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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:1056712..1059065- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11873.1.p1 ID=MSTRG.11873.1.p1|Name=MSTRG.11873.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2354bp|location=Sequence derived from alignment at sc0000087_pilon:1056712..1059065- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTTTTGATTCAAAGCGACGTGTGTTGTTGATGTTATGATTTTTATGT
GTTATCAAAGATGGTAGACCTCAGTGATAAACCAATAAGATATTCATTGA
AATACAAGGTTTTTCTTCAATCATCCAAGACCAAACCTCCAATATATCAA
TGCATTGTATTATGTTTTATTCTTGTTTGTTTATTTGCTATTTTTCGGTC
ACGTGACACTTTAGATTCAGATGTTCGATCAATTTTGACATTGGCAAAAA
CAGATTGTTTAAAGAATCGGTTTCAAGAATATTTATTGGTGATACATTTC
GACGAACCTTATTATAAAGATATAACATTTATTCGTAGTTTGTACGAAAA
CATTTTTGGCAAAGTGGTAATTTGCGGACCAGAGCCTGACGCTCATTCTG
GCCGTTTTGTGCCGGATATTGAATTCGAAAGTGAAAGGGGCAAATTTGGT
TATGCATGTCTTGGGAAAGCTATTGAGAAATTTCCCAAATACTCAGGTTA
GATAGAGTCATTCAATAAAAATGTCTTTCCACTGAAATTCTGCTCGAAAT
TCTGTGTTTTTTTCTGCACATTGGCTAATACACGTTTTTTTATAAGAACA
TCCAAAATTTTGGATGAATGTTAATGTTTTGTTTTTACATAACTGTTTCC
ATATCAGACACTTGTTTCATATCAGGACAGTGTCTGCCTATTGTTATATT
GTGTGCTGATATAAGCAAAAAATCTTTTGACCTCTTTTCCAATCTTGCAC
CACATCCGTGTCAATTCAACATCAAAAAGTTTGTAAATTAGAATTGATGA
TGAGTAAGCAAACGATATGACTCTTATTTAAAAACAAAACCTTTATTAAT
GTTATTGGGATATTATATATAATAGACTTGAATTATAAAATCTTTTGATT
TTTCGTCATGCTTTTTCATATCACCCAGCTGGCACACAACGTTGTTTCAA
CGTTTATTTAACGTTCACAACGTCCATATAACGTTAGATGAACGTTAAAA
CAACGTTATGTGCCAGCTGGGCATAAATAAATACTAGATATATGGATTTG
AAAAATGTTGTGGTGCAATCTCATGGCTTCATCAAATTCGATAGTTTAAA
AGACTTCTGGTACACGTTTTTTTTATAAGAATAGTGTACTTTGGATGAGG
GTCAAGTATTCTTAAGAAATTGCCAAAATTGAGGGTGAAGTATTCATATT
AACGTATTCTTACTTTTTTGGACATAAGAAATGATCAATTTGAGAGTTTT
GGACTTTTGAATGAACATTTGGATCTAAAATTACATTTCTGCCTCAAAGT
TTAAATTCAAGTCTATCAAAGAAAGCAGTTTTTTGCTGTTAACCAAATAC
AAATTGACTGTCTTCTTATCAAATTATGTGAAACTCACCCTAGAGAGTAT
TCTTAGGGTATTCTTACAATTTGGCCAATTTTCACCCTGATAGAAGATAT
TCTTGTTAAAAAAAGCGTGTAATAATTTTGGTGTCGAAAACTCTGAAATA
TTGCCTATCGATTCTTAAATTTTCTTCATACCTTATTATCCAGCACTTTG
GCAATATAACCATCAATCTCATAGAACCAGATTTTCTTCAAAGTCATTGG
ATTCCACATTCAGAATGCTTGTTTTTAACATCAGATCTAGAAATCGTTAT
CAAATAATTTCTTACTTTCTTTTCGTTCAGGTTATTTCTACAGTAATTAT
GATTTACTTATCAACTGGTGGAATCTACTCAAATTTGATACCAGCAAAAT
ATGGATGTTAAAACCAGATACCGATTTGCAAAAAAGCAGAACCGCGCACC
GCTCACATCAAACTAGCTGTCAAAATTACATAACATTCTTACAACGATTT
TCAAACTCACCACAGTTCAAACAACTTTGGTCAAAATTCCAACAATCAAA
ATCAAATGATGGTACATCAGTTTGTCTGATTCGCCCATCTCGCTTTTTTT
ATATCCCGAAACGGTTTACCGGGCATTTCCCGCTGTTATCGTACGGCGCG
CACTTAAACCAACTTGAGCAGCATACAGCTCCGATAAATATCGTTCAATC
ATTCGTTTCAATTGACCAAATCGAAGAATTACCTGAATATTATCGACCAC
CTCAATATCGATTTGAATCGAGCCCATTGTTTTGGTCTGAATACGATATT
TCATTAACAATAGCTCATTCTTTTCGTTTATATCGTAAAAACGATCTTGC
TTGGAGAAAAAATCTGAAACAGCTTGTTGAAAAATACTTTGAAATTAGTA
GGCGTTTAACGAATTGTTAATATATACTTGGTATCTTGTCAAATAAAAAC
CAATTTTCTTCGTGTATGTGAGACTGTAGAAATAACAACTTCGTCAGTAA
AAAT Coding sequence (CDS) from alignment at sc0000087_pilon:1056712..1059065- >MSTRG.11873.1.p1 ID=MSTRG.11873.1.p1|Name=MSTRG.11873.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2052bp|location=Sequence derived from alignment at sc0000087_pilon:1056712..1059065- (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTTCTACAGTAATTATGATTTACTTATCAACTGGTGGAATCTACTC
AAATTTGATACCAGCAAAATATGGATGTTAAAACCAGATACCGATTTGCA
AAAAAGCAGAACCGCGCACCGCTCACATCAAACTAGCTGTCAAAATTACA
TAACATTCTTACAACGATTTTCAAACTCACCACAGTTCAAACAACTTTGG
TCAAAATTCCAACAATCAAAATCAAATGATGGTACATCAGTTTGTCTGAT
TCGCCCATCTCGCTTTTTTTATATCCCGAAACGGTTTACCGGGCATTTCC
CGCTGTTATCGTACGGCGCGCACTTAAACCAACTTGAGCAGCATACAGCT
CCGATAAATATCGTTCAATCATTCGTTTCAATTGACCAAATCGAAGAATT
ACCTGAATATTATCGACCACCTCAATATCGATTTGAATCGAGCCCATTGT
TTTGGTCTGAATACGATATTTCATTAACAATAGCTCATTCTTTTCGTTTA
TATCGTAAAAACGATCTTGCTTGGAGAAAAAATCTGAAACAGCTTGTTGA
AAAATACTTTGAAATTAGTAGGCGTTTAACGAATTGTTAAATGGTAGACC
TCAGTGATAAACCAATAAGATATTCATTGAAATACAAGGTTTTTCTTCAA
TCATCCAAGACCAAACCTCCAATATATCAATGCATTGTATTATGTTTTAT
TCTTGTTTGTTTATTTGCTATTTTTCGGTCACGTGACACTTTAGATTCAG
ATGTTCGATCAATTTTGACATTGGCAAAAACAGATTGTTTAAAGAATCGG
TTTCAAGAATATTTATTGGTGATACATTTCGACGAACCTTATTATAAAGA
TATAACATTTATTCGTAGTTTGTACGAAAACATTTTTGGCAAAGTGGTAA
TTTGCGGACCAGAGCCTGACGCTCATTCTGGCCGTTTTGTGCCGGATATT
GAATTCGAAAGTGAAAGGGGCAAATTTGGTTATGCATGTCTTGGGAAAGC
TATTGAGAAATTTCCCAAATACTCAGGTTATTTCTACAGTAATTATGATT
TACTTATCAACTGGTGGAATCTACTCAAATTTGATACCAGCAAAATATGG
ATGTTAAAACCAGATACCGATTTGCAAAAAAGCAGAACCGCGCACCGCTC
ACATCAAACTAGCTGTCAAAATTACATAACATTCTTACAACGATTTTCAA
ACTCACCACAGTTCAAACAACTTTGGTCAAAATTCCAACAATCAAAATCA
AATGATGGTACATCAGTTTGTCTGATTCGCCCATCTCGCTTTTTTTATAT
CCCGAAACGGTTTACCGGGCATTTCCCGCTGTTATCGTACGGCGCGCACT
TAAACCAACTTGAGCAGCATACAGCTCCGATAAATATCGTTCAATCATTC
GTTTCAATTGACCAAATCGAAGAATTACCTGAATATTATCGACCACCTCA
ATATCGATTTGAATCGAGCCCATTGTTTTGGTCTGAATACGATATTTCAT
TAACAATAGCTCATTCTTTTCGTTTATATCGTAAAAACGATCTTGCTTGG
AGAAAAAATCTGAAACAGCTTGTTGAAAAATACTTTGAAATTAGTAGGCG
TTTAACGAATTGTTAAATGGTAGACCTCAGTGATAAACCAATAAGATATT
CATTGAAATACAAGGTTTTTCTTCAATCATCCAAGACCAAACCTCCAATA
TATCAATGCATTGTATTATGTTTTATTCTTGTTTGTTTATTTGCTATTTT
TCGGTCACGTGACACTTTAGATTCAGATGTTCGATCAATTTTGACATTGG
CAAAAACAGATTGTTTAAAGAATCGGTTTCAAGAATATTTATTGGTGATA
CATTTCGACGAACCTTATTATAAAGATATAACATTTATTCGTAGTTTGTA
CGAAAACATTTTTGGCAAAGTGGTAATTTGCGGACCAGAGCCTGACGCTC
ATTCTGGCCGTTTTGTGCCGGATATTGAATTCGAAAGTGAAAGGGGCAAA
TTTGGTTATGCATGTCTTGGGAAAGCTATTGAGAAATTTCCCAAATACTC
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:1056712..1059065 - |
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