|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:134790..138053+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11810.1.p1 ID=MSTRG.11810.1.p1|Name=MSTRG.11810.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3264bp|location=Sequence derived from alignment at sc0000087_pilon:134790..138053+ (Clytia hemisphaerica_ch_hm2_pilon)
tttaaggatagGGACGAGTGCAAAAGAAAACATCATCTTGTGTGAGAAGT
TTCGTTATTGGTAGCAGAAGAGtgctttaaagaaaatttactgTTTGCAG
CGTCAAGGATCTTTTTAAATTACTCTGGTttatgtaaatttgaatttgtt
ttgaagATCAAGGTAAGAATTTCACTTTTAAAGATGAACATTGTTTATAT
TAGTATTAGGAACCTTGTAAGGATTTAATTTTCTCCTGACTATTCTgaca
tattttataaaaatcgaCAAGGGCCTTTGGAATATTAAATAGTGAAAAAT
ACAGCAATTTTCTCTTTAATATTAACGTTTTAGAGTGATTGACTAATGAT
GTCAGGGAGATTATGGATTGGAAGATATGTTCACTGAAGTgaaaggcaag
aaaaaccgcaagaagaaaaaccttccaaaagagtttgaacctggagaaaa
aaaaGAGGAGATCCCAAACCATTTGCTTTGTCCCCAATGCAAGGAAATGT
TCGTTATTCCCACTTTACTACCATGTATGGACACTTTCTGTCATGAATGC
CTCCTTAAATTAATTCCTGAGCCAGAACCACAAGCAAACAACCAGGCAGC
ACCACCTGAGGGTAATAACCAAGCTGTACCACAAGATGGCGCTGCACCGC
CAGTCGCTGAGGTTGCGCCGCCGCCAGTAGAGCCAGTTGTGGAACAGAAG
CCACCAGATGTGATGGTAGCGTGTCCAACTTGTCAGAAGGAAGTCAAGGT
ATTTAATGAAGTTATAATTACTTTCTCTTTTAGAAATAATGGGAATCTTG
AGAAATCAATAGAGAGCTCGTTTTAAACGAGGGCAGACAGTGTTTGAAAG
TCTTGTTGGATTTCTATAGCTttagatttttgttaaaaagctTGAGTAAC
GATTGcgagtttgaaatttcttttctccCTATTTTCATGATTAGGCAGAT
ACGATTAAAAACGAAGAGCTTCCTATCCAATATCTCTTCCAAAATGAGAT
CGAGGCTTACAAATCAAGGGAAGCAGGTGGGCCTCGTTGTGGAGAATGCA
TTGAGCAGAACGAGGTTGTTGGATATTGTATCACGTGCTCATTATCTATG
TGTCAAGAATGCCAAAGAAGCCATCAAAGGTTGACAAAGTTTGTTAATCA
TAAGATCAAAAATGCCGACCAGGTCTCAGAGGACCAACTTCTGAAGGTAA
TATCAAGGTGTTTTTTAGTAACTGCAAAATCGAGGAGGGAACTTAGATAC
TTTAAAGCTCAAGGTGATTatttaagaaaaactttttggaaaacGTTCAA
ATTGAAGTTAAAAAATATTAGTGTTAGCAAAGGGAAAAACCAATCCTATA
GTTTACTTTTTGCGTGTGTTTATAATTAAATTGGAGAATGGGAGCTGTTG
ATCATGAACAAAATAGTATGGACCAATCACCTCATATCTTTTTCTTTAAG
GGATGCAAAAAATACTGTGACGCACATAACAACGAATTTGAGTTGAGATA
TTTCTGTACTAATACAGAATGTAAGAAACTCATCTGTTCTGAGTGCAAAG
ACAGCAAGAAACACAGAACCCATGAAGTGTTCTTAGCATCTGATGTTCTG
GACGATACCAAAGTTTTGGTGGATGGCAAAATCAACATTGGTAACAATGC
TTCAAAAAACCTCCACGAATTTTTGAAAGTCAGCGAAAAGGtaagtgttt
ttattcaaattaaacACAAGGCTTTTTAAACTCTGTAAGTCATAccaaaa
ctttgaatttgtaaACATTCTGAGTAGAGTTACAGGGACGGGACCATAAG
AGTCTCATGATACCATAATGGATGCCAATTGGttgatacagttgacgctc
tctaatttgacattctactattcgatgtgctccattattcgataacaTTA
AAAGtcatcgtcaacaagaaactctcccTAATCgatacactcccttattc
gacaaaaattaaatctaatTTCCTTTAACAATCGAATCAAGGAGGGTCAA
CTGTATTAAAAGGTTTGAAAGTGGTTTTAGGGTTAACGTTTCATATGAGA
CATATTTCATTactatcaattttattttgtattaaTAGGTGGTTCAACAA
AGTGAAGTTGACAAGAACAAGTCCATCTGTGCTATCGAGCAATCCTTCAC
TAGCCTGGAGAACATGTTGAAAgagcaaaagaagaaattaatcGAACAAA
TCACACAAAATCATGAAGCTGGTAAGAAGTCACTGGAGAAAGGGAAGATT
GATGCCAGCACTTTGAGGAAATTGTTGGATTATGCAGCAATGGCGCTTGA
TGCAGCTGGGCTGTTTGGTAACATTGAGGTGAGGGTGTATTAGATTTATT
TACGATCCGATCAGTCCCCCTCATGAATAGTTAGAATTTTACATTTATTA
AAAGCTTGGATTCTTAGCCCTTGCTGAGGCAAGACATCATTCGTTATCTA
GTGTTTTACTATTAGTAAGCACTGCTCTATAAGATTGAGAAACTAAAGAA
ATTCATAGAACGATGTCCAAGTATTTTCTATCAGGAGATAGGGTGACAGA
GCAGGTGTAATCATTTTGTCTTTACTGAGGCTTCTCAGCACTGCGTACTG
CACCCTGGATGAGTAGATCGAATTGCAGAGCATCTCAGCGCCATAAAACT
AGTTGTGGCGCAGACTGAAAAAAGAAGTGGACATAAGGGAAATTCCATGG
GGAATTCTGTGAATGACTCCTAATAATATAACATAAATTCTTCGCATTAT
TTTAAAGGTGATAACAGAACTTGGTAAACAAATCGAGCAAATGTATGAAC
ACTTAGCAGTCGATCAGATCAATGAGACAGCTATCACAATCCCTGCTGAT
GGTGTTGCAGCTAACGAACCAACAGTTGAAGTGTTTGGTGTTCTAAACAC
CATCTTCAATCAAAACAAGGGGAATGTTAGTGTCCAGGTCACCAAAAAGA
CGGTCACCGCCAAAACTGACGCGCTGACCACCATTACCAATACCTGTAAA
CAAGCTATGGaacttttcaatcaaaattgaaaataaaactgcACAGAATT
GTGAGTGTTGAGATAAACACTATAAATATGTCATCAAATTGCTACAACGA
ATTTTTCAGCCTGGATTTTTTACGATAGCATTTGCAAACTAGTTTGatta
cttttaaaatgtttaggAGTTATTTGAAGCacattgttaattttttttat
tttttgtaattttctaagAAAGATAACTTTCAATTCTTTATAAGTAACTC
ACAAGAGATTCATA Coding sequence (CDS) from alignment at sc0000087_pilon:134790..138053+ >MSTRG.11810.1.p1 ID=MSTRG.11810.1.p1|Name=MSTRG.11810.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6885bp|location=Sequence derived from alignment at sc0000087_pilon:134790..138053+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCACTGAAGTgaaaggcaagaaaaaccgcaagaagaaaaaccttcc
aaaagagtttgaacctggagaaaaaaaaGAGGAGATCCCAAACCATTTGC
TTTGTCCCCAATGCAAGGAAATGTTCGTTATTCCCACTTTACTACCATGT
ATGGACACTTTCTGTCATGAATGCCTCCTTAAATTAATTCCTGAGCCAGA
ACCACAAGCAAACAACCAGGCAGCACCACCTGAGGGTAATAACCAAGCTG
TACCACAAGATGGCGCTGCACCGCCAGTCGCTGAGGTTGCGCCGCCGCCA
GTAGAGCCAGTTGTGGAACAGAAGCCACCAGATGTGATGGTAGCGTGTCC
AACTTGTCAGAAGGAAGTCAAGGCAGATACGATTAAAAACGAAGAGCTTC
CTATCCAATATCTCTTCCAAAATGAGATCGAGGCTTACAAATCAAGGGAA
GCAGGTGGGCCTCGTTGTGGAGAATGCATTGAGCAGAACGAGGTTGTTGG
ATATTGTATCACGTGCTCATTATCTATGTGTCAAGAATGCCAAAGAAGCC
ATCAAAGGTTGACAAAGTTTGTTAATCATAAGATCAAAAATGCCGACCAG
GTCTCAGAGGACCAACTTCTGAAGGGATGCAAAAAATACTGTGACGCACA
TAACAACGAATTTGAGTTGAGATATTTCTGTACTAATACAGAATGTAAGA
AACTCATCTGTTCTGAGTGCAAAGACAGCAAGAAACACAGAACCCATGAA
GTGTTCTTAGCATCTGATGTTCTGGACGATACCAAAGTTTTGGTGGATGG
CAAAATCAACATTGGTAACAATGCTTCAAAAAACCTCCACGAATTTTTGA
AAGTCAGCGAAAAGGTGGTTCAACAAAGTGAAGTTGACAAGAACAAGTCC
ATCTGTGCTATCGAGCAATCCTTCACTAGCCTGGAGAACATGTTGAAAga
gcaaaagaagaaattaatcGAACAAATCACACAAAATCATGAAGCTGGTA
AGAAGTCACTGGAGAAAGGGAAGATTGATGCCAGCACTTTGAGGAAATTG
TTGGATTATGCAGCAATGGCGCTTGATGCAGCTGGGCTGTTTGGTAACAT
TGAGGTGATAACAGAACTTGGTAAACAAATCGAGCAAATGTATGAACACT
TAGCAGTCGATCAGATCAATGAGACAGCTATCACAATCCCTGCTGATGGT
GTTGCAGCTAACGAACCAACAGTTGAAGTGTTTGGTGTTCTAAACACCAT
CTTCAATCAAAACAAGGGGAATGTTAGTGTCCAGGTCACCAAAAAGACGG
TCACCGCCAAAACTGACGCGCTGACCACCATTACCAATACCTGTAAACAA
GCTATGGaacttttcaatcaaaattgaATGTTCACTGAAGTgaaaggcaa
gaaaaaccgcaagaagaaaaaccttccaaaagagtttgaacctggagaaa
aaaaaGAGGAGATCCCAAACCATTTGCTTTGTCCCCAATGCAAGGAAATG
TTCGTTATTCCCACTTTACTACCATGTATGGACACTTTCTGTCATGAATG
CCTCCTTAAATTAATTCCTGAGCCAGAACCACAAGCAAACAACCAGGCAG
CACCACCTGAGGGTAATAACCAAGCTGTACCACAAGATGGCGCTGCACCG
CCAGTCGCTGAGGTTGCGCCGCCGCCAGTAGAGCCAGTTGTGGAACAGAA
GCCACCAGATGTGATGGTAGCGTGTCCAACTTGTCAGAAGGAAGTCAAGG
CAGATACGATTAAAAACGAAGAGCTTCCTATCCAATATCTCTTCCAAAAT
GAGATCGAGGCTTACAAATCAAGGGAAGCAGGTGGGCCTCGTTGTGGAGA
ATGCATTGAGCAGAACGAGGTTGTTGGATATTGTATCACGTGCTCATTAT
CTATGTGTCAAGAATGCCAAAGAAGCCATCAAAGGTTGACAAAGTTTGTT
AATCATAAGATCAAAAATGCCGACCAGGTCTCAGAGGACCAACTTCTGAA
GGGATGCAAAAAATACTGTGACGCACATAACAACGAATTTGAGTTGAGAT
ATTTCTGTACTAATACAGAATGTAAGAAACTCATCTGTTCTGAGTGCAAA
GACAGCAAGAAACACAGAACCCATGAAGTGTTCTTAGCATCTGATGTTCT
GGACGATACCAAAGTTTTGGTGGATGGCAAAATCAACATTGGTAACAATG
CTTCAAAAAACCTCCACGAATTTTTGAAAGTCAGCGAAAAGGTGGTTCAA
CAAAGTGAAGTTGACAAGAACAAGTCCATCTGTGCTATCGAGCAATCCTT
CACTAGCCTGGAGAACATGTTGAAAgagcaaaagaagaaattaatcGAAC
AAATCACACAAAATCATGAAGCTGGTAAGAAGTCACTGGAGAAAGGGAAG
ATTGATGCCAGCACTTTGAGGAAATTGTTGGATTATGCAGCAATGGCGCT
TGATGCAGCTGGGCTGTTTGGTAACATTGAGGTGATAACAGAACTTGGTA
AACAAATCGAGCAAATGTATGAACACTTAGCAGTCGATCAGATCAATGAG
ACAGCTATCACAATCCCTGCTGATGGTGTTGCAGCTAACGAACCAACAGT
TGAAGTGTTTGGTGTTCTAAACACCATCTTCAATCAAAACAAGGGGAATG
TTAGTGTCCAGGTCACCAAAAAGACGGTCACCGCCAAAACTGACGCGCTG
ACCACCATTACCAATACCTGTAAACAAGCTATGGaacttttcaatcaaaa
ttgaATGTTCACTGAAGTgaaaggcaagaaaaaccgcaagaagaaaaacc
ttccaaaagagtttgaacctggagaaaaaaaaGAGGAGATCCCAAACCAT
TTGCTTTGTCCCCAATGCAAGGAAATGTTCGTTATTCCCACTTTACTACC
ATGTATGGACACTTTCTGTCATGAATGCCTCCTTAAATTAATTCCTGAGC
CAGAACCACAAGCAAACAACCAGGCAGCACCACCTGAGGGTAATAACCAA
GCTGTACCACAAGATGGCGCTGCACCGCCAGTCGCTGAGGTTGCGCCGCC
GCCAGTAGAGCCAGTTGTGGAACAGAAGCCACCAGATGTGATGGTAGCGT
GTCCAACTTGTCAGAAGGAAGTCAAGGCAGATACGATTAAAAACGAAGAG
CTTCCTATCCAATATCTCTTCCAAAATGAGATCGAGGCTTACAAATCAAG
GGAAGCAGGTGGGCCTCGTTGTGGAGAATGCATTGAGCAGAACGAGGTTG
TTGGATATTGTATCACGTGCTCATTATCTATGTGTCAAGAATGCCAAAGA
AGCCATCAAAGGTTGACAAAGTTTGTTAATCATAAGATCAAAAATGCCGA
CCAGGTCTCAGAGGACCAACTTCTGAAGGGATGCAAAAAATACTGTGACG
CACATAACAACGAATTTGAGTTGAGATATTTCTGTACTAATACAGAATGT
AAGAAACTCATCTGTTCTGAGTGCAAAGACAGCAAGAAACACAGAACCCA
TGAAGTGTTCTTAGCATCTGATGTTCTGGACGATACCAAAGTTTTGGTGG
ATGGCAAAATCAACATTGGTAACAATGCTTCAAAAAACCTCCACGAATTT
TTGAAAGTCAGCGAAAAGGTGGTTCAACAAAGTGAAGTTGACAAGAACAA
GTCCATCTGTGCTATCGAGCAATCCTTCACTAGCCTGGAGAACATGTTGA
AAgagcaaaagaagaaattaatcGAACAAATCACACAAAATCATGAAGCT
GGTAAGAAGTCACTGGAGAAAGGGAAGATTGATGCCAGCACTTTGAGGAA
ATTGTTGGATTATGCAGCAATGGCGCTTGATGCAGCTGGGCTGTTTGGTA
ACATTGAGGTGATAACAGAACTTGGTAAACAAATCGAGCAAATGTATGAA
CACTTAGCAGTCGATCAGATCAATGAGACAGCTATCACAATCCCTGCTGA
TGGTGTTGCAGCTAACGAACCAACAGTTGAAGTGTTTGGTGTTCTAAACA
CCATCTTCAATCAAAACAAGGGGAATGTTAGTGTCCAGGTCACCAAAAAG
ACGGTCACCGCCAAAACTGACGCGCTGACCACCATTACCAATACCTGTAA
ACAAGCTATGGaacttttcaatcaaaattgaATGTTCACTGAAGTgaaag
gcaagaaaaaccgcaagaagaaaaaccttccaaaagagtttgaacctgga
gaaaaaaaaGAGGAGATCCCAAACCATTTGCTTTGTCCCCAATGCAAGGA
AATGTTCGTTATTCCCACTTTACTACCATGTATGGACACTTTCTGTCATG
AATGCCTCCTTAAATTAATTCCTGAGCCAGAACCACAAGCAAACAACCAG
GCAGCACCACCTGAGGGTAATAACCAAGCTGTACCACAAGATGGCGCTGC
ACCGCCAGTCGCTGAGGTTGCGCCGCCGCCAGTAGAGCCAGTTGTGGAAC
AGAAGCCACCAGATGTGATGGTAGCGTGTCCAACTTGTCAGAAGGAAGTC
AAGGCAGATACGATTAAAAACGAAGAGCTTCCTATCCAATATCTCTTCCA
AAATGAGATCGAGGCTTACAAATCAAGGGAAGCAGGTGGGCCTCGTTGTG
GAGAATGCATTGAGCAGAACGAGGTTGTTGGATATTGTATCACGTGCTCA
TTATCTATGTGTCAAGAATGCCAAAGAAGCCATCAAAGGTTGACAAAGTT
TGTTAATCATAAGATCAAAAATGCCGACCAGGTCTCAGAGGACCAACTTC
TGAAGGGATGCAAAAAATACTGTGACGCACATAACAACGAATTTGAGTTG
AGATATTTCTGTACTAATACAGAATGTAAGAAACTCATCTGTTCTGAGTG
CAAAGACAGCAAGAAACACAGAACCCATGAAGTGTTCTTAGCATCTGATG
TTCTGGACGATACCAAAGTTTTGGTGGATGGCAAAATCAACATTGGTAAC
AATGCTTCAAAAAACCTCCACGAATTTTTGAAAGTCAGCGAAAAGGTGGT
TCAACAAAGTGAAGTTGACAAGAACAAGTCCATCTGTGCTATCGAGCAAT
CCTTCACTAGCCTGGAGAACATGTTGAAAgagcaaaagaagaaattaatc
GAACAAATCACACAAAATCATGAAGCTGGTAAGAAGTCACTGGAGAAAGG
GAAGATTGATGCCAGCACTTTGAGGAAATTGTTGGATTATGCAGCAATGG
CGCTTGATGCAGCTGGGCTGTTTGGTAACATTGAGGTGATAACAGAACTT
GGTAAACAAATCGAGCAAATGTATGAACACTTAGCAGTCGATCAGATCAA
TGAGACAGCTATCACAATCCCTGCTGATGGTGTTGCAGCTAACGAACCAA
CAGTTGAAGTGTTTGGTGTTCTAAACACCATCTTCAATCAAAACAAGGGG
AATGTTAGTGTCCAGGTCACCAAAAAGACGGTCACCGCCAAAACTGACGC
GCTGACCACCATTACCAATACCTGTAAACAAGCTATGGaacttttcaatc
aaaattgaATGTTCACTGAAGTgaaaggcaagaaaaaccgcaagaagaaa
aaccttccaaaagagtttgaacctggagaaaaaaaaGAGGAGATCCCAAA
CCATTTGCTTTGTCCCCAATGCAAGGAAATGTTCGTTATTCCCACTTTAC
TACCATGTATGGACACTTTCTGTCATGAATGCCTCCTTAAATTAATTCCT
GAGCCAGAACCACAAGCAAACAACCAGGCAGCACCACCTGAGGGTAATAA
CCAAGCTGTACCACAAGATGGCGCTGCACCGCCAGTCGCTGAGGTTGCGC
CGCCGCCAGTAGAGCCAGTTGTGGAACAGAAGCCACCAGATGTGATGGTA
GCGTGTCCAACTTGTCAGAAGGAAGTCAAGGCAGATACGATTAAAAACGA
AGAGCTTCCTATCCAATATCTCTTCCAAAATGAGATCGAGGCTTACAAAT
CAAGGGAAGCAGGTGGGCCTCGTTGTGGAGAATGCATTGAGCAGAACGAG
GTTGTTGGATATTGTATCACGTGCTCATTATCTATGTGTCAAGAATGCCA
AAGAAGCCATCAAAGGTTGACAAAGTTTGTTAATCATAAGATCAAAAATG
CCGACCAGGTCTCAGAGGACCAACTTCTGAAGGGATGCAAAAAATACTGT
GACGCACATAACAACGAATTTGAGTTGAGATATTTCTGTACTAATACAGA
ATGTAAGAAACTCATCTGTTCTGAGTGCAAAGACAGCAAGAAACACAGAA
CCCATGAAGTGTTCTTAGCATCTGATGTTCTGGACGATACCAAAGTTTTG
GTGGATGGCAAAATCAACATTGGTAACAATGCTTCAAAAAACCTCCACGA
ATTTTTGAAAGTCAGCGAAAAGGTGGTTCAACAAAGTGAAGTTGACAAGA
ACAAGTCCATCTGTGCTATCGAGCAATCCTTCACTAGCCTGGAGAACATG
TTGAAAgagcaaaagaagaaattaatcGAACAAATCACACAAAATCATGA
AGCTGGTAAGAAGTCACTGGAGAAAGGGAAGATTGATGCCAGCACTTTGA
GGAAATTGTTGGATTATGCAGCAATGGCGCTTGATGCAGCTGGGCTGTTT
GGTAACATTGAGGTGATAACAGAACTTGGTAAACAAATCGAGCAAATGTA
TGAACACTTAGCAGTCGATCAGATCAATGAGACAGCTATCACAATCCCTG
CTGATGGTGTTGCAGCTAACGAACCAACAGTTGAAGTGTTTGGTGTTCTA
AACACCATCTTCAATCAAAACAAGGGGAATGTTAGTGTCCAGGTCACCAA
AAAGACGGTCACCGCCAAAACTGACGCGCTGACCACCATTACCAATACCT
GTAAACAAGCTATGGaacttttcaatcaaaattga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:134790..138053 + |
|
