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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:88272..90771+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11807.1.p1 ID=MSTRG.11807.1.p1|Name=MSTRG.11807.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2500bp|location=Sequence derived from alignment at sc0000087_pilon:88272..90771+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTCTTGTCTTTACTCGACTGGAAGACCTTGGATTGTAAAGTATTCT
TTTTGTTGTCGTTTCCTAGAAGGTCGACTGTGTAGTGGTGAGCTGACGAT
TATGCAATAAATTgatcaaatatttgattttatttggaaatcttatttga
aaaaaaagttgcttAGTCGAACCAATGCTTTGCAGTATTCATAGAAAATT
CGTTagatttttgcagatttttgcaaatttttggaaaaggcAGAACAGTT
AACACTATCTGTGGATGTCAACAATGGAAGACGATGAAGGTTGTGGttat
aaacaaaattaaccaCTGGTTCTTCTGGATGACTTTGATATCCCTCTCCA
AATACGTTGGTATCCCAAGCATAGGTAAGTTCATTTTTAAAACAGCGAAT
ATTCGATATTGTTAGCTTCATGTATTCAAATCaaatttccttttcaaaat
gtttacaaaatacGAAGTAGGAGTACAAAGTCGGTTATCAAAATGGttgg
ttgaaaataaaattcggCTCGCAAACTGATTATATGTAACTGAAGTTATT
AGAAATTTGTCTTATACTGCCGTGCCAATTCGATCTTATTTCAAGTACTA
ACCAACATTGTGTGGATAAAGGGCTTTTAAAGTATgaaaatacagtggag
tctccataactcgaacacgcacggggaacacacaACTTTTTTCGATTTGA
GGAAAATTCCGATTTATGGAGATTGGTTTATATAGCATTGTTAACTGAGG
Gaaccagaaaacttgttcgagttaaggagacattcgagttaaagatgttc
gagttatgaaggcCTCCACTGTATATTGCCTTAATTTAACTTTCTTATAG
TATGTCCTTATAAAGACTTCAAAGATATCTATAAAATGGATCGAGAGATA
TCTGAACGAATCAAAGAATTCGAATACAGTTTAAAGAATAAAGACGTTAT
GCAACGGAAATTCGAACTCAAAATGGCTGGCAGCATATCTGAAGGAGGTT
TCTCTGCACGTTTTTTCAAGGCTACCAAACAAAAAGCTCTCGAGTTGGAT
ATAGAATTTATTTtcgttcaaatttcaaaacccAGCAAATCATGTGTCCA
AGAGATCAGTGAAAAGCCTGGTTTTGTGCGAATCAAGCTTAGTGGAGATT
GCCAGAATTTAACAGTTCCGGATAAAAGCAAAACCAAGGACCATTTAAAA
GAGGTTAAACTTTCAGAAGATGGTTATATCAAAACCTTCTCCCTCAAAGA
AAATTGGCTTGATAGTATATTTCATTTTAGCACCAAGCgacttaaaaaat
caaaaaaaggcaTACAATGGTTAATAGCGTTTATTTTGAATGTTCCACTC
TCAAAAATTACAATCAGTAATCCATTTCGGAAGATTTCAAAAGCTGTTTG
TGAGGTAGCATATGATGTAGAGTATGCAAATCAAAAGTGGACTTTATCCT
CTGATGTTTCAATCATAATGCGAGTTGACTGGAAGCCGAGATATCTGTTG
GAATGGGAGAAACAAAAACGAAACTGGCCTTCAAATGTACCAGCCTATTT
GGTAAAGGAGGAGAGTTTCATCATAGCCAAACCTTCGTCCGCCGATCGAG
ATAACGTGGATACAACTGAATTCAGGTATTCATTCGGACATGTGGAGAGA
AAGCTTGTCTCCTTACAGACACCTACTCAAAGAATAGTCTACATGATTTT
CAAATCTATTTTCTACAAACATATTGTGCCATTGGATAGTGAAAAAATTA
GCTCATTTCTTGCAAAGTCGGTAATGTTCGACACATGTGAGAATATACCA
TCTGATGATAAAAGTTTTTGGAGTTCCGATGTTGAAAATATTCGAAGAGT
TGTACTCTACTTGTTAGACAAACTTCAAGAAGGGTGCATCAAAGGTTTTT
CACCCTACTTATTTATCCCAGGAATCAACATCCTAGAAAATTACGATGTA
GATTTACTGAGTAAAATGATTGATCAAATAGAATATTTGAAGGAAAACTT
TGACGAGATATTGTTAAACACTGCACGAGAGCGTAAAGAGTTGATAGTGT
TATTGAAAAATGCTCGAAATGCTTTAGCTCAtgtcaaagagaaaataaac
tTTATCTTCTCAACGAACGAATTGAATTTAGAGAGATTATTGCGTCCTGG
AATAATAACATTCCGCGAAGATTTCATATTTGAAAGTAAGGACGAATCAG
ACAATATGGTTCTTGACGACGATGGTTTTTCTTTTGTCTaagaaatttca
atgttttttccaTCATACATTAAATGTTGTATGGTAGAATGGATCTTAAA
TAAATTGATGTCCATTATAAAGCATCGATAATTGTGTTCCAATTGAACAG
GCACTACCATACTTATTTATTATATAATCCCCTGGAATTTTGGCAGTGGC
ACGGCTGCTCTTATTTAAACATGATTTTTAGGCTTATGTTCATAAAGTAT
TTTCAACGCATATTTAAAATTAccatttttttaccatttttgaaatctga
Coding sequence (CDS) from alignment at sc0000087_pilon:88272..90771+ >MSTRG.11807.1.p1 ID=MSTRG.11807.1.p1|Name=MSTRG.11807.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2964bp|location=Sequence derived from alignment at sc0000087_pilon:88272..90771+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGTTGTGGttataaacaaaattaaccaCTGGTTCTTCTGGATGAC
TTTGATATCCCTCTCCAAATACGTTGGTATCCCAAGCATAGTATGTCCTT
ATAAAGACTTCAAAGATATCTATAAAATGGATCGAGAGATATCTGAACGA
ATCAAAGAATTCGAATACAGTTTAAAGAATAAAGACGTTATGCAACGGAA
ATTCGAACTCAAAATGGCTGGCAGCATATCTGAAGGAGGTTTCTCTGCAC
GTTTTTTCAAGGCTACCAAACAAAAAGCTCTCGAGTTGGATATAGAATTT
ATTTtcgttcaaatttcaaaacccAGCAAATCATGTGTCCAAGAGATCAG
TGAAAAGCCTGGTTTTGTGCGAATCAAGCTTAGTGGAGATTGCCAGAATT
TAACAGTTCCGGATAAAAGCAAAACCAAGGACCATTTAAAAGAGGTTAAA
CTTTCAGAAGATGGTTATATCAAAACCTTCTCCCTCAAAGAAAATTGGCT
TGATAGTATATTTCATTTTAGCACCAAGCgacttaaaaaatcaaaaaaag
gcaTACAATGGTTAATAGCGTTTATTTTGAATGTTCCACTCTCAAAAATT
ACAATCAGTAATCCATTTCGGAAGATTTCAAAAGCTGTTTGTGAGGTAGC
ATATGATGTAGAGTATGCAAATCAAAAGTGGACTTTATCCTCTGATGTTT
CAATCATAATGCGAGTTGACTGGAAGCCGAGATATCTGTTGGAATGGGAG
AAACAAAAACGAAACTGGCCTTCAAATGTACCAGCCTATTTGGTAAAGGA
GGAGAGTTTCATCATAGCCAAACCTTCGTCCGCCGATCGAGATAACGTGG
ATACAACTGAATTCAGGTATTCATTCGGACATGTGGAGAGAAAGCTTGTC
TCCTTACAGACACCTACTCAAAGAATAGTCTACATGATTTTCAAATCTAT
TTTCTACAAACATATTGTGCCATTGGATAGTGAAAAAATTAGCTCATTTC
TTGCAAAGTCGGTAATGTTCGACACATGTGAGAATATACCATCTGATGAT
AAAAGTTTTTGGAGTTCCGATGTTGAAAATATTCGAAGAGTTGTACTCTA
CTTGTTAGACAAACTTCAAGAAGGGTGCATCAAAGGTTTTTCACCCTACT
TATTTATCCCAGGAATCAACATCCTAGAAAATTACGATGTAGATTTACTG
AGTAAAATGATTGATCAAATAGAATATTTGAAGGAAAACTTTGACGAGAT
ATTGTTAAACACTGCACGAGAGCGTAAAGAGTTGATAGTGTTATTGAAAA
ATGCTCGAAATGCTTTAGCTCAtgtcaaagagaaaataaactTTATCTTC
TCAACGAACGAATTGAATTTAGAGAGATTATTGCGTCCTGGAATAATAAC
ATTCCGCGAAGATTTCATATTTGAAAGTAAGGACGAATCAGACAATATGG
TTCTTGACGACGATGGTTTTTCTTTTGTCTaaATGAAGGTTGTGGttata
aacaaaattaaccaCTGGTTCTTCTGGATGACTTTGATATCCCTCTCCAA
ATACGTTGGTATCCCAAGCATAGTATGTCCTTATAAAGACTTCAAAGATA
TCTATAAAATGGATCGAGAGATATCTGAACGAATCAAAGAATTCGAATAC
AGTTTAAAGAATAAAGACGTTATGCAACGGAAATTCGAACTCAAAATGGC
TGGCAGCATATCTGAAGGAGGTTTCTCTGCACGTTTTTTCAAGGCTACCA
AACAAAAAGCTCTCGAGTTGGATATAGAATTTATTTtcgttcaaatttca
aaacccAGCAAATCATGTGTCCAAGAGATCAGTGAAAAGCCTGGTTTTGT
GCGAATCAAGCTTAGTGGAGATTGCCAGAATTTAACAGTTCCGGATAAAA
GCAAAACCAAGGACCATTTAAAAGAGGTTAAACTTTCAGAAGATGGTTAT
ATCAAAACCTTCTCCCTCAAAGAAAATTGGCTTGATAGTATATTTCATTT
TAGCACCAAGCgacttaaaaaatcaaaaaaaggcaTACAATGGTTAATAG
CGTTTATTTTGAATGTTCCACTCTCAAAAATTACAATCAGTAATCCATTT
CGGAAGATTTCAAAAGCTGTTTGTGAGGTAGCATATGATGTAGAGTATGC
AAATCAAAAGTGGACTTTATCCTCTGATGTTTCAATCATAATGCGAGTTG
ACTGGAAGCCGAGATATCTGTTGGAATGGGAGAAACAAAAACGAAACTGG
CCTTCAAATGTACCAGCCTATTTGGTAAAGGAGGAGAGTTTCATCATAGC
CAAACCTTCGTCCGCCGATCGAGATAACGTGGATACAACTGAATTCAGGT
ATTCATTCGGACATGTGGAGAGAAAGCTTGTCTCCTTACAGACACCTACT
CAAAGAATAGTCTACATGATTTTCAAATCTATTTTCTACAAACATATTGT
GCCATTGGATAGTGAAAAAATTAGCTCATTTCTTGCAAAGTCGGTAATGT
TCGACACATGTGAGAATATACCATCTGATGATAAAAGTTTTTGGAGTTCC
GATGTTGAAAATATTCGAAGAGTTGTACTCTACTTGTTAGACAAACTTCA
AGAAGGGTGCATCAAAGGTTTTTCACCCTACTTATTTATCCCAGGAATCA
ACATCCTAGAAAATTACGATGTAGATTTACTGAGTAAAATGATTGATCAA
ATAGAATATTTGAAGGAAAACTTTGACGAGATATTGTTAAACACTGCACG
AGAGCGTAAAGAGTTGATAGTGTTATTGAAAAATGCTCGAAATGCTTTAG
CTCAtgtcaaagagaaaataaactTTATCTTCTCAACGAACGAATTGAAT
TTAGAGAGATTATTGCGTCCTGGAATAATAACATTCCGCGAAGATTTCAT
ATTTGAAAGTAAGGACGAATCAGACAATATGGTTCTTGACGACGATGGTT
TTTCTTTTGTCTaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:88272..90771 + |
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