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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:177841..180462+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11814.1.p1 ID=MSTRG.11814.1.p1|Name=MSTRG.11814.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2622bp|location=Sequence derived from alignment at sc0000087_pilon:177841..180462+ (Clytia hemisphaerica_ch_hm2_pilon)
TACAGATTCGTTGTATTTCAGTTGAAAATCCAAAATGTCACTGTTGGCAC
GTCAATCAAGTAAACTTTTGAGGTTAGCCTCAACCCGAGCTTTTCAAAAG
CAAGCAATCCAAGTCTCTGCACTCTCGACAAGCTCTGCAAGATTGGGTGA
GTAATCTTATTCACTTTACCTCGTGTTaacttctaaatattttttacctA
GTTTTTTGCTGTATATAACTCTTTGCTTCAGAATCAGTCTATTTATAAAT
TTCTGTTCTGTATCCATGCTTTCATTTTTGGTAATCAGCAATAAtcattt
ttagacaaaaagttGTTTACACCTGGTCCACTTGGTGTCAatcatgaaac
aaaaacagCAATGCTGAGAGATCTTGGTTCTAGAGATGTTGAATTTATGA
ACACAGTCAAATACATCAGACAGCGTGTTTTAGAGGTTGCTGGAATTTCA
ACAGATACTTATACTATGGTCCCAATGCAAGGGAGTGGTACTTTTGCTAT
AGAAGGTGTCATCCAGACAATGATTCCACGTCAAGGTGGCAAGTTGTTGA
TTGCCACTTCTGGTTCTTATGGTCTGAGAATGGAACAAATTGCTAAATAT
TTGGATATTGAAACGGTAAAAGTCAAgtttaaaagaaagagaaaaagaaa
aaccttttcaGCTTGAAGAGCTCTCTTGATAAAATATCAATACTCTAATG
CATTTGAAACCAGACTAAACGTAACctataatttgtaaaaaatcacGGAA
GAAACACACATCTCTCAAATATTAATATTGTTGACTGTTATTGttgcttt
gtttttctttttttgtcatcACAATATTTTGTTTCTCTATTCAGACTTTG
TTGAAATTCAACGAAGATAAGAAAGTGGACGTATCAGTGGTAGAAGAGGC
TTTGAAAGCTGATCCATCCATCACTCACGTCTCAATGGTGCACTGTGAAA
CCTCTTCAGGAGTTGTCCACCCTGTTGAAGAAGTTGCCTCGATGGTGAAG
AGAGTCTCCCCTAATGCTGTCTTTTTCATTGATGCAATGAGCAGTTTCGG
AGGCGTTCCTTTAGAAGTTTCGAATATTGATTTTCTTGTTACATCAGCTA
ATAAGTGCTTGGAAGGTGTCCCTGGGTTTGGTGTCGTCATTGCACGAAAA
GACAAATTAATGGAGTGTAAAGGAAATTCGAGAAGTTTGAGTTTGGATGT
TTATGAGCAATATTTAGGATTGGAGAGTAATGGACAGTTCCGCTTCACAC
CACCAACGCATACTATTTTGGGGTTCAAGAAAGCTGTTGAATGTTGGGAG
CAAGAAGGAGGTGTTCAAGGCCGATCAAATAGGTTTGTTATAAAGCTTTA
TACTGCCTTGTACATTTTACTCTATTATTAATGTCAGGGATGTCAGCTTT
CTCTAAATCAATCTGCTATTCATTATGCTTAAAACGGCTTGAAGAATGAT
AATGAGATCACGTCATTGAAGCTACACATTTCTCAATACTTGATCCGATA
ATTGAATTAGCTGCaaaaaaaGTTCCATTCCATTAATATGTCTGTGATCT
AACTTGTACTTTCGTATATTTGTAAGAAAACTCAAACTCTCCATTCGTTA
TGAAATTTGAAACCTGACCTATAACATATGCCATGCCACTCAAAAAAGTC
ATCTCTGTTTTCAGGTATCAAGAAAATCGACGAATTTTGCGAGAAGGGAT
GGCTAAAATGGGCTTCAAAGAATTTCTATCAAGCGATCACACCGGTTATA
TTATCACATCCTTTTTCTTTCCTCAAAACCCTAATTTCGATTTCGTCAAA
TTCTACACCCGTCTGTCCGACATGAATATGGTCATTTATCCCGGAAAGGT
TACGGAAGCTGACTCGTTCCGTATCGGAAACATTGGTGATCTTCATCCGA
AGGATATGACAGAGCTTTTAGTTTGTATCGAAACAGTTTGCCAGGAAATG
GGACTTTCTCTACCTTTACAATAAAACGTTGGAATTAAACCAACaaaaaa
aCCTTATCTGCCAACTTATTCCTGGTCGGATTTTAACTTTTGGGGTTGTA
TTATATTGGTTATGAAGACTAACAATCAACATACATGGGCTGGATTAACA
ATCGACGGACAGGGATGTTCTATTTATCTTTCTTACCACAGTTGggatga
aaattatatttaaattacctcaaaaggaaatatttaaatcaAGGGGgagg
taaatttttttattatttctttttacggatattttgttctgttttgtcta
aacgcattcaccgtttttGAGGTTTTGGAAGATTTTCCAGTTTTCAAGCT
TATCGAAGCGATTTTTTATATAACTTGTCTGGCATTTATTGTCTTTCAAA
GCTTGGCATTAATTGTCGTTCGAGACCTCTAGTTGTCTTTAGAAAAGGTT
TTCTCTtggtattttatttttgtattatttacAATTATGTAATGTTGATG
TAGTGTTTCTTATTTGTGgtgtagtttttgtttttatcttggTGTGTATA
TCATATTTGTCATAAAttcgttttgttttgaaacaTGAAACTTTAGCATG
CAATCACTTCCCGAAGAGTTAGATTTATGATGGGTACCTAAATTTGTGTG
AATTTGTCTTGTAGAAAAGGTC Coding sequence (CDS) from alignment at sc0000087_pilon:177841..180462+ >MSTRG.11814.1.p1 ID=MSTRG.11814.1.p1|Name=MSTRG.11814.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4884bp|location=Sequence derived from alignment at sc0000087_pilon:177841..180462+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACTGTTGGCACGTCAATCAAGTAAACTTTTGAGGTTAGCCTCAAC
CCGAGCTTTTCAAAAGCAAGCAATCCAAGTCTCTGCACTCTCGACAAGCT
CTGCAAGATTGGacaaaaagttGTTTACACCTGGTCCACTTGGTGTCAat
catgaaacaaaaacagCAATGCTGAGAGATCTTGGTTCTAGAGATGTTGA
ATTTATGAACACAGTCAAATACATCAGACAGCGTGTTTTAGAGGTTGCTG
GAATTTCAACAGATACTTATACTATGGTCCCAATGCAAGGGAGTGGTACT
TTTGCTATAGAAGGTGTCATCCAGACAATGATTCCACGTCAAGGTGGCAA
GTTGTTGATTGCCACTTCTGGTTCTTATGGTCTGAGAATGGAACAAATTG
CTAAATATTTGGATATTGAAACGACTTTGTTGAAATTCAACGAAGATAAG
AAAGTGGACGTATCAGTGGTAGAAGAGGCTTTGAAAGCTGATCCATCCAT
CACTCACGTCTCAATGGTGCACTGTGAAACCTCTTCAGGAGTTGTCCACC
CTGTTGAAGAAGTTGCCTCGATGGTGAAGAGAGTCTCCCCTAATGCTGTC
TTTTTCATTGATGCAATGAGCAGTTTCGGAGGCGTTCCTTTAGAAGTTTC
GAATATTGATTTTCTTGTTACATCAGCTAATAAGTGCTTGGAAGGTGTCC
CTGGGTTTGGTGTCGTCATTGCACGAAAAGACAAATTAATGGAGTGTAAA
GGAAATTCGAGAAGTTTGAGTTTGGATGTTTATGAGCAATATTTAGGATT
GGAGAGTAATGGACAGTTCCGCTTCACACCACCAACGCATACTATTTTGG
GGTTCAAGAAAGCTGTTGAATGTTGGGAGCAAGAAGGAGGTGTTCAAGGC
CGATCAAATAGGTATCAAGAAAATCGACGAATTTTGCGAGAAGGGATGGC
TAAAATGGGCTTCAAAGAATTTCTATCAAGCGATCACACCGGTTATATTA
TCACATCCTTTTTCTTTCCTCAAAACCCTAATTTCGATTTCGTCAAATTC
TACACCCGTCTGTCCGACATGAATATGGTCATTTATCCCGGAAAGGTTAC
GGAAGCTGACTCGTTCCGTATCGGAAACATTGGTGATCTTCATCCGAAGG
ATATGACAGAGCTTTTAGTTTGTATCGAAACAGTTTGCCAGGAAATGGGA
CTTTCTCTACCTTTACAATAAATGTCACTGTTGGCACGTCAATCAAGTAA
ACTTTTGAGGTTAGCCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAG
TCTCTGCACTCTCGACAAGCTCTGCAAGATTGGacaaaaagttGTTTACA
CCTGGTCCACTTGGTGTCAatcatgaaacaaaaacagCAATGCTGAGAGA
TCTTGGTTCTAGAGATGTTGAATTTATGAACACAGTCAAATACATCAGAC
AGCGTGTTTTAGAGGTTGCTGGAATTTCAACAGATACTTATACTATGGTC
CCAATGCAAGGGAGTGGTACTTTTGCTATAGAAGGTGTCATCCAGACAAT
GATTCCACGTCAAGGTGGCAAGTTGTTGATTGCCACTTCTGGTTCTTATG
GTCTGAGAATGGAACAAATTGCTAAATATTTGGATATTGAAACGACTTTG
TTGAAATTCAACGAAGATAAGAAAGTGGACGTATCAGTGGTAGAAGAGGC
TTTGAAAGCTGATCCATCCATCACTCACGTCTCAATGGTGCACTGTGAAA
CCTCTTCAGGAGTTGTCCACCCTGTTGAAGAAGTTGCCTCGATGGTGAAG
AGAGTCTCCCCTAATGCTGTCTTTTTCATTGATGCAATGAGCAGTTTCGG
AGGCGTTCCTTTAGAAGTTTCGAATATTGATTTTCTTGTTACATCAGCTA
ATAAGTGCTTGGAAGGTGTCCCTGGGTTTGGTGTCGTCATTGCACGAAAA
GACAAATTAATGGAGTGTAAAGGAAATTCGAGAAGTTTGAGTTTGGATGT
TTATGAGCAATATTTAGGATTGGAGAGTAATGGACAGTTCCGCTTCACAC
CACCAACGCATACTATTTTGGGGTTCAAGAAAGCTGTTGAATGTTGGGAG
CAAGAAGGAGGTGTTCAAGGCCGATCAAATAGGTATCAAGAAAATCGACG
AATTTTGCGAGAAGGGATGGCTAAAATGGGCTTCAAAGAATTTCTATCAA
GCGATCACACCGGTTATATTATCACATCCTTTTTCTTTCCTCAAAACCCT
AATTTCGATTTCGTCAAATTCTACACCCGTCTGTCCGACATGAATATGGT
CATTTATCCCGGAAAGGTTACGGAAGCTGACTCGTTCCGTATCGGAAACA
TTGGTGATCTTCATCCGAAGGATATGACAGAGCTTTTAGTTTGTATCGAA
ACAGTTTGCCAGGAAATGGGACTTTCTCTACCTTTACAATAAATGTCACT
GTTGGCACGTCAATCAAGTAAACTTTTGAGGTTAGCCTCAACCCGAGCTT
TTCAAAAGCAAGCAATCCAAGTCTCTGCACTCTCGACAAGCTCTGCAAGA
TTGGacaaaaagttGTTTACACCTGGTCCACTTGGTGTCAatcatgaaac
aaaaacagCAATGCTGAGAGATCTTGGTTCTAGAGATGTTGAATTTATGA
ACACAGTCAAATACATCAGACAGCGTGTTTTAGAGGTTGCTGGAATTTCA
ACAGATACTTATACTATGGTCCCAATGCAAGGGAGTGGTACTTTTGCTAT
AGAAGGTGTCATCCAGACAATGATTCCACGTCAAGGTGGCAAGTTGTTGA
TTGCCACTTCTGGTTCTTATGGTCTGAGAATGGAACAAATTGCTAAATAT
TTGGATATTGAAACGACTTTGTTGAAATTCAACGAAGATAAGAAAGTGGA
CGTATCAGTGGTAGAAGAGGCTTTGAAAGCTGATCCATCCATCACTCACG
TCTCAATGGTGCACTGTGAAACCTCTTCAGGAGTTGTCCACCCTGTTGAA
GAAGTTGCCTCGATGGTGAAGAGAGTCTCCCCTAATGCTGTCTTTTTCAT
TGATGCAATGAGCAGTTTCGGAGGCGTTCCTTTAGAAGTTTCGAATATTG
ATTTTCTTGTTACATCAGCTAATAAGTGCTTGGAAGGTGTCCCTGGGTTT
GGTGTCGTCATTGCACGAAAAGACAAATTAATGGAGTGTAAAGGAAATTC
GAGAAGTTTGAGTTTGGATGTTTATGAGCAATATTTAGGATTGGAGAGTA
ATGGACAGTTCCGCTTCACACCACCAACGCATACTATTTTGGGGTTCAAG
AAAGCTGTTGAATGTTGGGAGCAAGAAGGAGGTGTTCAAGGCCGATCAAA
TAGGTATCAAGAAAATCGACGAATTTTGCGAGAAGGGATGGCTAAAATGG
GCTTCAAAGAATTTCTATCAAGCGATCACACCGGTTATATTATCACATCC
TTTTTCTTTCCTCAAAACCCTAATTTCGATTTCGTCAAATTCTACACCCG
TCTGTCCGACATGAATATGGTCATTTATCCCGGAAAGGTTACGGAAGCTG
ACTCGTTCCGTATCGGAAACATTGGTGATCTTCATCCGAAGGATATGACA
GAGCTTTTAGTTTGTATCGAAACAGTTTGCCAGGAAATGGGACTTTCTCT
ACCTTTACAATAAATGTCACTGTTGGCACGTCAATCAAGTAAACTTTTGA
GGTTAGCCTCAACCCGAGCTTTTCAAAAGCAAGCAATCCAAGTCTCTGCA
CTCTCGACAAGCTCTGCAAGATTGGacaaaaagttGTTTACACCTGGTCC
ACTTGGTGTCAatcatgaaacaaaaacagCAATGCTGAGAGATCTTGGTT
CTAGAGATGTTGAATTTATGAACACAGTCAAATACATCAGACAGCGTGTT
TTAGAGGTTGCTGGAATTTCAACAGATACTTATACTATGGTCCCAATGCA
AGGGAGTGGTACTTTTGCTATAGAAGGTGTCATCCAGACAATGATTCCAC
GTCAAGGTGGCAAGTTGTTGATTGCCACTTCTGGTTCTTATGGTCTGAGA
ATGGAACAAATTGCTAAATATTTGGATATTGAAACGACTTTGTTGAAATT
CAACGAAGATAAGAAAGTGGACGTATCAGTGGTAGAAGAGGCTTTGAAAG
CTGATCCATCCATCACTCACGTCTCAATGGTGCACTGTGAAACCTCTTCA
GGAGTTGTCCACCCTGTTGAAGAAGTTGCCTCGATGGTGAAGAGAGTCTC
CCCTAATGCTGTCTTTTTCATTGATGCAATGAGCAGTTTCGGAGGCGTTC
CTTTAGAAGTTTCGAATATTGATTTTCTTGTTACATCAGCTAATAAGTGC
TTGGAAGGTGTCCCTGGGTTTGGTGTCGTCATTGCACGAAAAGACAAATT
AATGGAGTGTAAAGGAAATTCGAGAAGTTTGAGTTTGGATGTTTATGAGC
AATATTTAGGATTGGAGAGTAATGGACAGTTCCGCTTCACACCACCAACG
CATACTATTTTGGGGTTCAAGAAAGCTGTTGAATGTTGGGAGCAAGAAGG
AGGTGTTCAAGGCCGATCAAATAGGTATCAAGAAAATCGACGAATTTTGC
GAGAAGGGATGGCTAAAATGGGCTTCAAAGAATTTCTATCAAGCGATCAC
ACCGGTTATATTATCACATCCTTTTTCTTTCCTCAAAACCCTAATTTCGA
TTTCGTCAAATTCTACACCCGTCTGTCCGACATGAATATGGTCATTTATC
CCGGAAAGGTTACGGAAGCTGACTCGTTCCGTATCGGAAACATTGGTGAT
CTTCATCCGAAGGATATGACAGAGCTTTTAGTTTGTATCGAAACAGTTTG
CCAGGAAATGGGACTTTCTCTACCTTTACAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:177841..180462 + |
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