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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:350533..355390- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11828.2.p1 ID=MSTRG.11828.2.p1|Name=MSTRG.11828.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4858bp|location=Sequence derived from alignment at sc0000087_pilon:350533..355390- (Clytia hemisphaerica_ch_hm2_pilon)
CTACTATTTCCATTTCTTTAATGTTTCAGATCAAATTTCTAAACAACAAT
AATGAGGGATATAAAAGAATGGTCATTGCATAATGGGTGTACCTGTTAGT
ACACTTGTTTACACCTCCCATAATAACAATAACAGCCGGCGTGAACACGT
CAGCAATAGTTGTGTAAGTGAAACACACAGTAGATTGATACAAGTCATGC
CAGCTGATGATATTAGACGGGTAAGTGATCCGCTATTATTATCAAAAATA
TTTATGACCTTATTTTTATAAGGGATCTTTCTTAAAAAAATACAGGTGGA
ATAGTGCTTATTGTCAAAAAAGTCTTTCCTTTTACTGAGCTGTTGTACCT
CTTTTTATAATTGTCCACTTTGGTCAAAGATTTCATTTCAGTTATTTTGG
AAAGTCATAGAGAAGTTTTAAAGAAATTTTTTAAAAGCTAATTTGTTTTG
ATATTTTTGACTATCTTCATTTTTTCAGAAAGATGGGGAACTTTTAAAGT
ACAAGAACGTTTTTAGTGGATGGGGCAAAAGATATTTTCGATTGGAAAGA
TCTTATTTACATTATTATGAAACAAAACACGTAAGTCGAATCTTTTGTTT
GTTTTTAAAAGTCTCATTCTACTTGTTTATTGGATTAGCGTTTGAATGTT
TAACTTTAAAACTTTAAAACCATGCATCTTTTTTGTGGTTAGCTGACCTT
TTGGACCTTTTCCTAGCACTCTTTTTTAGATTTCTTTCTAAAAGCTTTTG
TAAATTGTTAGATAGTCTTAACCCTCGGGGGGGGGGCACTCGATTTCGAA
ACGACGGCATGTGCCGCCTCAAAAATGGCTTTTTAATCTGACCCATTTCA
GTGCAGCCCTTGAGCAGTGAAAAGGTACCCTTACAGTGCATTTACCAATT
CAGCAGTTCTTAAAAAACACACCCTTACGGCGTATCCAGCTAAAAGAAGA
CCCTTGTATTGTCCTCTATCAAAAGTAGGATGTACTGTACATTTTTAGCG
GGGTCTAGAAAAACCTACCTTTAAGGGCGGCACATGCCGTGGTTCGGACC
ATATGGATGCCCGCCCTCCGGGGCCTTAACACATCAGTAGTTATAAAATA
AATGATTGTTAAAAGTCAATTTGTAACAAAGATCTTTTAGAAGCAAATTT
ATTTCAAAATTTTGAAGTAGCACATTTCTTCAGGTTTCATGCCTTACGGC
AATCATCAGACGTACAAACCAAACATGCATGTATCAAACATAACCAGTCT
TGATTTTTAGAGTCACCAACCAGTAGCCACCATTACACGTGGAGAAATCA
CACAGGTCAAACAAAGTACTGCATACCCTGGACGAAACAATGTTTTCGAA
ATAGTACAGAAAAGTGGAGTCATCTGGTATTGCCAAGCTAGTTCACCGGT
ATGTTTATCCGGTATCCTCGAAGGGAGAAAACATTCACGTAGTAGCTAAT
TTTAATCCTACAGTAAACTCTCTAATTCGAACATCTACTATTCGAATCTT
TCTATAATACGAACTGAAATGTTGGCCCTCAGCCAGGAGTTAGTATAAAA
TACTTTCTCTAATTCGAAGAAAATTCTTGGTCCTTTGAAGAGATCGAATT
AGAGAGAGTCGATTGTATTTCCCTGGACTTCCACTCCTTTTTTTAATTCT
AAACTGAAGGACATTGTGTTTGTTACGCTATGACTTTCTGAGCAAATTTA
ATTTTTGCGTTTTAAATTTCCAAATAATTATCCCGTTGTATTCATAGGGA
GAAATGGTATCATGGATGCAAGCCTTGTCTACTGTTCCTCTTATGGTCAA
CCCCGCGCAGGTAATCATCATTCACGCCAAAATTAGGTTCCTTACTCTTT
CGAAGTAAGCTTACAAGAAAGCGCATTTCCGTTCGTAAAAACGACTTTAC
AAGGAATTGCTTAAAGGTTTTGTTTTAAACAAAGTGATATCGTTTGCTTA
CCCGTCAATTTTAAATCTCAAGTTTTTTCACATTGAATGGACACGAATGT
GGGGTAAGATTGGTCAGAAAGAGAAAGAGAAAACAATTTTTTTTTATTCA
GCACAAACTCGAACACTTAACAATAGGAGACACTGGCCTGATTTAAAGCC
AGTGTCTGATAGAAACTGGAACACTTATGTAAAACTAAAACCTTCAAAGC
CAGACAAAGCAGCCCAATTAATATAGGAAAGGGAAGATTTACCAGGGTCA
AAAATAGGCTTTTAACATTTACTCTCTACTTTTTGTCTTAGTATCCAATG
ATTCCGGCAGATCAAGCGCCTCAAATGCCACCTGCCCCTTTCCCTCCCAC
ACATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATACGATTCACCGT
ACAGGGAGTTGATGAACGATGCACACCACACTGCTTATCATTCCAACACA
CCACACGGTAAAAGATTTTTCGCTTTCTTCCAAGGGATAAATCTGATGTT
TAAAGAAATTTGGTAGTAAAATGTAAATTGTGCGAACCACTACACTAGGT
GGGGTTGTCATGTTTGGTGTTATCGGTTGGTTTTTATAAATTTAAGGACA
AAATGGAGCGAACGAAACTTGATAATATCTTAAACTTTTCATTGTTTGAG
TTGTTTTTTTTGTATGGCAATTTAACATCAACTCTTGAGCAAAATAACCT
GATGGCGGAGTGTTTTCCTTCTTTATTTCTGATATTTTTTTCTATTTTCT
CCTCCCGACTAGAACGTAGTTTAGGTCACGTAGGCCACGTGTCACGGAGA
AAACATTTATCTGATATTCCGATGGTGGATTGGCGGCCGCCCATGCTAAA
GCTCTGAAGGAGCGGTCAATTTCCCATCGGAGAGGAATGATAGTTGGCCT
TTGATGTGCGCACATAAACATAAACATTCCCGAAAACGAGGGCCTCCCGC
TGCAAAATCCTTGACGCGGTTTTGCGAAATTTCGTAATCTAAATCTTCCA
GAATGAGATGTTGAAAAATTTCCCGACAAGCTTTAGCGTGTCGGATGAAA
ATAAGGGAGTGTAAGAGACCTAAATTAAGGGCTCTGACCATAGTGAATTT
TTCATAATTGCCGTGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAA
AACTATGGCATGTTATACATTTTCTGTTAGACAAACTATTCCTGAATCTG
AAAATTCAAAAATTGCATTGAAAAAATTTGATGAAGAAGAAAATGAAGAC
TTTTGTGAGGAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGA
AAAAACATTTTGAAAAATTTTTCGCAGTAGATGGTGTATCTTTTACCGAA
CAATAAAAATTTTTGCGGAAAATCTTTGTAAATGCTTCTTTGTCTCGAAA
TCTTCAAAATAGTGGTTTTTCATCAATTTTTTACCTGGATTTTGCTTAAA
AAAACAGTCATAACTTTTGACACATCTTTTTAGAAAAATTTTCCGCAAAA
TTTAAAATAGTTCAATTCTTTGAGGACAGTGTAAAGAAATTTTGAAACAA
AAAAGTTAATTACCCATTAAAACTAAGCATTTTTTGTAAAAGAGGGTGAT
GCAACATATTATTAACATCTTTTTAAAGTTCATAACGTCATTTTTGCAAT
TAAATTCTTAATTACTCTTAAGAGATTCGATTAAAAAGCAATTTATAAAG
GCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAATATAACTTTTATGTT
CAAATACCAAAATCAATTTTTGGACTATGGTCAGAGCCCTTAAGGAGAAG
TGGTCACATCCCAGTGGGAACCATGAGTTTTTAAAAGCTAAAATACGAGT
TATCACTAAGGGAATATTTTGGTTGAAAAAATCTAAGACGACTTTTTAAT
TCGAAATCTTTGGATTACACACTTATACATTATTTCAATTCTTATTCAGA
TTGTATACACGATAGTCCACCGCCACCCTACACTGCCACCCCAATTACAC
CTCAACCACCCCACAATCCTAATTATTAGGAGTATGCAGAATGATTTCTA
GTTCAGATGGATACAAATGTGTTTGATACAAATGAATGGAACGAGATGTT
GGTGTCGATATGCAAATACCAAGTTCCAGCAAGCCTTCTAAGGCTTATTT
TTCCGTTAAATCAGGTTAAATATGTACGATGGAATGGCGGGTCACATTGT
TTCGGGGATATATAAATCTAAATATTTATTTTTTGTACTTTAAGTGGATT
TGTTTTTACGAGACGAGAATTTAAAAATTTCGCGTGGATTAATTTTCGCG
AATCAAGGGTCTTCAAAATTTCAAGTGGATTAAAAAATTTCGCGAATTAG
GCCTTCTTTATTTGATTTCGCGACTACCACCATGTAAATCGAATAATTTT
AGAAAAGAGATGAAGGTAGACAAAGTCACTCAAAATCTTTCAAATAAACC
ACAAGGAAGGTACTCTTAGGAGGTTACTAGGGATTGAAAGTTTAAAATTG
AAATGAAAAGTTTAACTCGTTATGTGTTTTGATTGCAAACTTTTGAGAAT
GTCTACCTGGTTATTCCTTTGTTTTCGCGAACTTTTATTTTCTCGCTTGT
AACATTCCTGCGAATCAAGGGTCTTCAAAATTTTAACGTGGATTAAATTT
CACAAAATGGCCAAAATTCGCAAAAACGCAGAAATTAATCCACTGAAGGT
AATTTCTAATTTTTTGAATCTCGACTACAATTAAAAAAAACTTGAATCAC
AAGGGATTTTAGTTTCCATGGTCCAGGACCAAAAACTACTCAATCTTTAT
CAATTAGCTTTAGTATTAACGTTTTGTATATATTTAATAAAATTGTAAAT
TATCTTTTTTATATAAAATACACCTTCATAATAATCAAATAAAATAATCA
AAAGTAAA Coding sequence (CDS) from alignment at sc0000087_pilon:350533..355390- >MSTRG.11828.2.p1 ID=MSTRG.11828.2.p1|Name=MSTRG.11828.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2295bp|location=Sequence derived from alignment at sc0000087_pilon:350533..355390- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTATACACGATAGTCCACCGCCACCCTACACTGCCACCCCAATTACA
CCTCAACCACCCCACAATCCTAATTATTAGTATCCAATGATTCCGGCAGA
TCAAGCGCCTCAAATGCCACCTGCCCCTTTCCCTCCCACACATGCGTATC
CAAATAACGCCCAAGCACCGCCCAGATACGATTCACCGTACAGGGAGTTG
ATGAACGATGCACACCACACTGCTTATCATTCCAACACACCACACGGGAG
AAATGGTATCATGGATGCAAGCCTTGTCTACTGTTCCTCTTATGGTCAAC
CCCGCGCAGTCACCAACCAGTAGCCACCATTACACGTGGAGAAATCACAC
AGGTCAAACAAAGTACTGCATACCCTGGACGAAACAATGTTTTCGAAATA
GTACAGAAAAGTGGAGTCATCTGGTATTGCCAAGCTAGTTCACCGATGAA
ACAAAACACATTGTATACACGATAGTCCACCGCCACCCTACACTGCCACC
CCAATTACACCTCAACCACCCCACAATCCTAATTATTAGTATCCAATGAT
TCCGGCAGATCAAGCGCCTCAAATGCCACCTGCCCCTTTCCCTCCCACAC
ATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATACGATTCACCGTAC
AGGGAGTTGATGAACGATGCACACCACACTGCTTATCATTCCAACACACC
ACACGGGAGAAATGGTATCATGGATGCAAGCCTTGTCTACTGTTCCTCTT
ATGGTCAACCCCGCGCAGTCACCAACCAGTAGCCACCATTACACGTGGAG
AAATCACACAGGTCAAACAAAGTACTGCATACCCTGGACGAAACAATGTT
TTCGAAATAGTACAGAAAAGTGGAGTCATCTGGTATTGCCAAGCTAGTTC
ACCGATGAAACAAAACACATTGTATACACGATAGTCCACCGCCACCCTAC
ACTGCCACCCCAATTACACCTCAACCACCCCACAATCCTAATTATTAGTA
TCCAATGATTCCGGCAGATCAAGCGCCTCAAATGCCACCTGCCCCTTTCC
CTCCCACACATGCGTATCCAAATAACGCCCAAGCACCGCCCAGATACGAT
TCACCGTACAGGGAGTTGATGAACGATGCACACCACACTGCTTATCATTC
CAACACACCACACGGGAGAAATGGTATCATGGATGCAAGCCTTGTCTACT
GTTCCTCTTATGGTCAACCCCGCGCAGTCACCAACCAGTAGCCACCATTA
CACGTGGAGAAATCACACAGGTCAAACAAAGTACTGCATACCCTGGACGA
AACAATGTTTTCGAAATAGTACAGAAAAGTGGAGTCATCTGGTATTGCCA
AGCTAGTTCACCGATGAAACAAAACACATTGTATACACGATAGTCCACCG
CCACCCTACACTGCCACCCCAATTACACCTCAACCACCCCACAATCCTAA
TTATTAGTATCCAATGATTCCGGCAGATCAAGCGCCTCAAATGCCACCTG
CCCCTTTCCCTCCCACACATGCGTATCCAAATAACGCCCAAGCACCGCCC
AGATACGATTCACCGTACAGGGAGTTGATGAACGATGCACACCACACTGC
TTATCATTCCAACACACCACACGGGAGAAATGGTATCATGGATGCAAGCC
TTGTCTACTGTTCCTCTTATGGTCAACCCCGCGCAGTCACCAACCAGTAG
CCACCATTACACGTGGAGAAATCACACAGGTCAAACAAAGTACTGCATAC
CCTGGACGAAACAATGTTTTCGAAATAGTACAGAAAAGTGGAGTCATCTG
GTATTGCCAAGCTAGTTCACCGATGAAACAAAACACATTGTATACACGAT
AGTCCACCGCCACCCTACACTGCCACCCCAATTACACCTCAACCACCCCA
CAATCCTAATTATTAGTATCCAATGATTCCGGCAGATCAAGCGCCTCAAA
TGCCACCTGCCCCTTTCCCTCCCACACATGCGTATCCAAATAACGCCCAA
GCACCGCCCAGATACGATTCACCGTACAGGGAGTTGATGAACGATGCACA
CCACACTGCTTATCATTCCAACACACCACACGGGAGAAATGGTATCATGG
ATGCAAGCCTTGTCTACTGTTCCTCTTATGGTCAACCCCGCGCAGTCACC
AACCAGTAGCCACCATTACACGTGGAGAAATCACACAGGTCAAACAAAGT
ACTGCATACCCTGGACGAAACAATGTTTTCGAAATAGTACAGAAAAGTGG
AGTCATCTGGTATTGCCAAGCTAGTTCACCGATGAAACAAAACAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000087_pilon | genome | sc0000087_pilon:350533..355390 - |
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