGGTGCTCATTTCGTGGTTCAAATTGACGAAAGCCAATTTCATCAC
AGGCAAAGAAGATTGGTATGGTCTTGATCAGCCTCTGGATAACATTATTG
CAGGAATTAATCATGACTACCCTCAAACTTGAAATATTGAATCCTATTGG
AACCGTTTCAAGCTTAAGATCAAGGCAATGAAGGGAATCAGGCGCGCAGA
CCTCCAAAGCTACATGGATGAGTTCATGTGGAGGGAGGAGTTGGCCGTGT
TGCACAAGCTCCAGTATGGGTCTTTGGTTTAGCAGACACGAGGTTTGTTC
CTGCTAAGGGATATATGGCGATCGTACCTAATAGAAACCGCAGGACGTTA
ACAGCAATAATCAATCAAGTTCTAAACGCCAACTCGATAATTCACAGCGA
TCAGTGGCGTGCCTATATTAACCTGCCACAATTTGTTCAAAATTGTGTTG
GTCACGAAACGGTCAATCACACGAACCATTTTGTTGATCCACTGACAGGA
GCTCACACTCAGAGGAGATGCAACCGTCCTTGTAGAAAAACATTAAGGTT
ACGAGAGGGGACAATATTTTCTAACTGGAGGCGAGTCAGCTTATCTAATC
TGTTCTTCATAATGTACTTATGGTCAGAAAAGATCAGTTGCGCACGGACC
ACTGCAATTGTTAATGTGAAGAAAGACCATGTCATTGCCATGTATCAACT
GTTACGGGAGGTGTGTATGTACTACCTCCAGCGCAACCCAATCAGGGTCG
GTGGCGGCGGTGCTCATTTCGTGGTTCAAATTGACGAAAGCCAATTTCAT
CACAGGCAAAGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:1066213..1068062 - |
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