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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:58190..60940+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11804.1.p1 ID=MSTRG.11804.1.p1|Name=MSTRG.11804.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2751bp|location=Sequence derived from alignment at sc0000087_pilon:58190..60940+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCAGGTTAGtataataaattttcttttctttttatgctGTTATTCATTG
GCCCTACTCACTAAGAATAAGATACAGCAATCGGTATCAATAATTGTTTT
AGTATGTTAAGAGctgatttaaaaaactttttgaagtgAAGCTCGATTAA
TTTTGACCCATTCATTTTTTATGTGATCTGAACCTAAGAAGCTGCTAAAT
AAAGATTATAacttatttcaaaatctttacaaaatCATATTAATATATCA
TTTACTAATTAAAGTAATGTAAAGAAAATAAACTGATCATCaagataaaa
tatttgttacaaAGTGGTAGCAAGTAATTATTGATCACAAATTAttgttt
tggaaaataaaatgtgCTGTACCGGTATGTCAGCAAACACCAGCACTCAA
GGAAAAGCAATGAGCAGGGAACGTTTTTTGAAGACTGCTCAGAGGAAGAA
ATCACtgaataaaaacaaaggagAGCCATGTTGTATGAGAACTGAAGCCC
TGTTAGAGGCTGCTCTAACTCGAATTAGATCTGAATGGAGGAGAGAACGT
GAATGTAGTGAAGAAGATGATTTTCTTGAACCTTccaataagaaaatgaa
attagacAATTATGATATTGATGAATTTGATTTCAATGATGGAaccgaag
aagaagaaatggaGTCATGTTTTGATACATGTACCATGATCAATAATAAA
GAACTTTCGTCGAAAGCGCTCTGGGATGATCCCGAGCAAGTGGAggactt
tttcaaaaaggtttccGCACATGGACATGGTGATAGTAGTAGCAAATGTG
AAAACTCACCTTGCAATGAAGACTCAATAAATAATAACAAATGTTTGAAT
AAGGACATAATGAAATCAAGTGGAACTGTCGACGGAACTTGCACTGCGAT
AGATTTTGGTGATACATTCCTAGACTCTGTTGATGAATTGTCATCAGATT
TACCGGCCTATAATCCTAATTATGATGTTGGCTCATTCACAATCGAGTTT
GACAATATTTACAAAgaactatttcaaaatttcatcggTGTTGATAGTTA
CAGACAGACAGAAACAACTTGCTCGTAGTTAAATTTGAAGCTTTCTTAGA
CAAAATTTGTAATTTATTAGATAATTAGATCTTTGgcaattgaaaaatta
ttgtgTATATATTGCAATTATTTTTAGTGgatgatttttagaatttttgt
tgAAACTCCAAAAAGGTGCCTTCGAAAACCCAATGAATGCAAATAAAAAC
AGACAAATAAACCTGCACTTTCCAAATGCATTTCAATATTGCTTTAGTTT
TACAAGTAATGCTTCTCTAAGTCTTGAGAATTTTAAACAGACTTTAAAAA
GACTCTTTAATTCTTGAGTTTCCATACAGCTTATAATCAAgaaaattttg
gttgaaatttgtttatttttggatTAATTAGTTACTGTAAATAAATTGTT
AATTTATTATTATAGCCattacttttttagttttatttagGAAATTCCAA
GAACTGGAGGTTTTCATATTTTaaattaattatattttattccaTTGGGA
ATGTCAGTTTtagttttaaaatctttttcatagtgtagttttttatgaat
tataaatatcaaaataatactTTTAGAGTTAAAAATTCTGATTGTTTTCT
TaacataaataaataaacattcaaaaatcacCAAAGTCTTTTTAAGACtg
taaaagttttctttttctggGCTGCAAAAGTTTTGCAAGACATTTATTAT
TAGTCTTGTTAttcacaagttttttttaaagagtgaaATAAGGTGacttt
actttttgaaaaaaaattatctatgAATTCTATCATTTTGTCTCTATAGG
GTTATCAATACATTTTGTTGTAAAGTTGTTCCTACTATCTGAATATAGAG
CTTTAATAAAacatttcgttttttttttcatttataattatgctttttaa
gttttattgtaacagaatttttcacctgcttttCTAGTTCCTAGTTTTCA
AAATCTCTGAACAGCCATTTATTGTTAAAGATAGGTATAAATAGATTTTT
TATCCGAAATGTTGGGATAGAGAAAAAATCGTTTAAAAAGGCTgttaata
aaatataatattaaTCCAACAATAGTTgagttttttaaacaaaaaaatga
aaaacctttggtgtttatttttatattatatgaAATATCATCATCTAAAA
CTTCTTAAAATATCTAACATTTCAAATGTTATTCTTTTtactattatttt
ttttgaaccaATGAATATGTATGTAAATAGCATTTTTATTGAtcataact
cgaaaaaaatgtttttttatcaaaatagagaaaaaaagtaATTAACTGCA
TAACTTGTCGAAATAGAACTCTTTTCGTTTTGAAaaagatataataaaaa
aagacagtGATACTGTTTTAATAAACTTTTGTTCCCTCTGAATTTCTACc
aatttgaaaagatattttgtaaacaATCTTTAAATTGTCATTTCCTGAAA
AGATTATTTGCAACTCCTGTGAAGATTTGTTGATTTTAATACTTAATTAC
CTGCATCAAACCGAagtcagatttttttttattcaaacaaaattaccctg
aatataatatttttgacaTGTTTGTTTGTAAGCATTAGGTATTATTAACA
AATCGAATATTACTGCATAATTGGCGGCATCTCAATAATTCATGTATTTG
TTTATTATAATTACGTTAACAACAAAccctaaatttttttcaatatattt
t Coding sequence (CDS) from alignment at sc0000087_pilon:58190..60940+ >MSTRG.11804.1.p1 ID=MSTRG.11804.1.p1|Name=MSTRG.11804.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=717bp|location=Sequence derived from alignment at sc0000087_pilon:58190..60940+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtgCTGTACCGGTATGTCAGCAAACACCAGCACTCAAGGAAAAGCAAT
GAGCAGGGAACGTTTTTTGAAGACTGCTCAGAGGAAGAAATCACtgaata
aaaacaaaggagAGCCATGTTGTATGAGAACTGAAGCCCTGTTAGAGGCT
GCTCTAACTCGAATTAGATCTGAATGGAGGAGAGAACGTGAATGTAGTGA
AGAAGATGATTTTCTTGAACCTTccaataagaaaatgaaattagacAATT
ATGATATTGATGAATTTGATTTCAATGATGGAaccgaagaagaagaaatg
gaGTCATGTTTTGATACATGTACCATGATCAATAATAAAGAACTTTCGTC
GAAAGCGCTCTGGGATGATCCCGAGCAAGTGGAggactttttcaaaaagg
tttccGCACATGGACATGGTGATAGTAGTAGCAAATGTGAAAACTCACCT
TGCAATGAAGACTCAATAAATAATAACAAATGTTTGAATAAGGACATAAT
GAAATCAAGTGGAACTGTCGACGGAACTTGCACTGCGATAGATTTTGGTG
ATACATTCCTAGACTCTGTTGATGAATTGTCATCAGATTTACCGGCCTAT
AATCCTAATTATGATGTTGGCTCATTCACAATCGAGTTTGACAATATTTA
CAAAgaactatttcaaaatttcatcggTGTTGATAGTTACAGACAGACAG
AAACAACTTGCTCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:58190..60940 + |
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