|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:909346..916419+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11859.4.p1 ID=MSTRG.11859.4.p1|Name=MSTRG.11859.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7074bp|location=Sequence derived from alignment at sc0000087_pilon:909346..916419+ (Clytia hemisphaerica_ch_hm2_pilon) TATAAATCGACTGAAATTGTTACCGTGATCAAATCTTTTGGAAGGGATAA
TCAGAATTCCAAACCTTTCCTACAATTATACGACGATTGGTATTTATTTT
ACTAGAAGAAATTACAAAACGTATATCGGGATGAGTTTTCGACATGGTAT
GAGTGTCGATGACATCACATTGTCGCATATCGAAAAAGCGCACCAAAACA
TGAAAGACCTATCGAGCACACTCTTTATAGAGACACCATTGGTCCATGGA
ATGGAGAATCGTTTACGTGGAGAAATTCCCAACGTTGATTCGTTGTCGCT
GAAATTGGAATGTTTGCAAAGCACAGGTTGGTATGGGAGAGCTCTCGaag
tgttttgaaagttttccatTCGTCAGGTGGCTCGTCTAGCTCAAGATTTT
AATAAGAATTACATAATAGAagtactaccttatcggggaaaaaatgtcgg
gggaaagtgacgaaaatgcctgaAATGACGAAATTTATCCCCGACGAGAA
AAAACaaccgactaaataaaactccgacatttttttccccgataaggtat
gtctaaaaaaaaTATAGGGGAAATCTGAAAAACGCcgttttaagattttt
cctgGTGGTATTGTTGCGAGCTTCCGATGTACGATGCTAGTTATGTCtca
ttcttttctttctcttctCTATTTTCAAGAAAGGCTCTTTCAAAATCCGT
GGTGTGGTCAATCAATTTCTCAACCTACGTGACAAAGATCGACAAAAGAA
GAGAACCTTGGTCACCATGTCTGCTGGCAATTATGGGAAAGCTTTTGCGT
TCGTTTCGAATCAAGAACACATGCCAGGTGTTGTGTACATGCCCAACGAA
GCACCAAAGGATCGTCAAACAACAATTGAGGTTTGTCCACAGGGTCAAAA
TACTTGAAAGTAAAAACGTTGGGCTTTGCAATGCTCCCCGCGTGTGATTG
AGGAGGTCTCTGAAATTTCGACTAATATCCAAAGGGATGCTTCaacaatt
gaagaaaaaaatttttaaacaaaaactaaactaaaatttctacataaaaa
GTAACCGCCTATTGCTGTAAAATAGCAAATTCTGTATTATAGTCACCAAG
TAACTCAATTTTTGCTTTTCGATTAATGAAAATGACTTTCGCTTTCAGTC
TTACGGTTGTACAGTGAATCGTTCACCAGTCCAACAACTCGtggaaaatg
taaacaatgaaattgaACGAACCGATGGAATGTATTTTCATTCTTATGAT
GACCCTTTCCTTATACTTGGAAACGCCAGGTTggtcttctttcttttctt
ttgttctctTGTCCGAAGGTTATTGCTCACTTAACTACGTCTTTGTCATT
TGCATTTCATTATCAAAATCAGCTacaattttaaatctttaactCCTGCG
CTTTTTACGTTACTTTACTGGGAtcaattttcgcggggattaaatttgcg
GTTGGGCTCATCCAagaaatttcgcggggacttaaaaTTGCGGATATGGC
ATTAAAATcagagacaatattttcatgattGTGTCTTTACTGCCAAACTA
TACATACTGGTTGTCGAAATACGCATTaatagcgcttctttgatgtcagt
tgaaatttttaaagtaactgtctgaaatattttgagttttgttcaaAAAA
GTTTCGCGGATAAGACCTTattaaatttccattgggactcaTTTTCGATG
ATGACACCCAGATCCATGAAATCtataatccccgccaaaatttatcctaT
TAAAGTAGCCTCTGACGTTCCTTTTGTGTTTGACGTGGGCTGGCTTAAAA
GACAAAAATGTGTTTCAATAAAATCTTCAACAGCTTACTTAGCAACCAAA
TCGAGCCTAGGATGTCACAAGTGTTGCCGTTGTGTAAGAACCATATTAGC
GATTgcctaaaatcaaaataaggACCTCATTAAACAAGGGTCAGGAACAA
AAGGAGCTGAAGACGTTTCAAAAATGAGATGGAGAAATCagtcaaattaa
attgaaagTTCCAGATTATTGTAGTCGATGTTTGGAAAACTCGCTTTCAC
TCTAAAACCCTGTGATGATACCATACATATGGAgacatttatatttttta
ctctctctctctctctctctctatttTCTCTTACAGTGCAGGTATGGAAT
TGATGGCACAGACTTCGCGACAACAGCAACCAGATATCGTATTGGTGTGC
TGTGGAGGTGGTGGTCTTTGTGCTGGTGTGGCTGCCGCTCTCAAACTATC
TGATGGTTGGCAAAATACAAGAATTTATGGTGTCGAAGCAGAGAATGGTG
GGTCATGCAAGCTTGCGAAATATAGAATTGTGGattctttttatgatttt
taggaGTTGTTCTAACAGAAGGTACCTCACACTCTTGCCGTAACGAGGAA
CCACCTTCTAAGATTTGAGAACTTTTCTGTATTCTTCATAGTAGAGTATC
GaccgtgttttttttatttccagtGCCGAAAATGTACGAAGCGTTGAAAG
CTGATGGCCCAGTGTTATTCAATCGAAAGCCAACCATCGCGACGGGTCTC
GCCCCTCCTACCGCTGGTATGTAATATGGTATTCTAATCTCTGTCGAAAT
CAATGTGTATTTTCAATACGACAATGACTAGTTTTTGAGTGCTGCACTAG
GGAAATAATACCAAGACaaaaaaaaGCACGATTCCGTGTAAATTGTGTAA
AATCGTGTaaaaaaaCACGAAATTCTCAGTCGGTTGGTTAAATTTCCCAT
TCAGTTGGTTAAATTTCCCATTCTGTGAACATGTCAACACTGAAAACCGA
CAGTCAGTTCTTGTTATTTCATTCTCAGGTGAGATGACTTACAAGATGAT
CAAGAAATACACTGAAGGGATTCTCCTTGTCTCTGAAGATGAACTCAAAA
GGTATCCCTCATAATTCATATTGTAGGTTTTTCTCaattgaaagtgaaag
ttaATATGTAGTATGTTCAGACTGTATTtgattaggcgagaccaatttga
ttagttgttttacgggcccgaccgaccctgaaattccaaaagtcgaaata
aaaataaaatttatttggtagtagcagtgggctatagagacctttttttt
caaaattaagtttgcataattttttttggttggttgggacccaaataaca
taaatctaagatatttttggatatttccaaaaaatggcgGTTCTCCGCCC
TTTTTTATGcccaaaatgggccattttcgggccattttgcttggaaaaaa
aatctaaaacctgctgtgttggtgctacaaccatcaaattaggctcaaaa
tgatccttggaaaaaagaaggattagaatgtaacaattatatacctctgc
catatatataaacttaaaaaattaggtttttcggccaaaattgaccaaaa
ttgcgaaaaaacagggttttgcctggaaaaaattctaaaatctgttctgt
ttgtgctacaagcctcaaattagggtcaaaatattccttggaaaaaagta
ggattaggatgtaacaattatatacttCTACCATAtatgaaaacttcaaa
aaatttggatattgggccaaaattgaccgaaactggggaaaaaagggttt
gcctgggaaaaaaatctaaaatctgttctgttggtgctatgaacctcaaa
ttatgcttaaaatattccttggaggaaagtaggattagaatgtaacaaat
aCATACCTCTACcatatatataaatttaaaaaattaagtatttaGGCCGA
GATAGACCAAAACCGGGAAGAAACTAGGATTTGCCtggaaataaaaccta
aaatctgttctatttgtgctacaaacctcaaattaggcttaaaatgttcc
ttgggaAAAAGTAGGAATCGAATGTAGCAATTACATACCTCTACTAcata
tataaaattcaaaaattagctATTTAGGCCAAAATGGACCGACACCAGGA
AAATGctgggttttgcctggaaataaaacctaaaatctgcGCTGTTCGTG
CTACAAACCTCAAactaggcttaaaatgttccttggaaaaaagcagGATA
AGAATGTAGCAATTATGTACCTCTTAACatgtatataaaattaaaaaaat
taggttttcagGTCAAAATGGACGGAAACCGGGAAGACACTGGGTTTTAC
CGGTTTCCGTCCATTTTGGCCTGAAAaccttatttttttaattttatata
catGTTAAGAGGTACATAATTGCTACATTCTTATCCTGCTTTTTTCgaag
gaacattttaagcctagtTTGAGGTTTGTAGCACGAACAGCgcagatttt
aggttttatttccaggcaaaacccagTTTCTTCCCGGTTTCGGTCTATCT
CGGCCtaaatacttaattttttaaatttatatatatggtagaggtatata
attgttacattctaatcctactttcctccaaggaatattttaagcataat
ttgaggttcatagcaccaacagaacagattttagatttttttcccaggca
aaccctttttttccccagtttcggtcaattttggcccaatttccaaattt
tttgaagtttatatatatggtagaagtatataattgttacatcctaatcc
tacttttttccaaggaatattttgaccctaatttgaggcttgtagcacaa
acagaacagattttagaattttttccaggcaaaatcctgttttttcgcaa
ttttggtcaattttggccgaaaaacctaattttttaagtttatatatatg
gcagaggtatataattgttacattctaatccttcttttttccaaggatca
ttttgagcctaatttgatggttgtagcaccaacacagcaggttttagatt
ttttttccaagcaaaatggcccgaaaatggcccattttgggCATAAAAAA
GGGCGGAGAAccgccattttttgaaaatatccaaaaatatcttagatcta
tgttatttgggtcccaaccaaccaaaaaaaattatgcaaacttaattttg
aaaaaaaaggtctctatagcccactgctattggtagtacatttttatttt
cattgctttacttACAGActccaaaatttgcaaaattttgttagtttttc
aaaagttttgagaaatttatgttcagtttttcatttcatccatgaaatcg
acctttacgtgcctttttattttcttttgcacatttttgtcaagatgtag
tagtttttgctgcctttttaggagattttaaaggtgaaattctattttta
tttttattttttcccgaCCGACcaaccctcttttttgggtagtgtggccc
gtaaaacaacaaattaaattggcctcgcctgaGAGAGTTTATTAATAACA
AAAACTATACTATAAGTCGTCGAAACAAAGTAAAaagaagtgaaagaaaa
caTCATCTTTTGGTTTTCTGGTCCATTGTGTAagcatggaattattatag
acactggaaaaacaatgagctgaattttgccaatttcttgtgtactagct
atgtccgcagtaatgatattattgttcactctccttccctcattaaatga
tttttcgaagcatttttattacatttcttatcgaaaatcactcatccaat
tcccaaaagagacttaaaactgtCCTGtcagagtcagattcttccactta
attgataattataagtcgttatgacgtttcaagctgtgagaaagatgcaa
aagacgtgttgtgtataagaaatttaatgttgacaccggaaattttcaaa
cttcaacctcaaaaaaaccaccttgcctccacgtgcctccaaaggatttt
cataccacagtggagccaagagaCTCAAGTCTtatttatgttaatttcag
ctcttctggggacagtcttggaaagatatttccaattgaaaattttgtta
aattataagcattttgtctgaatttcttgtctaatgatgattttctcaca
ttagatttcacaaatgtatccagcttggtatgctagcctactttcaaact
tttttttctgcaaatgtacaaaaagaaagagctagagaactttttaaaca
taagactgataaacgtttttttaaataagacatcttcgagccgccatgac
agttgtcctttgcggacaaagctagaacatcaattgttttctgaaacaat
agaaagacaatactttgctctccaccgtttcattcgatgtttatccagag
tctctgtAATAAATCCATGGTGTAAGGGAGTTTTTATTGCGATTTAATTT
ATATCCATCCTCGTGCAAATGGTTAAGTTCGATCGATCTATAAGATAGAT
AAACCAATAATCCATGCATGTACGACCAATtccatttccaaaaaatgatt
CACAAGGAACAATTCAAGAGAAGAagagcattttttacaaaataattcac
ATAGACAAGACCAGAAAGACTTGCTATTCAGGTGAATGCACTACTTCGTA
AAACATTAACTATCTTTAGATAAAATACCTAGATTTTCTTACTTTATTGT
TACACGCTCGTCGTCCTTTTTGTTTTGTCATTGTTACAAAACAGCATCAA
GACATAAGTTGAATCGTTGCTTCCATCTCTCATTTTCACAGGGCAATGAA
GACATTGTTTAGTCTTGGTTTGGTGGTTGAGCCGTCAGGTGCGGCTGCGT
TCGCTGCACTGCAATCGAATAAAGTACCGGAAGCCGAAGGGAAAAAAGTG
ACGGTAATTGTGACCGGTGGAAATGTCACTCTTAAAGATCTGACTCAACA
CATTGGACTCTGAAAACATGAATCTTTTTAGTATGAATAGTTTTCAGGCC
atcagaaaatatattcaataaaatttgtaaTCCAGCTCCTTTTTTAATAC
TAGAGATCCATATATTATAGAAATACACCATTCACAGACAGATTTGATGT
TAGTTCGTTTAAAGTTTCTCAGGCGATATCATTCGACTAATCAGATAGTT
TAACGTTTCCCTGTCTACAATCTGCTGCCCCCTCGTTAAGAAGATAAAAC
AACTTGATCTCATTACTCAGAAGGCTCCAAATATGTCATTAAAGGTTAAT
TAGATGGTGATTTCTTTCGCAACT Coding sequence (CDS) from alignment at sc0000087_pilon:909346..916419+ >MSTRG.11859.4.p1 ID=MSTRG.11859.4.p1|Name=MSTRG.11859.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4464bp|location=Sequence derived from alignment at sc0000087_pilon:909346..916419+ (Clytia hemisphaerica_ch_hm2_pilon) ATGTCTGCTGGCAATTATGGGAAAGCTTTTGCGTTCGTTTCGAATCAAGA ACACATGCCAGGTGTTGTGTACATGCCCAACGAAGCACCAAAGGATCGTC AAACAACAATTGAGTCTTACGGTTGTACAGTGAATCGTTCACCAGTCCAA CAACTCGtggaaaatgtaaacaatgaaattgaACGAACCGATGGAATGTA TTTTCATTCTTATGATGACCCTTTCCTTATACTTGGAAACGCCAGTGCAG GTATGGAATTGATGGCACAGACTTCGCGACAACAGCAACCAGATATCGTA TTGGTGTGCTGTGGAGGTGGTGGTCTTTGTGCTGGTGTGGCTGCCGCTCT CAAACTATCTGATGGTTGGCAAAATACAAGAATTTATGGTGTCGAAGCAG AGAATGtGCCGAAAATGTACGAAGCGTTGAAAGCTGATGGCCCAGTGTTA TTCAATCGAAAGCCAACCATCGCGACGGGTCTCGCCCCTCCTACCGCTGG TGAGATGACTTACAAGATGATCAAGAAATACACTGAAGGGATTCTCCTTG TCTCTGAAGATGAACTCAAAAGGGCAATGAAGACATTGTTTAGTCTTGGT TTGGTGGTTGAGCCGTCAGGTGCGGCTGCGTTCGCTGCACTGCAATCGAA TAAAGTACCGGAAGCCGAAGGGAAAAAAGTGACGGTAATTGTGACCGGTG GAAATGTCACTCTTAAAGATCTGACTCAACACATTGGACTCTGAATGTCT GCTGGCAATTATGGGAAAGCTTTTGCGTTCGTTTCGAATCAAGAACACAT GCCAGGTGTTGTGTACATGCCCAACGAAGCACCAAAGGATCGTCAAACAA CAATTGAGTCTTACGGTTGTACAGTGAATCGTTCACCAGTCCAACAACTC GtggaaaatgtaaacaatgaaattgaACGAACCGATGGAATGTATTTTCA TTCTTATGATGACCCTTTCCTTATACTTGGAAACGCCAGTGCAGGTATGG AATTGATGGCACAGACTTCGCGACAACAGCAACCAGATATCGTATTGGTG TGCTGTGGAGGTGGTGGTCTTTGTGCTGGTGTGGCTGCCGCTCTCAAACT ATCTGATGGTTGGCAAAATACAAGAATTTATGGTGTCGAAGCAGAGAATG tGCCGAAAATGTACGAAGCGTTGAAAGCTGATGGCCCAGTGTTATTCAAT CGAAAGCCAACCATCGCGACGGGTCTCGCCCCTCCTACCGCTGGTGAGAT GACTTACAAGATGATCAAGAAATACACTGAAGGGATTCTCCTTGTCTCTG AAGATGAACTCAAAAGGGCAATGAAGACATTGTTTAGTCTTGGTTTGGTG GTTGAGCCGTCAGGTGCGGCTGCGTTCGCTGCACTGCAATCGAATAAAGT ACCGGAAGCCGAAGGGAAAAAAGTGACGGTAATTGTGACCGGTGGAAATG TCACTCTTAAAGATCTGACTCAACACATTGGACTCTGAATGTCTGCTGGC AATTATGGGAAAGCTTTTGCGTTCGTTTCGAATCAAGAACACATGCCAGG TGTTGTGTACATGCCCAACGAAGCACCAAAGGATCGTCAAACAACAATTG AGTCTTACGGTTGTACAGTGAATCGTTCACCAGTCCAACAACTCGtggaa aatgtaaacaatgaaattgaACGAACCGATGGAATGTATTTTCATTCTTA TGATGACCCTTTCCTTATACTTGGAAACGCCAGTGCAGGTATGGAATTGA TGGCACAGACTTCGCGACAACAGCAACCAGATATCGTATTGGTGTGCTGT GGAGGTGGTGGTCTTTGTGCTGGTGTGGCTGCCGCTCTCAAACTATCTGA TGGTTGGCAAAATACAAGAATTTATGGTGTCGAAGCAGAGAATGtGCCGA AAATGTACGAAGCGTTGAAAGCTGATGGCCCAGTGTTATTCAATCGAAAG CCAACCATCGCGACGGGTCTCGCCCCTCCTACCGCTGGTGAGATGACTTA CAAGATGATCAAGAAATACACTGAAGGGATTCTCCTTGTCTCTGAAGATG AACTCAAAAGGGCAATGAAGACATTGTTTAGTCTTGGTTTGGTGGTTGAG CCGTCAGGTGCGGCTGCGTTCGCTGCACTGCAATCGAATAAAGTACCGGA AGCCGAAGGGAAAAAAGTGACGGTAATTGTGACCGGTGGAAATGTCACTC TTAAAGATCTGACTCAACACATTGGACTCTGAATGTCTGCTGGCAATTAT GGGAAAGCTTTTGCGTTCGTTTCGAATCAAGAACACATGCCAGGTGTTGT GTACATGCCCAACGAAGCACCAAAGGATCGTCAAACAACAATTGAGTCTT ACGGTTGTACAGTGAATCGTTCACCAGTCCAACAACTCGtggaaaatgta aacaatgaaattgaACGAACCGATGGAATGTATTTTCATTCTTATGATGA CCCTTTCCTTATACTTGGAAACGCCAGTGCAGGTATGGAATTGATGGCAC AGACTTCGCGACAACAGCAACCAGATATCGTATTGGTGTGCTGTGGAGGT GGTGGTCTTTGTGCTGGTGTGGCTGCCGCTCTCAAACTATCTGATGGTTG GCAAAATACAAGAATTTATGGTGTCGAAGCAGAGAATGtGCCGAAAATGT ACGAAGCGTTGAAAGCTGATGGCCCAGTGTTATTCAATCGAAAGCCAACC ATCGCGACGGGTCTCGCCCCTCCTACCGCTGGTGAGATGACTTACAAGAT GATCAAGAAATACACTGAAGGGATTCTCCTTGTCTCTGAAGATGAACTCA AAAGGGCAATGAAGACATTGTTTAGTCTTGGTTTGGTGGTTGAGCCGTCA GGTGCGGCTGCGTTCGCTGCACTGCAATCGAATAAAGTACCGGAAGCCGA AGGGAAAAAAGTGACGGTAATTGTGACCGGTGGAAATGTCACTCTTAAAG ATCTGACTCAACACATTGGACTCTGAATGTCTGCTGGCAATTATGGGAAA GCTTTTGCGTTCGTTTCGAATCAAGAACACATGCCAGGTGTTGTGTACAT GCCCAACGAAGCACCAAAGGATCGTCAAACAACAATTGAGTCTTACGGTT GTACAGTGAATCGTTCACCAGTCCAACAACTCGtggaaaatgtaaacaat gaaattgaACGAACCGATGGAATGTATTTTCATTCTTATGATGACCCTTT CCTTATACTTGGAAACGCCAGTGCAGGTATGGAATTGATGGCACAGACTT CGCGACAACAGCAACCAGATATCGTATTGGTGTGCTGTGGAGGTGGTGGT CTTTGTGCTGGTGTGGCTGCCGCTCTCAAACTATCTGATGGTTGGCAAAA TACAAGAATTTATGGTGTCGAAGCAGAGAATGtGCCGAAAATGTACGAAG CGTTGAAAGCTGATGGCCCAGTGTTATTCAATCGAAAGCCAACCATCGCG ACGGGTCTCGCCCCTCCTACCGCTGGTGAGATGACTTACAAGATGATCAA GAAATACACTGAAGGGATTCTCCTTGTCTCTGAAGATGAACTCAAAAGGG CAATGAAGACATTGTTTAGTCTTGGTTTGGTGGTTGAGCCGTCAGGTGCG GCTGCGTTCGCTGCACTGCAATCGAATAAAGTACCGGAAGCCGAAGGGAA AAAAGTGACGGTAATTGTGACCGGTGGAAATGTCACTCTTAAAGATCTGA CTCAACACATTGGACTCTGAATGTCTGCTGGCAATTATGGGAAAGCTTTT GCGTTCGTTTCGAATCAAGAACACATGCCAGGTGTTGTGTACATGCCCAA CGAAGCACCAAAGGATCGTCAAACAACAATTGAGTCTTACGGTTGTACAG TGAATCGTTCACCAGTCCAACAACTCGtggaaaatgtaaacaatgaaatt gaACGAACCGATGGAATGTATTTTCATTCTTATGATGACCCTTTCCTTAT ACTTGGAAACGCCAGTGCAGGTATGGAATTGATGGCACAGACTTCGCGAC AACAGCAACCAGATATCGTATTGGTGTGCTGTGGAGGTGGTGGTCTTTGT GCTGGTGTGGCTGCCGCTCTCAAACTATCTGATGGTTGGCAAAATACAAG AATTTATGGTGTCGAAGCAGAGAATGtGCCGAAAATGTACGAAGCGTTGA AAGCTGATGGCCCAGTGTTATTCAATCGAAAGCCAACCATCGCGACGGGT CTCGCCCCTCCTACCGCTGGTGAGATGACTTACAAGATGATCAAGAAATA CACTGAAGGGATTCTCCTTGTCTCTGAAGATGAACTCAAAAGGGCAATGA AGACATTGTTTAGTCTTGGTTTGGTGGTTGAGCCGTCAGGTGCGGCTGCG TTCGCTGCACTGCAATCGAATAAAGTACCGGAAGCCGAAGGGAAAAAAGT GACGGTAATTGTGACCGGTGGAAATGTCACTCTTAAAGATCTGACTCAAC ACATTGGACTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000087_pilon | genome | sc0000087_pilon:909346..916419 + |
|