MSTRG.11792.1.p1 (mRNA) -

Overview
NameMSTRG.11792.1.p1
Unique NameMSTRG.11792.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000086_pilon:1114770..1115963+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11792.1.p1 ID=MSTRG.11792.1.p1|Name=MSTRG.11792.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1194bp|location=Sequence derived from alignment at sc0000086_pilon:1114770..1115963+ (Clytia hemisphaerica_ch_hm2_pilon)
AACAtctcattttattttcaaatttgcttAAATACCGAAATGTCTAGATA
TAAAGCATGGCTGTGTGTGAAATTTGGTAGATTTAGAGATCAATGCTTAC
ATTACTTGTGTTTACAGACTTTTCTTAGTGACCGGGTGTCGTCGAAGGGA
GGAATTTGAGAGTGTTTCTTTGGTACACGTCGACtatagtctgattcgca
gacctctGCAAAACCGCAGGTTGTATAAGGAGTACGAATCTGTtactacc
cagctggcacacaacgtcgtttcaacgtttttctaatattcacaacgtcc
atataacgttagatgaacgttgaaacaaagcAGTCTACGTCAACTATTGT
ACGTCGTTCTTGCTCTCgttgcaaattatattgagacagggatTTATCAA
CTAAATTACTTGATCGAAGAAATGAGCACTCTATCGCCGCCTCAGCGTTC
TGGTCGAGTTTATGCTGCTCACACCATTTTACACAACTTCAATAAAGCTA
CCGATAAGTTCGTGTCAATAATTAAGAGATTGATTTTTAAAGATGACGAT
TTCTGtaaagatattgaaaaattcaaagaaaatcctTCTCCTAATGGCAT
AACTTTggcaattcaaaatttctttcaaaaagaagGCGTTTTTCAAGAAG
TTACAAGATCACTTCAAAATACACCAGAATATATATCATTGGATTACAGT
CCCCATGATTTAGACGAATTGCTGTCAAGTGGATACTTGCAATTGAATCT
TGCTAAACAACTAGAAGGTTTACATCATATCTCTCCGACAAGGACAGTTT
CAGAGGTTAGTGTAGATTTAGGACAGACCTCCAATTACCCTTATCATCTA
TCAGAACGTCAAAATGCGATATTCTACAATACGCTTCGATCGTTTAGCTC
ACCCAATGAAAATCAAGATCATAAAGACTGGTGGTCAAGAAAAAGTTGTT
GTTGTTCGGTTTCTCGTTTTGAAGTTGCCGCCAATGtctgcttcttcttc
attttcatcctCTTCGTTGCTTCATTCAACTATTGATCACATACGAGAGA
GAATAATGTCGTAGTCCCTCTTGCCAAAAACATCTTTGTTAGTCAAACGT
TCATTACCTCAACCAGACATCTGTGGAACATTCTACCCTTAGAGATGAAA
CAATATCAATCCCTTTTATCgtttaaaaacaaactcaaaactCG

Coding sequence (CDS) from alignment at sc0000086_pilon:1114770..1115963+

>MSTRG.11792.1.p1 ID=MSTRG.11792.1.p1|Name=MSTRG.11792.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=615bp|location=Sequence derived from alignment at sc0000086_pilon:1114770..1115963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCACTCTATCGCCGCCTCAGCGTTCTGGTCGAGTTTATGCTGCTCA
CACCATTTTACACAACTTCAATAAAGCTACCGATAAGTTCGTGTCAATAA
TTAAGAGATTGATTTTTAAAGATGACGATTTCTGtaaagatattgaaaaa
ttcaaagaaaatcctTCTCCTAATGGCATAACTTTggcaattcaaaattt
ctttcaaaaagaagGCGTTTTTCAAGAAGTTACAAGATCACTTCAAAATA
CACCAGAATATATATCATTGGATTACAGTCCCCATGATTTAGACGAATTG
CTGTCAAGTGGATACTTGCAATTGAATCTTGCTAAACAACTAGAAGGTTT
ACATCATATCTCTCCGACAAGGACAGTTTCAGAGGTTAGTGTAGATTTAG
GACAGACCTCCAATTACCCTTATCATCTATCAGAACGTCAAAATGCGATA
TTCTACAATACGCTTCGATCGTTTAGCTCACCCAATGAAAATCAAGATCA
TAAAGACTGGTGGTCAAGAAAAAGTTGTTGTTGTTCGGTTTCTCGTTTTG
AAGTTGCCGCCAATGtctgcttcttcttcattttcatcctCTTCGTTGCT
TCATTCAACTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11792MSTRG.11792Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11792.1.p1.exon1MSTRG.11792.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11792.1.p1MSTRG.11792.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086_pilongenomesc0000086_pilon:1114770..1115963 +