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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:304413..308170+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11825.1.p1 ID=MSTRG.11825.1.p1|Name=MSTRG.11825.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3758bp|location=Sequence derived from alignment at sc0000087_pilon:304413..308170+ (Clytia hemisphaerica_ch_hm2_pilon)
CCAGGCAGATTTAGATGAAGGTTATATcctttttcctttgtttcatagaa
aatacaaaaaaaaagagaaaaaatgtcaGATTTCGTACTACTGAATATAA
GTAGCACAATATCACAATATGGATCTGAGAAAAGATTTGCTAAAGATTTG
CTCATCTCTGAGTTTAAGGTGAGTTTCCAAGTTTCCGTTGAAAAACagta
aaatttatttgatataagtttttcttttataccTCGTCTAATTTTTGACC
CACCGATTTAAATCCTTGCGCTAGAAGTTGCTCGAATGTAGATTTCGTAG
ACCGGTTTATTTGACCACACTCGACCCTAGCCCAAATTGTGGTTTGAATC
AATAGAGCTACCTCGATTTAATTCGACGAATTTTTCTCGTTTTCAATATC
TGTAACCAGAGTGTAGACTCAATTGCGAAACGGGTCCGAAGATTCTCAAT
GTCTTTACAGGAAACTGAATATAAAGAAAGTTTACTGATCGTGTATGACT
TTCACCTTCTTACTTATTCGGCAGGGTAAATTAGAGTTGATCACTGGTTG
TCAATCACAATGGATGAGATTGGAGCTGTATAACCAAGACAACGTTAAGA
TGGCTACCATGGATGATGAACGAATGCTGGGATTTTACTCACCTGAGGAC
CAATGGAGAGTACACGTTAGTCAAATTGCTTTTATATCACAATTTAATCA
TGCCCCTTGTATTACGATGAAGTGAATGCAGTCGCTCTGGTGTGGTCTTC
TGACCAATACTTCATTCCAACGTTGGAATCCACAAACTACTACACTTCAC
TAACGGAAAGTCTTGGGCTTGCAAATATTAATGTCTGTGATCTATagaat
tcacttccagctctGCCGAGTCACAATTGAGTTCTCGGGTTCCACATGGA
CCtgtagctcaatggtagagcaaatacCCGCTTATGGAATGGTTGTCAGT
TCGAGTCACGTCgaatccgttggttttccaacgttTCTGGTGGCTGGtaa
gaagacaacatgagatCGACTGTATATTCACTTCATTAAATAACAATTTG
ATTTTGCCTTATTCAATGCTTTCGTGGTCTCACTTAGCCAAACTTTTGTG
TGATTATTATGCTTCAACAATAAATTAGATAAAAAGTGGGGGAATTTAGG
ACTTTTTGTCTCCATCATTCAGTATCCGTTCTGTTTTCGCCAGAAGAGAA
GACAAATAGAATCGTATTCCCTTCAATCTCTTTCTCAGTTCACTTGTTTC
TGTTTTATCCCACTCGATCATATGAACATTTGTTTTTCGTAGTTTCCCGG
GAACAAAGAGTCTTGAACATTGGTcaattcgaaaatattttttgaacacT
ATTTTATAGACTTTCATCgcaatatttttcacttttctagGTAGTTGATA
CAAACCCTTCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAGTGGAA
AAGTATGAAATAAGTGAAGATGATTATAACAACAAGAAAGGTATAAAATG
AACTTCATTTCATGGACTTGTAATTTCCACACTATACCCATTTAAACTAA
CTGTAATTCGACATAATTTTCCACAACTCGATTTTCTGTCAATCGATGCT
CATATCACGATGGATCTGTACATAATATAATTTGCAACCTTCTCAGAAGG
TTAGAAAGCATAATTAGTAGCAAATTATGACGTCCTATATTAAGAAGCCA
ATGAATTTATTACTTTCCCTTTCATTTTCAGACAGCGTACGAAACTTCAT
GCGCATGAACAAAGTAGGGAATTTTTCTgaagaagccatcgaagccaaga
aacgtgaatttgaagaagaagaaaaagaaacacaacgcgccaaaactttc
aaaatcggTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACGTAG
AGGATGTGTAATGTTTATTGGTGAGTCGTTTAAGTTTCCCAATCATATAC
CgattcatttattcattcattcattcattcattcattcattcattcgcaC
ACAATAACCCGAGCTCTGATAAAACTCTGATAAGACTTTGACCCGGATTC
GATTTCTTTCTTTGGTTAAACTCATGACTACTGTGATTTTGAATACAAAA
GGATAACATATGGCGATTTCTTGAAAATGATATGACGgggtaactttttt
gtttccttACCTTAGGCGAAGTGGAATTCAAGCCAGGACATTGGATTGGT
GTAAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGGTATTcaataaa
agatttttcataaaatatccCTTGATTCATATTTTGAAGTAAATTCTATC
GAACAATATCGATCATTATCGTCCACCTCTAAGCAAAACGcactgtcgaa
tatttttagatatccgatagtaaaatatctcttttgtagcagcgagcata
aagaaaatagttttttggtataattatttaaatgtcacaaatataaaaac
agataaaagaaagttctttttaacaaaagagaaagaaaggaaattcgaac
gttttttaattaaagagagaaaaaaaaacaatgaaattgacatcCTTAAT
AAGatagtaaaacgttcgaaaatgttATACAAAGAGAGAAACAGGAGAAA
GACTGAATGAAGTAGGGGAAATTAAAATGCTTTTCTGCTAATTGGTGAAC
gataaaccatatattcaacgtgaaaaatcggatatcgaaattaTTCAGTC
TCGCTTAATGATATTCGACTCAGCTTCGCTTCgtcgaatatcatcaagct
cgactgaataattttcgatatccgatttttcttgtcgaatatctgcttaa
tatcaAATTCGGAGTGGAAAATCGGGACATGTTTTAAAATCACTGTTTGG
ATAAATAACTTTTATTCTTAATCTAGTATTTATTCCCTCTGCTCACAGCG
TAAAAGGGAAACGCTACTATCGAACAATATCTACAAAGAGAGTATTTTTA
GTTCAAGAATTGGGAAATTTTTCACCATGATTCTAAATCACTCTTTTATT
CCTAATGAATTAATTTCGCTCTTTTCTCAGCGTAAAAGGTATACGTTATT
TCACGTGTCAACAAAAATACGGAGGTTTTGTTCGGCCATCTCATTGTGAA
GTTGGAGATTTCCCTGAAGAAGATCTTGGCTTCAGTGATGATGAGATTGA
TGAAATGTAAATAACGCCATCCCGCCCCTGAGAAGCAGCACCCTAACGCC
TTCTGGCAAGTTAGAATTGCGCCTAGGAAGATGTACGGATAAATATTTTA
TATCGAAAATGGAAATTCTACGCCGATACAATTTTAACAATACAAGTTGG
GAGttaagaaatagaaaattcttGTCACGTGTGAATCGGAGATGCAATGG
TATTATTGAATGTTATGGTTTTATTGTGTCACTCACCAGAGATAAGATGA
TATGAATTCGACAGTTTGGCTTTGATTTTGTTGACAGAGATGAAGCTGTT
ATTTATCAATCTGAATCTAGAAAAATAGACTTTAATCGtttaatttgtgc
cttgaattttaatttattgacaattagtttttttgaattctgttttttat
tttgagacaAATGTAAATTGGTCTTTCTTGGTACCTTAAAGGTttagata
ttatattttttgaaattatcatTAGTTATGGTTATAGTTCCGTAGTATGA
TATTATCTTTTCGATTCAGATTTAGATTTATAAGAAGCATATATATGATA
AGTATTTAAAATTTCGAAGAGATTATTCctatatttcaatatttcaaaca
tACACATT Coding sequence (CDS) from alignment at sc0000087_pilon:304413..308170+ >MSTRG.11825.1.p1 ID=MSTRG.11825.1.p1|Name=MSTRG.11825.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4374bp|location=Sequence derived from alignment at sc0000087_pilon:304413..308170+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcaGATTTCGTACTACTGAATATAAGTAGCACAATATCACAATATGG
ATCTGAGAAAAGATTTGCTAAAGATTTGCTCATCTCTGAGTTTAAGGGTA
AATTAGAGTTGATCACTGGTTGTCAATCACAATGGATGAGATTGGAGCTG
TATAACCAAGACAACGTTAAGATGGCTACCATGGATGATGAACGAATGCT
GGGATTTTACTCACCTGAGGACCAATGGAGAGTACACGTAGTTGATACAA
ACCCTTCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAGTGGAAAAG
TATGAAATAAGTGAAGATGATTATAACAACAAGAAAGACAGCGTACGAAA
CTTCATGCGCATGAACAAAGTAGGGAATTTTTCTgaagaagccatcgaag
ccaagaaacgtgaatttgaagaagaagaaaaagaaacacaacgcgccaaa
actttcaaaatcggTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAA
ACGTAGAGGATGTGTAATGTTTATTGGCGAAGTGGAATTCAAGCCAGGAC
ATTGGATTGGTGTAAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGC
GTAAAAGGTATACGTTATTTCACGTGTCAACAAAAATACGGAGGTTTTGT
TCGGCCATCTCATTGTGAAGTTGGAGATTTCCCTGAAGAAGATCTTGGCT
TCAGTGATGATGAGATTGATGAAATGTAAatgtcaGATTTCGTACTACTG
AATATAAGTAGCACAATATCACAATATGGATCTGAGAAAAGATTTGCTAA
AGATTTGCTCATCTCTGAGTTTAAGGGTAAATTAGAGTTGATCACTGGTT
GTCAATCACAATGGATGAGATTGGAGCTGTATAACCAAGACAACGTTAAG
ATGGCTACCATGGATGATGAACGAATGCTGGGATTTTACTCACCTGAGGA
CCAATGGAGAGTACACGTAGTTGATACAAACCCTTCGTCAGTGAAAGGAG
AATTCGATGATTTATCCAAAGTGGAAAAGTATGAAATAAGTGAAGATGAT
TATAACAACAAGAAAGACAGCGTACGAAACTTCATGCGCATGAACAAAGT
AGGGAATTTTTCTgaagaagccatcgaagccaagaaacgtgaatttgaag
aagaagaaaaagaaacacaacgcgccaaaactttcaaaatcggTGATCGA
TGCGAAACGTCAGTGCCGAAACAACAAAAACGTAGAGGATGTGTAATGTT
TATTGGCGAAGTGGAATTCAAGCCAGGACATTGGATTGGTGTAAAGTACG
ATGAACCTCTTGGTAAAAATGATGGAAGCGTAAAAGGTATACGTTATTTC
ACGTGTCAACAAAAATACGGAGGTTTTGTTCGGCCATCTCATTGTGAAGT
TGGAGATTTCCCTGAAGAAGATCTTGGCTTCAGTGATGATGAGATTGATG
AAATGTAAatgtcaGATTTCGTACTACTGAATATAAGTAGCACAATATCA
CAATATGGATCTGAGAAAAGATTTGCTAAAGATTTGCTCATCTCTGAGTT
TAAGGGTAAATTAGAGTTGATCACTGGTTGTCAATCACAATGGATGAGAT
TGGAGCTGTATAACCAAGACAACGTTAAGATGGCTACCATGGATGATGAA
CGAATGCTGGGATTTTACTCACCTGAGGACCAATGGAGAGTACACGTAGT
TGATACAAACCCTTCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAG
TGGAAAAGTATGAAATAAGTGAAGATGATTATAACAACAAGAAAGACAGC
GTACGAAACTTCATGCGCATGAACAAAGTAGGGAATTTTTCTgaagaagc
catcgaagccaagaaacgtgaatttgaagaagaagaaaaagaaacacaac
gcgccaaaactttcaaaatcggTGATCGATGCGAAACGTCAGTGCCGAAA
CAACAAAAACGTAGAGGATGTGTAATGTTTATTGGCGAAGTGGAATTCAA
GCCAGGACATTGGATTGGTGTAAAGTACGATGAACCTCTTGGTAAAAATG
ATGGAAGCGTAAAAGGTATACGTTATTTCACGTGTCAACAAAAATACGGA
GGTTTTGTTCGGCCATCTCATTGTGAAGTTGGAGATTTCCCTGAAGAAGA
TCTTGGCTTCAGTGATGATGAGATTGATGAAATGTAAatgtcaGATTTCG
TACTACTGAATATAAGTAGCACAATATCACAATATGGATCTGAGAAAAGA
TTTGCTAAAGATTTGCTCATCTCTGAGTTTAAGGGTAAATTAGAGTTGAT
CACTGGTTGTCAATCACAATGGATGAGATTGGAGCTGTATAACCAAGACA
ACGTTAAGATGGCTACCATGGATGATGAACGAATGCTGGGATTTTACTCA
CCTGAGGACCAATGGAGAGTACACGTAGTTGATACAAACCCTTCGTCAGT
GAAAGGAGAATTCGATGATTTATCCAAAGTGGAAAAGTATGAAATAAGTG
AAGATGATTATAACAACAAGAAAGACAGCGTACGAAACTTCATGCGCATG
AACAAAGTAGGGAATTTTTCTgaagaagccatcgaagccaagaaacgtga
atttgaagaagaagaaaaagaaacacaacgcgccaaaactttcaaaatcg
gTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACGTAGAGGATGT
GTAATGTTTATTGGCGAAGTGGAATTCAAGCCAGGACATTGGATTGGTGT
AAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGCGTAAAAGGTATAC
GTTATTTCACGTGTCAACAAAAATACGGAGGTTTTGTTCGGCCATCTCAT
TGTGAAGTTGGAGATTTCCCTGAAGAAGATCTTGGCTTCAGTGATGATGA
GATTGATGAAATGTAAatgtcaGATTTCGTACTACTGAATATAAGTAGCA
CAATATCACAATATGGATCTGAGAAAAGATTTGCTAAAGATTTGCTCATC
TCTGAGTTTAAGGGTAAATTAGAGTTGATCACTGGTTGTCAATCACAATG
GATGAGATTGGAGCTGTATAACCAAGACAACGTTAAGATGGCTACCATGG
ATGATGAACGAATGCTGGGATTTTACTCACCTGAGGACCAATGGAGAGTA
CACGTAGTTGATACAAACCCTTCGTCAGTGAAAGGAGAATTCGATGATTT
ATCCAAAGTGGAAAAGTATGAAATAAGTGAAGATGATTATAACAACAAGA
AAGACAGCGTACGAAACTTCATGCGCATGAACAAAGTAGGGAATTTTTCT
gaagaagccatcgaagccaagaaacgtgaatttgaagaagaagaaaaaga
aacacaacgcgccaaaactttcaaaatcggTGATCGATGCGAAACGTCAG
TGCCGAAACAACAAAAACGTAGAGGATGTGTAATGTTTATTGGCGAAGTG
GAATTCAAGCCAGGACATTGGATTGGTGTAAAGTACGATGAACCTCTTGG
TAAAAATGATGGAAGCGTAAAAGGTATACGTTATTTCACGTGTCAACAAA
AATACGGAGGTTTTGTTCGGCCATCTCATTGTGAAGTTGGAGATTTCCCT
GAAGAAGATCTTGGCTTCAGTGATGATGAGATTGATGAAATGTAAatgtc
aGATTTCGTACTACTGAATATAAGTAGCACAATATCACAATATGGATCTG
AGAAAAGATTTGCTAAAGATTTGCTCATCTCTGAGTTTAAGGGTAAATTA
GAGTTGATCACTGGTTGTCAATCACAATGGATGAGATTGGAGCTGTATAA
CCAAGACAACGTTAAGATGGCTACCATGGATGATGAACGAATGCTGGGAT
TTTACTCACCTGAGGACCAATGGAGAGTACACGTAGTTGATACAAACCCT
TCGTCAGTGAAAGGAGAATTCGATGATTTATCCAAAGTGGAAAAGTATGA
AATAAGTGAAGATGATTATAACAACAAGAAAGACAGCGTACGAAACTTCA
TGCGCATGAACAAAGTAGGGAATTTTTCTgaagaagccatcgaagccaag
aaacgtgaatttgaagaagaagaaaaagaaacacaacgcgccaaaacttt
caaaatcggTGATCGATGCGAAACGTCAGTGCCGAAACAACAAAAACGTA
GAGGATGTGTAATGTTTATTGGCGAAGTGGAATTCAAGCCAGGACATTGG
ATTGGTGTAAAGTACGATGAACCTCTTGGTAAAAATGATGGAAGCGTAAA
AGGTATACGTTATTTCACGTGTCAACAAAAATACGGAGGTTTTGTTCGGC
CATCTCATTGTGAAGTTGGAGATTTCCCTGAAGAAGATCTTGGCTTCAGT
GATGATGAGATTGATGAAATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:304413..308170 + |
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